RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 CLRN3Q8NCR9 226 aa7.48□□□□□ -1.21
SSH2-208ENST00000579040 OCC1Q8TAD7 63 aa7.48□□□□□ -1.21
SSH2-208ENST00000579040 AMTP48728 403 aa7.47□□□□□ -1.21
SSH2-208ENST00000579040 C9orf163Q8N9P6 203 aa7.47□□□□□ -1.21
SSH2-208ENST00000579040 RNASE7Q9H1E1 156 aaKnown RBP7.47□□□□□ -1.21
SSH2-208ENST00000579040 IGLV4-60A0A075B6I1 120 aa7.46□□□□□ -1.22
SSH2-208ENST00000579040 KRTAP29-1A8MX34 341 aaPredicted RBP7.46□□□□□ -1.22
SSH2-208ENST00000579040 J3QL48 77 aa7.46□□□□□ -1.22
SSH2-208ENST00000579040 UBE2L6O14933 153 aa7.46□□□□□ -1.22
SSH2-208ENST00000579040 TEX261Q6UWH6 196 aa7.46□□□□□ -1.22
SSH2-208ENST00000579040 FAM231DQ6ZW35 169 aa7.46□□□□□ -1.22
SSH2-208ENST00000579040 SMIM15Q7Z3B0 74 aa7.46□□□□□ -1.22
SSH2-208ENST00000579040 LYPD6BQ8NI32 183 aa7.46□□□□□ -1.22
SSH2-208ENST00000579040 IGLV10-54A0A075B6I4 117 aa7.45□□□□□ -1.22
SSH2-208ENST00000579040 A8MWL6 223 aa7.45□□□□□ -1.22
SSH2-208ENST00000579040 KRTAP10-4P60372 401 aaPredicted RBP7.45□□□□□ -1.22
SSH2-208ENST00000579040 CNBPP62633 177 aaKnown RBP7.45□□□□□ -1.22
SSH2-208ENST00000579040 ALKAL2Q6UX46 152 aa7.45□□□□□ -1.22
SSH2-208ENST00000579040 GATD1Q8NB37 220 aa7.45□□□□□ -1.22
SSH2-208ENST00000579040 GTSF1Q8WW33 167 aa7.45□□□□□ -1.22
SSH2-208ENST00000579040 MYCBP2O75592 4640 aa7.45□□□□□ -1.22
SSH2-208ENST00000579040 GATCO43716 136 aaKnown RBP7.44□□□□□ -1.22
SSH2-208ENST00000579040 NDUFS6O75380 124 aaKnown RBP7.44□□□□□ -1.22
SSH2-208ENST00000579040 NCR2O95944 276 aa7.44□□□□□ -1.22
SSH2-208ENST00000579040 CT83Q5H943 113 aa7.44□□□□□ -1.22
SSH2-208ENST00000579040 GFRA4Q9GZZ7 299 aa7.44□□□□□ -1.22
SSH2-208ENST00000579040 DNAH8Q96JB1 4490 aa7.44□□□□□ -1.22
SSH2-208ENST00000579040 TRAV26-2A0A0B4J265 109 aa7.43□□□□□ -1.22
SSH2-208ENST00000579040 hDV102S1A0JD36 115 aa7.43□□□□□ -1.22
SSH2-208ENST00000579040 H7C423 109 aa7.43□□□□□ -1.22
SSH2-208ENST00000579040 SDIM1Q6ZPB5 146 aa7.43□□□□□ -1.22
SSH2-208ENST00000579040 AP5S1Q9NUS5 200 aa7.43□□□□□ -1.22
SSH2-208ENST00000579040 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.42□□□□□ -1.22
SSH2-208ENST00000579040 FOXA3P55318 350 aaPredicted RBP7.42□□□□□ -1.22
SSH2-208ENST00000579040 BORCS7Q96B45 105 aa7.42□□□□□ -1.22
SSH2-208ENST00000579040 RPL39LQ96EH5 51 aaKnown RBP7.42□□□□□ -1.22
SSH2-208ENST00000579040 TRBV6-5A0A0K0K1A5 114 aa7.41□□□□□ -1.22
SSH2-208ENST00000579040 SDHAF1A6NFY7 115 aa7.41□□□□□ -1.22
SSH2-208ENST00000579040 APCSP02743 223 aa7.41□□□□□ -1.22
SSH2-208ENST00000579040 RPL37AP61513 92 aaKnown RBP7.41□□□□□ -1.22
SSH2-208ENST00000579040 CIRBPQ14011 172 aaKnown RBP7.41□□□□□ -1.22
SSH2-208ENST00000579040 AMMECR1LQ6DCA0 310 aa7.41□□□□□ -1.22
SSH2-208ENST00000579040 CFAP161Q6P656 301 aa7.41□□□□□ -1.22
SSH2-208ENST00000579040 FAM210AQ96ND0 272 aa7.41□□□□□ -1.22
SSH2-208ENST00000579040 SMIM7Q9BQ49 75 aa7.41□□□□□ -1.22
SSH2-208ENST00000579040 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.41□□□□□ -1.22
SSH2-208ENST00000579040 HERC1Q15751 4861 aa7.41□□□□□ -1.22
SSH2-208ENST00000579040 IGHV3-64A0A075B6Q5 118 aa7.4□□□□□ -1.22
SSH2-208ENST00000579040 FAM231BA6NCW3 169 aa7.4□□□□□ -1.22
SSH2-208ENST00000579040 OXTP01178 125 aa7.4□□□□□ -1.22
SSH2-208ENST00000579040 ZNF25P17030 456 aaPredicted RBP7.4□□□□□ -1.22
SSH2-208ENST00000579040 CEBPGP53567 150 aa7.4□□□□□ -1.22
SSH2-208ENST00000579040 LINC01551Q86U37 167 aa7.4□□□□□ -1.22
SSH2-208ENST00000579040 KRTAP3-3Q9BYR6 98 aa7.4□□□□□ -1.22
SSH2-208ENST00000579040 KRTAP3-2Q9BYR7 98 aa7.4□□□□□ -1.22
SSH2-208ENST00000579040 EIF5A2Q9GZV4 153 aaKnown RBP7.4□□□□□ -1.22
SSH2-208ENST00000579040 A0A1B0GUT8 65 aa7.39□□□□□ -1.23
SSH2-208ENST00000579040 GAGE12HA6NDE8 117 aa7.39□□□□□ -1.23
SSH2-208ENST00000579040 I3L3M4 83 aa7.39□□□□□ -1.23
SSH2-208ENST00000579040 FGF6P10767 208 aa7.39□□□□□ -1.23
SSH2-208ENST00000579040 RNASEKQ6P5S7 137 aaKnown RBP7.39□□□□□ -1.23
SSH2-208ENST00000579040 TSKUQ8WUA8 353 aa7.39□□□□□ -1.23
SSH2-208ENST00000579040 RNF185Q96GF1 192 aa7.39□□□□□ -1.23
SSH2-208ENST00000579040 OSTCQ9NRP0 149 aa7.39□□□□□ -1.23
SSH2-208ENST00000579040 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.38□□□□□ -1.23
SSH2-208ENST00000579040 IGKV2-29A2NJV5 120 aaPredicted RBP7.38□□□□□ -1.23
SSH2-208ENST00000579040 ZNF727A8MUV8 499 aa7.38□□□□□ -1.23
SSH2-208ENST00000579040 HIGD1CA8MV81 97 aa7.38□□□□□ -1.23
SSH2-208ENST00000579040 PANO1I0J062 215 aa7.38□□□□□ -1.23
SSH2-208ENST00000579040 PMCHP20382 165 aa7.38□□□□□ -1.23
SSH2-208ENST00000579040 C15orf56Q8N910 161 aa7.38□□□□□ -1.23
SSH2-208ENST00000579040 TMEM191AQ9H0A3 160 aa7.38□□□□□ -1.23
SSH2-208ENST00000579040 ST20Q9HBF5 79 aa7.38□□□□□ -1.23
SSH2-208ENST00000579040 IGKV3OR2-268A0A0C4DH90 116 aa7.37□□□□□ -1.23
SSH2-208ENST00000579040 SLPIP03973 132 aa7.37□□□□□ -1.23
SSH2-208ENST00000579040 OR5A1Q8NGJ0 315 aa7.37□□□□□ -1.23
SSH2-208ENST00000579040 CHCHD10Q8WYQ3 142 aaPredicted RBP7.37□□□□□ -1.23
SSH2-208ENST00000579040 MRAP2Q96G30 205 aa7.37□□□□□ -1.23
SSH2-208ENST00000579040 BTF3L4Q96K17 158 aa7.37□□□□□ -1.23
SSH2-208ENST00000579040 GVQW2A0A096LPI5 108 aaPredicted RBP7.36□□□□□ -1.23
SSH2-208ENST00000579040 TSHBP01222 138 aa7.36□□□□□ -1.23
SSH2-208ENST00000579040 SRP19P09132 144 aaKnown RBP7.36□□□□□ -1.23
SSH2-208ENST00000579040 ESDP10768 282 aa7.36□□□□□ -1.23
SSH2-208ENST00000579040 SPACA4Q8TDM5 124 aa7.36□□□□□ -1.23
SSH2-208ENST00000579040 TMEM101Q96IK0 257 aa7.36□□□□□ -1.23
SSH2-208ENST00000579040 TRBV27A0A0K0K1C4 114 aa7.35□□□□□ -1.23
SSH2-208ENST00000579040 RAB4AP20338 218 aa7.35□□□□□ -1.23
SSH2-208ENST00000579040 RPS10P46783 165 aaKnown RBP7.35□□□□□ -1.23
SSH2-208ENST00000579040 POLR2KP53803 58 aaKnown RBP7.35□□□□□ -1.23
SSH2-208ENST00000579040 RIGQ13278 110 aa7.35□□□□□ -1.23
SSH2-208ENST00000579040 FAM74A3Q4VXF1 159 aa7.35□□□□□ -1.23
SSH2-208ENST00000579040 MRPL52Q86TS9 123 aaKnown RBP7.35□□□□□ -1.23
SSH2-208ENST00000579040 TMEM242Q9NWH2 141 aa7.35□□□□□ -1.23
SSH2-208ENST00000579040 V9GYV3 84 aa7.35□□□□□ -1.23
SSH2-208ENST00000579040 A0A087WYN8 130 aa7.34□□□□□ -1.23
SSH2-208ENST00000579040 GAS8-AS1O95177 125 aa7.34□□□□□ -1.23
SSH2-208ENST00000579040 PPP1R17O96001 155 aa7.34□□□□□ -1.23
SSH2-208ENST00000579040 FOXI1Q12951 378 aa7.34□□□□□ -1.23
SSH2-208ENST00000579040 SERTAD4-AS1Q5TG53 156 aa7.34□□□□□ -1.23
SSH2-208ENST00000579040 DPH3Q96FX2 82 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms