RNA–Protein interactions for RNA: ENST00000579339.5

LINC00271-205, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-205ENST00000579339 ISOC2Q96AB3 205 aa17.62■□□□□ 0.41
LINC00271-205ENST00000579339 PRR34Q9NV39 138 aa17.62■□□□□ 0.41
LINC00271-205ENST00000579339 FAM30AQ9NZY2 134 aa17.62■□□□□ 0.41
LINC00271-205ENST00000579339 V9GYV3 84 aa17.62■□□□□ 0.41
LINC00271-205ENST00000579339 AMTP48728 403 aa17.61■□□□□ 0.41
LINC00271-205ENST00000579339 MIAQ16674 131 aa17.61■□□□□ 0.41
LINC00271-205ENST00000579339 FAM74A3Q4VXF1 159 aa17.61■□□□□ 0.41
LINC00271-205ENST00000579339 FRZBQ92765 325 aa17.61■□□□□ 0.41
LINC00271-205ENST00000579339 GFRA4Q9GZZ7 299 aa17.61■□□□□ 0.41
LINC00271-205ENST00000579339 A0A1B0GUT8 65 aa17.6■□□□□ 0.41
LINC00271-205ENST00000579339 HLA-DQA1P01909 254 aa17.6■□□□□ 0.41
LINC00271-205ENST00000579339 PEA15Q15121 130 aa17.6■□□□□ 0.41
LINC00271-205ENST00000579339 ADIRFQ15847 76 aa17.6■□□□□ 0.41
LINC00271-205ENST00000579339 LINC01620Q4KN68 170 aa17.6■□□□□ 0.41
LINC00271-205ENST00000579339 C20orf203Q8NBC4 194 aa17.6■□□□□ 0.41
LINC00271-205ENST00000579339 TMEM70Q9BUB7 260 aa17.6■□□□□ 0.41
LINC00271-205ENST00000579339 IGLV4-60A0A075B6I1 120 aa17.59■□□□□ 0.41
LINC00271-205ENST00000579339 GAS8-AS1O95177 125 aa17.58■□□□□ 0.4
LINC00271-205ENST00000579339 NAT8Q9UHE5 227 aa17.58■□□□□ 0.4
LINC00271-205ENST00000579339 FAM231BA6NCW3 169 aa17.57■□□□□ 0.4
LINC00271-205ENST00000579339 EPM2AB3EWF7 344 aa17.57■□□□□ 0.4
LINC00271-205ENST00000579339 UBE2L6O14933 153 aa17.57■□□□□ 0.4
LINC00271-205ENST00000579339 SMR3BP02814 79 aaPredicted RBP17.57■□□□□ 0.4
LINC00271-205ENST00000579339 REG3AQ06141 175 aa17.56■□□□□ 0.4
LINC00271-205ENST00000579339 NUP35Q8NFH5 326 aa17.56■□□□□ 0.4
LINC00271-205ENST00000579339 VPS13BQ7Z7G8 4022 aa17.55■□□□□ 0.4
LINC00271-205ENST00000579339 IGLV10-54A0A075B6I4 117 aa17.55■□□□□ 0.4
LINC00271-205ENST00000579339 SDHAF1A6NFY7 115 aa17.55■□□□□ 0.4
LINC00271-205ENST00000579339 KRTAP26-1Q6PEX3 210 aa17.55■□□□□ 0.4
LINC00271-205ENST00000579339 RNF185Q96GF1 192 aa17.55■□□□□ 0.4
LINC00271-205ENST00000579339 TMEM191AQ9H0A3 160 aa17.55■□□□□ 0.4
LINC00271-205ENST00000579339 A0A1B0GUV1 79 aa17.54■□□□□ 0.4
LINC00271-205ENST00000579339 USP17L23D6RBM5 183 aa17.54■□□□□ 0.4
LINC00271-205ENST00000579339 AMN1Q8IY45 258 aa17.53■□□□□ 0.4
LINC00271-205ENST00000579339 Q5VSD8 79 aa17.52■□□□□ 0.4
LINC00271-205ENST00000579339 SMDT1Q9H4I9 107 aa17.52■□□□□ 0.4
LINC00271-205ENST00000579339 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.51■□□□□ 0.39
LINC00271-205ENST00000579339 IGKV2-29A2NJV5 120 aaPredicted RBP17.51■□□□□ 0.39
LINC00271-205ENST00000579339 APCSP02743 223 aa17.51■□□□□ 0.39
LINC00271-205ENST00000579339 RAB4AP20338 218 aa17.51■□□□□ 0.39
LINC00271-205ENST00000579339 RIGQ13278 110 aa17.51■□□□□ 0.39
LINC00271-205ENST00000579339 C14orf177Q52M58 125 aa17.51■□□□□ 0.39
LINC00271-205ENST00000579339 TRBV6-5A0A0K0K1A5 114 aa17.5■□□□□ 0.39
LINC00271-205ENST00000579339 NCR2O95944 276 aa17.5■□□□□ 0.39
LINC00271-205ENST00000579339 PMCHP20382 165 aa17.5■□□□□ 0.39
LINC00271-205ENST00000579339 RPS10P46783 165 aaKnown RBP17.5■□□□□ 0.39
LINC00271-205ENST00000579339 NAT8BQ9UHF3 227 aa17.5■□□□□ 0.39
LINC00271-205ENST00000579339 Q6ZSA8 131 aa17.49■□□□□ 0.39
LINC00271-205ENST00000579339 ST20Q9HBF5 79 aa17.49■□□□□ 0.39
LINC00271-205ENST00000579339 SMKR1H3BMG3 65 aa17.48■□□□□ 0.39
LINC00271-205ENST00000579339 I3L3M4 83 aa17.47■□□□□ 0.39
LINC00271-205ENST00000579339 PRSS1P07477 247 aa17.47■□□□□ 0.39
LINC00271-205ENST00000579339 MRAP2Q96G30 205 aa17.47■□□□□ 0.39
LINC00271-205ENST00000579339 TMEM242Q9NWH2 141 aa17.47■□□□□ 0.39
LINC00271-205ENST00000579339 IGKV3OR2-268A0A0C4DH90 116 aa17.46■□□□□ 0.39
LINC00271-205ENST00000579339 SMIM27A0A1W2PRY6 76 aa17.46■□□□□ 0.39
LINC00271-205ENST00000579339 AMMECR1LQ6DCA0 310 aa17.46■□□□□ 0.39
LINC00271-205ENST00000579339 RNASEKQ6P5S7 137 aaKnown RBP17.46■□□□□ 0.39
LINC00271-205ENST00000579339 TRAV8-4A0A0B4J246 113 aa17.45■□□□□ 0.38
LINC00271-205ENST00000579339 TSHBP01222 138 aa17.45■□□□□ 0.38
LINC00271-205ENST00000579339 FGF6P10767 208 aa17.43■□□□□ 0.38
LINC00271-205ENST00000579339 CAMPP49913 170 aa17.43■□□□□ 0.38
LINC00271-205ENST00000579339 POLR2KP53803 58 aaKnown RBP17.42■□□□□ 0.38
LINC00271-205ENST00000579339 H7C423 109 aa17.41■□□□□ 0.38
LINC00271-205ENST00000579339 FAM229AH3BQW9 127 aa17.4■□□□□ 0.38
LINC00271-205ENST00000579339 NRACQ8N912 160 aa17.4■□□□□ 0.38
LINC00271-205ENST00000579339 TRBV27A0A0K0K1C4 114 aa17.39■□□□□ 0.37
LINC00271-205ENST00000579339 ESDP10768 282 aa17.39■□□□□ 0.37
LINC00271-205ENST00000579339 RAB14P61106 215 aa17.39■□□□□ 0.37
LINC00271-205ENST00000579339 MRPL51Q4U2R6 128 aaKnown RBP17.39■□□□□ 0.37
LINC00271-205ENST00000579339 FAM104BQ5XKR9 115 aa17.39■□□□□ 0.37
LINC00271-205ENST00000579339 MRPL54Q6P161 138 aaKnown RBP17.39■□□□□ 0.37
LINC00271-205ENST00000579339 SCXQ7RTU7 201 aa17.39■□□□□ 0.37
LINC00271-205ENST00000579339 GAGE12HA6NDE8 117 aa17.38■□□□□ 0.37
LINC00271-205ENST00000579339 INAFM2P0DMQ5 153 aa17.38■□□□□ 0.37
LINC00271-205ENST00000579339 hDV102S1A0JD36 115 aa17.36■□□□□ 0.37
LINC00271-205ENST00000579339 ZNF25P17030 456 aaPredicted RBP17.35■□□□□ 0.37
LINC00271-205ENST00000579339 SUMO2P61956 95 aaKnown RBP17.35■□□□□ 0.37
LINC00271-205ENST00000579339 DGAT2L7PQ6IED9 249 aa17.35■□□□□ 0.37
LINC00271-205ENST00000579339 CHCHD10Q8WYQ3 142 aaPredicted RBP17.35■□□□□ 0.37
LINC00271-205ENST00000579339 BTF3L4Q96K17 158 aa17.35■□□□□ 0.37
LINC00271-205ENST00000579339 CHAC1Q9BUX1 264 aa17.35■□□□□ 0.37
LINC00271-205ENST00000579339 A0A1B0GW15 77 aa17.34■□□□□ 0.37
LINC00271-205ENST00000579339 VCYO14598 125 aa17.34■□□□□ 0.37
LINC00271-205ENST00000579339 CLRN3Q8NCR9 226 aa17.34■□□□□ 0.37
LINC00271-205ENST00000579339 TMEM101Q96IK0 257 aa17.34■□□□□ 0.37
LINC00271-205ENST00000579339 A0A1B0GXF2 115 aa17.33■□□□□ 0.36
LINC00271-205ENST00000579339 C7orf77A4D0Y5 90 aa17.33■□□□□ 0.36
LINC00271-205ENST00000579339 PPP1R17O96001 155 aa17.33■□□□□ 0.36
LINC00271-205ENST00000579339 FCER1GP30273 86 aa17.33■□□□□ 0.36
LINC00271-205ENST00000579339 HBBP68871 147 aa17.33■□□□□ 0.36
LINC00271-205ENST00000579339 LINC00528Q8N1L1 170 aa17.33■□□□□ 0.36
LINC00271-205ENST00000579339 OR5A1Q8NGJ0 315 aa17.33■□□□□ 0.36
LINC00271-205ENST00000579339 C9orf163Q8N9P6 203 aa17.32■□□□□ 0.36
LINC00271-205ENST00000579339 CIRBP-AS1Q8TBR5 109 aa17.32■□□□□ 0.36
LINC00271-205ENST00000579339 CKS2P33552 79 aa17.31■□□□□ 0.36
LINC00271-205ENST00000579339 C15orf56Q8N910 161 aa17.31■□□□□ 0.36
LINC00271-205ENST00000579339 SRRM2Q9UQ35 2752 aaKnown RBP17.31■□□□□ 0.36
LINC00271-205ENST00000579339 MYCBP2O75592 4640 aa17.3■□□□□ 0.36
LINC00271-205ENST00000579339 FLG2Q5D862 2391 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 171.8 ms