RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 RPS10P46783 165 aaKnown RBP6.16□□□□□ -1.42
SMARCD2-208ENST00000580054 LINC01620Q4KN68 170 aa6.16□□□□□ -1.42
SMARCD2-208ENST00000580054 C10orf126Q8N4M7 172 aa6.16□□□□□ -1.42
SMARCD2-208ENST00000580054 TRAPPC1Q9Y5R8 145 aa6.16□□□□□ -1.42
SMARCD2-208ENST00000580054 LOC100131303A0A0U1RQF7 123 aa6.15□□□□□ -1.42
SMARCD2-208ENST00000580054 A0A1B0GXF2 115 aa6.15□□□□□ -1.42
SMARCD2-208ENST00000580054 RS1O15537 224 aa6.15□□□□□ -1.42
SMARCD2-208ENST00000580054 APCSP02743 223 aa6.15□□□□□ -1.42
SMARCD2-208ENST00000580054 PPBPP02775 128 aa6.15□□□□□ -1.42
SMARCD2-208ENST00000580054 MGPP08493 103 aa6.15□□□□□ -1.42
SMARCD2-208ENST00000580054 RAB5AP20339 215 aa6.15□□□□□ -1.42
SMARCD2-208ENST00000580054 HNRNPA3P51991 378 aaKnown RBP6.15□□□□□ -1.42
SMARCD2-208ENST00000580054 ZNF56Q15929 161 aa6.15□□□□□ -1.42
SMARCD2-208ENST00000580054 FAM74A4Q5TZK3 123 aa6.15□□□□□ -1.42
SMARCD2-208ENST00000580054 ZFP2Q6ZN57 461 aa6.15□□□□□ -1.42
SMARCD2-208ENST00000580054 C14orf178Q8N769 122 aaPredicted RBP6.15□□□□□ -1.42
SMARCD2-208ENST00000580054 Q9HAA7 133 aa6.15□□□□□ -1.42
SMARCD2-208ENST00000580054 IGHV3-38A0A0C4DH36 116 aa6.14□□□□□ -1.43
SMARCD2-208ENST00000580054 COLCA2A8K830 154 aa6.14□□□□□ -1.43
SMARCD2-208ENST00000580054 MT1HL1P0DM35 61 aa6.14□□□□□ -1.43
SMARCD2-208ENST00000580054 FABP9Q0Z7S8 132 aa6.14□□□□□ -1.43
SMARCD2-208ENST00000580054 FAM104BQ5XKR9 115 aa6.14□□□□□ -1.43
SMARCD2-208ENST00000580054 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.14□□□□□ -1.43
SMARCD2-208ENST00000580054 GATD1Q8NB37 220 aa6.14□□□□□ -1.43
SMARCD2-208ENST00000580054 MRAP2Q96G30 205 aa6.14□□□□□ -1.43
SMARCD2-208ENST00000580054 MRPL18Q9H0U6 180 aaKnown RBP6.14□□□□□ -1.43
SMARCD2-208ENST00000580054 A0A087WWL8 130 aa6.13□□□□□ -1.43
SMARCD2-208ENST00000580054 CKS2P33552 79 aa6.13□□□□□ -1.43
SMARCD2-208ENST00000580054 LINC01556Q5JQF7 62 aa6.13□□□□□ -1.43
SMARCD2-208ENST00000580054 CFAP126Q5VTH2 177 aa6.13□□□□□ -1.43
SMARCD2-208ENST00000580054 TMEM136Q6ZRR5 245 aa6.13□□□□□ -1.43
SMARCD2-208ENST00000580054 YPEL4Q96NS1 127 aa6.13□□□□□ -1.43
SMARCD2-208ENST00000580054 PRADC1Q9BSG0 188 aa6.13□□□□□ -1.43
SMARCD2-208ENST00000580054 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.12□□□□□ -1.43
SMARCD2-208ENST00000580054 C1orf196B1AJZ1 125 aa6.12□□□□□ -1.43
SMARCD2-208ENST00000580054 IBA57-AS1B1ANH7 110 aa6.12□□□□□ -1.43
SMARCD2-208ENST00000580054 LECT2O14960 151 aa6.12□□□□□ -1.43
SMARCD2-208ENST00000580054 RAB4AP20338 218 aa6.12□□□□□ -1.43
SMARCD2-208ENST00000580054 TIRAPP58753 221 aa6.12□□□□□ -1.43
SMARCD2-208ENST00000580054 SH2D6Q7Z4S9 175 aa6.12□□□□□ -1.43
SMARCD2-208ENST00000580054 AMN1Q8IY45 258 aa6.12□□□□□ -1.43
SMARCD2-208ENST00000580054 ORMDL3Q8N138 153 aa6.12□□□□□ -1.43
SMARCD2-208ENST00000580054 LAMTOR2Q9Y2Q5 125 aa6.12□□□□□ -1.43
SMARCD2-208ENST00000580054 TRAV8-6A0A0B4J262 113 aa6.11□□□□□ -1.43
SMARCD2-208ENST00000580054 IGHV3-30P01768 117 aa6.11□□□□□ -1.43
SMARCD2-208ENST00000580054 IGHV3-33P01772 117 aa6.11□□□□□ -1.43
SMARCD2-208ENST00000580054 IGHV3-30-3P0DP02 117 aa6.11□□□□□ -1.43
SMARCD2-208ENST00000580054 IGHV3-30-5P0DP03 117 aa6.11□□□□□ -1.43
SMARCD2-208ENST00000580054 RHOHQ15669 191 aa6.11□□□□□ -1.43
SMARCD2-208ENST00000580054 OR10J3Q5JRS4 329 aa6.11□□□□□ -1.43
SMARCD2-208ENST00000580054 CIRBP-AS1Q8TBR5 109 aa6.11□□□□□ -1.43
SMARCD2-208ENST00000580054 DNAJC30Q96LL9 226 aa6.11□□□□□ -1.43
SMARCD2-208ENST00000580054 JPT2Q9H910 190 aa6.11□□□□□ -1.43
SMARCD2-208ENST00000580054 IGHV3-73A0A0B4J1V6 119 aa6.1□□□□□ -1.43
SMARCD2-208ENST00000580054 TRBV10-1A0A0K0K1A3 114 aa6.1□□□□□ -1.43
SMARCD2-208ENST00000580054 TRBV6-4A0A1B0GX49 114 aa6.1□□□□□ -1.43
SMARCD2-208ENST00000580054 PHOX2AO14813 284 aa6.1□□□□□ -1.43
SMARCD2-208ENST00000580054 GATA1P15976 413 aaPredicted RBP6.1□□□□□ -1.43
SMARCD2-208ENST00000580054 RPL36AP83881 106 aaKnown RBP6.1□□□□□ -1.43
SMARCD2-208ENST00000580054 MRPL51Q4U2R6 128 aaKnown RBP6.1□□□□□ -1.43
SMARCD2-208ENST00000580054 RPL36ALQ969Q0 106 aaKnown RBP6.1□□□□□ -1.43
SMARCD2-208ENST00000580054 PRELID3AQ96N28 172 aa6.1□□□□□ -1.43
SMARCD2-208ENST00000580054 CHAC1Q9BUX1 264 aa6.1□□□□□ -1.43
SMARCD2-208ENST00000580054 SAMD10Q9BYL1 202 aa6.1□□□□□ -1.43
SMARCD2-208ENST00000580054 KIF25-AS1Q9Y6Z4 181 aa6.1□□□□□ -1.43
SMARCD2-208ENST00000580054 D6R8Y8 96 aa6.09□□□□□ -1.43
SMARCD2-208ENST00000580054 TRGC2P03986 189 aa6.09□□□□□ -1.43
SMARCD2-208ENST00000580054 RAB5BP61020 215 aa6.09□□□□□ -1.43
SMARCD2-208ENST00000580054 SUMO4Q6EEV6 95 aa6.09□□□□□ -1.43
SMARCD2-208ENST00000580054 RNF185Q96GF1 192 aa6.09□□□□□ -1.43
SMARCD2-208ENST00000580054 MAP1LC3AQ9H492 121 aa6.09□□□□□ -1.43
SMARCD2-208ENST00000580054 ST20Q9HBF5 79 aa6.09□□□□□ -1.43
SMARCD2-208ENST00000580054 NIT2Q9NQR4 276 aa6.09□□□□□ -1.43
SMARCD2-208ENST00000580054 TCAPO15273 167 aa6.08□□□□□ -1.44
SMARCD2-208ENST00000580054 RPL37AP61513 92 aaKnown RBP6.08□□□□□ -1.44
SMARCD2-208ENST00000580054 KIAA1644Q3SXP7 199 aa6.08□□□□□ -1.44
SMARCD2-208ENST00000580054 LELP1Q5T871 98 aa6.08□□□□□ -1.44
SMARCD2-208ENST00000580054 UFSP1Q6NVU6 142 aa6.08□□□□□ -1.44
SMARCD2-208ENST00000580054 SLC25A29Q8N8R3 303 aa6.08□□□□□ -1.44
SMARCD2-208ENST00000580054 C20orf78Q9BR46 151 aa6.08□□□□□ -1.44
SMARCD2-208ENST00000580054 TM2D2Q9BX73 214 aa6.08□□□□□ -1.44
SMARCD2-208ENST00000580054 M0QY20 66 aa6.07□□□□□ -1.44
SMARCD2-208ENST00000580054 VCYO14598 125 aa6.07□□□□□ -1.44
SMARCD2-208ENST00000580054 TNFRSF6BO95407 300 aa6.07□□□□□ -1.44
SMARCD2-208ENST00000580054 PMCHP20382 165 aa6.07□□□□□ -1.44
SMARCD2-208ENST00000580054 G0S2P27469 103 aa6.07□□□□□ -1.44
SMARCD2-208ENST00000580054 LAGE3Q14657 143 aa6.07□□□□□ -1.44
SMARCD2-208ENST00000580054 TMEM97Q5BJF2 176 aa6.07□□□□□ -1.44
SMARCD2-208ENST00000580054 Q8N3U1 123 aa6.07□□□□□ -1.44
SMARCD2-208ENST00000580054 PRSS3P2Q8NHM4 247 aa6.07□□□□□ -1.44
SMARCD2-208ENST00000580054 KIR2DL4Q99706 377 aa6.07□□□□□ -1.44
SMARCD2-208ENST00000580054 ALKBH7Q9BT30 221 aaPredicted RBP6.07□□□□□ -1.44
SMARCD2-208ENST00000580054 NXT2Q9NPJ8 142 aaKnown RBP6.07□□□□□ -1.44
SMARCD2-208ENST00000580054 TRBV7-3A0A075B6L6 115 aa6.06□□□□□ -1.44
SMARCD2-208ENST00000580054 TRAV26-2A0A0B4J265 109 aa6.06□□□□□ -1.44
SMARCD2-208ENST00000580054 TRBV6-5A0A0K0K1A5 114 aa6.06□□□□□ -1.44
SMARCD2-208ENST00000580054 K7EMI3 77 aa6.06□□□□□ -1.44
SMARCD2-208ENST00000580054 NCR2O95944 276 aa6.06□□□□□ -1.44
SMARCD2-208ENST00000580054 S100A6P06703 90 aa6.06□□□□□ -1.44
SMARCD2-208ENST00000580054 SUMO2P61956 95 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms