RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 IGLV10-54A0A075B6I4 117 aa10.28□□□□□ -0.76
CRLF3-203ENST00000578692 BLOC1S1P78537 153 aa10.28□□□□□ -0.76
CRLF3-203ENST00000578692 AKAP14Q86UN6 197 aa10.28□□□□□ -0.76
CRLF3-203ENST00000578692 TRAV8-4A0A0B4J246 113 aa10.27□□□□□ -0.76
CRLF3-203ENST00000578692 J3QL48 77 aa10.27□□□□□ -0.76
CRLF3-203ENST00000578692 COTL1Q14019 142 aa10.27□□□□□ -0.76
CRLF3-203ENST00000578692 ALKAL2Q6UX46 152 aa10.27□□□□□ -0.76
CRLF3-203ENST00000578692 C9orf163Q8N9P6 203 aa10.27□□□□□ -0.76
CRLF3-203ENST00000578692 CLRN3Q8NCR9 226 aa10.27□□□□□ -0.76
CRLF3-203ENST00000578692 hCG_2014768A0A024R1R8 64 aa10.26□□□□□ -0.77
CRLF3-203ENST00000578692 TMEM250H0YL14 139 aa10.26□□□□□ -0.77
CRLF3-203ENST00000578692 UBE2L6O14933 153 aa10.26□□□□□ -0.77
CRLF3-203ENST00000578692 GATD1Q8NB37 220 aa10.26□□□□□ -0.77
CRLF3-203ENST00000578692 GTSF1Q8WW33 167 aa10.26□□□□□ -0.77
CRLF3-203ENST00000578692 GATCO43716 136 aaKnown RBP10.26□□□□□ -0.77
CRLF3-203ENST00000578692 AMTP48728 403 aa10.26□□□□□ -0.77
CRLF3-203ENST00000578692 SMIM15Q7Z3B0 74 aa10.26□□□□□ -0.77
CRLF3-203ENST00000578692 GFRA4Q9GZZ7 299 aa10.26□□□□□ -0.77
CRLF3-203ENST00000578692 DMBT1Q9UGM3 2413 aaPredicted RBP10.25□□□□□ -0.77
CRLF3-203ENST00000578692 TRAV26-2A0A0B4J265 109 aa10.25□□□□□ -0.77
CRLF3-203ENST00000578692 LYPD6BQ8NI32 183 aa10.25□□□□□ -0.77
CRLF3-203ENST00000578692 A8MWL6 223 aa10.24□□□□□ -0.77
CRLF3-203ENST00000578692 KRTAP29-1A8MX34 341 aaPredicted RBP10.24□□□□□ -0.77
CRLF3-203ENST00000578692 FOXA3P55318 350 aaPredicted RBP10.24□□□□□ -0.77
CRLF3-203ENST00000578692 KRTAP10-4P60372 401 aaPredicted RBP10.24□□□□□ -0.77
CRLF3-203ENST00000578692 FAM231DQ6ZW35 169 aa10.24□□□□□ -0.77
CRLF3-203ENST00000578692 LOC100996750A0A140TA64 210 aa10.23□□□□□ -0.77
CRLF3-203ENST00000578692 CEBPGP53567 150 aa10.23□□□□□ -0.77
CRLF3-203ENST00000578692 RPL39LQ96EH5 51 aaKnown RBP10.23□□□□□ -0.77
CRLF3-203ENST00000578692 KRTAP4-6Q9BYQ5 205 aa10.23□□□□□ -0.77
CRLF3-203ENST00000578692 A0A1B0GVG6 124 aa10.22□□□□□ -0.77
CRLF3-203ENST00000578692 hDV102S1A0JD36 115 aa10.22□□□□□ -0.77
CRLF3-203ENST00000578692 TEX261Q6UWH6 196 aa10.22□□□□□ -0.77
CRLF3-203ENST00000578692 SDIM1Q6ZPB5 146 aa10.22□□□□□ -0.77
CRLF3-203ENST00000578692 EIF5A2Q9GZV4 153 aaKnown RBP10.21□□□□□ -0.78
CRLF3-203ENST00000578692 NCR2O95944 276 aa10.2□□□□□ -0.78
CRLF3-203ENST00000578692 CNBPP62633 177 aaKnown RBP10.2□□□□□ -0.78
CRLF3-203ENST00000578692 CT83Q5H943 113 aa10.2□□□□□ -0.78
CRLF3-203ENST00000578692 AP5S1Q9NUS5 200 aa10.2□□□□□ -0.78
CRLF3-203ENST00000578692 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.2□□□□□ -0.78
CRLF3-203ENST00000578692 IGKV3OR2-268A0A0C4DH90 116 aa10.19□□□□□ -0.78
CRLF3-203ENST00000578692 SDHAF1A6NFY7 115 aa10.19□□□□□ -0.78
CRLF3-203ENST00000578692 LCE2BO14633 110 aa10.19□□□□□ -0.78
CRLF3-203ENST00000578692 AMMECR1LQ6DCA0 310 aa10.19□□□□□ -0.78
CRLF3-203ENST00000578692 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.18□□□□□ -0.78
CRLF3-203ENST00000578692 H7C423 109 aa10.18□□□□□ -0.78
CRLF3-203ENST00000578692 PANO1I0J062 215 aa10.18□□□□□ -0.78
CRLF3-203ENST00000578692 APCSP02743 223 aa10.18□□□□□ -0.78
CRLF3-203ENST00000578692 SLPIP03973 132 aa10.18□□□□□ -0.78
CRLF3-203ENST00000578692 RPL37AP61513 92 aaKnown RBP10.18□□□□□ -0.78
CRLF3-203ENST00000578692 RNASEKQ6P5S7 137 aaKnown RBP10.18□□□□□ -0.78
CRLF3-203ENST00000578692 BORCS7Q96B45 105 aa10.18□□□□□ -0.78
CRLF3-203ENST00000578692 SMIM7Q9BQ49 75 aa10.18□□□□□ -0.78
CRLF3-203ENST00000578692 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.17□□□□□ -0.78
CRLF3-203ENST00000578692 IGKV2-29A2NJV5 120 aaPredicted RBP10.17□□□□□ -0.78
CRLF3-203ENST00000578692 GAGE12HA6NDE8 117 aa10.17□□□□□ -0.78
CRLF3-203ENST00000578692 NDUFS6O75380 124 aaKnown RBP10.17□□□□□ -0.78
CRLF3-203ENST00000578692 PMCHP20382 165 aa10.17□□□□□ -0.78
CRLF3-203ENST00000578692 CFAP161Q6P656 301 aa10.17□□□□□ -0.78
CRLF3-203ENST00000578692 FAM210AQ96ND0 272 aa10.17□□□□□ -0.78
CRLF3-203ENST00000578692 IGHV3-64A0A075B6Q5 118 aa10.16□□□□□ -0.78
CRLF3-203ENST00000578692 TRBV6-5A0A0K0K1A5 114 aa10.16□□□□□ -0.78
CRLF3-203ENST00000578692 ZNF727A8MUV8 499 aa10.16□□□□□ -0.78
CRLF3-203ENST00000578692 I3L3M4 83 aa10.16□□□□□ -0.78
CRLF3-203ENST00000578692 LINC01551Q86U37 167 aa10.16□□□□□ -0.78
CRLF3-203ENST00000578692 TSKUQ8WUA8 353 aa10.16□□□□□ -0.78
CRLF3-203ENST00000578692 DPH3Q96FX2 82 aa10.16□□□□□ -0.78
CRLF3-203ENST00000578692 A0A1B0GUT8 65 aa10.15□□□□□ -0.78
CRLF3-203ENST00000578692 HIGD1CA8MV81 97 aa10.15□□□□□ -0.78
CRLF3-203ENST00000578692 SRP19P09132 144 aaKnown RBP10.15□□□□□ -0.78
CRLF3-203ENST00000578692 FGF6P10767 208 aa10.15□□□□□ -0.78
CRLF3-203ENST00000578692 CHCHD10Q8WYQ3 142 aaPredicted RBP10.15□□□□□ -0.78
CRLF3-203ENST00000578692 OSTCQ9NRP0 149 aa10.15□□□□□ -0.78
CRLF3-203ENST00000578692 FAM231BA6NCW3 169 aa10.14□□□□□ -0.79
CRLF3-203ENST00000578692 GAS8-AS1O95177 125 aa10.14□□□□□ -0.79
CRLF3-203ENST00000578692 OXTP01178 125 aa10.14□□□□□ -0.79
CRLF3-203ENST00000578692 CIRBPQ14011 172 aaKnown RBP10.14□□□□□ -0.79
CRLF3-203ENST00000578692 C15orf56Q8N910 161 aa10.14□□□□□ -0.79
CRLF3-203ENST00000578692 TMEM191AQ9H0A3 160 aa10.14□□□□□ -0.79
CRLF3-203ENST00000578692 ST20Q9HBF5 79 aa10.14□□□□□ -0.79
CRLF3-203ENST00000578692 ZNF25P17030 456 aaPredicted RBP10.14□□□□□ -0.79
CRLF3-203ENST00000578692 RAB4AP20338 218 aa10.14□□□□□ -0.79
CRLF3-203ENST00000578692 BTF3L4Q96K17 158 aa10.14□□□□□ -0.79
CRLF3-203ENST00000578692 ESDP10768 282 aa10.13□□□□□ -0.79
CRLF3-203ENST00000578692 OR5A1Q8NGJ0 315 aa10.13□□□□□ -0.79
CRLF3-203ENST00000578692 RNF185Q96GF1 192 aa10.13□□□□□ -0.79
CRLF3-203ENST00000578692 TMEM101Q96IK0 257 aa10.13□□□□□ -0.79
CRLF3-203ENST00000578692 TSHBP01222 138 aa10.12□□□□□ -0.79
CRLF3-203ENST00000578692 RPS10P46783 165 aaKnown RBP10.12□□□□□ -0.79
CRLF3-203ENST00000578692 POLR2KP53803 58 aaKnown RBP10.12□□□□□ -0.79
CRLF3-203ENST00000578692 A0A087WYN8 130 aa10.11□□□□□ -0.79
CRLF3-203ENST00000578692 CHTF8P0CG12 524 aa10.11□□□□□ -0.79
CRLF3-203ENST00000578692 HNRNPA3P51991 378 aaKnown RBP10.11□□□□□ -0.79
CRLF3-203ENST00000578692 TMEM241Q24JQ0 296 aa10.11□□□□□ -0.79
CRLF3-203ENST00000578692 HIGD2BQ4VC39 106 aa10.11□□□□□ -0.79
CRLF3-203ENST00000578692 AMN1Q8IY45 258 aa10.11□□□□□ -0.79
CRLF3-203ENST00000578692 MRAP2Q96G30 205 aa10.11□□□□□ -0.79
CRLF3-203ENST00000578692 TMEM242Q9NWH2 141 aa10.11□□□□□ -0.79
CRLF3-203ENST00000578692 V9GYV3 84 aa10.11□□□□□ -0.79
CRLF3-203ENST00000578692 TRBV27A0A0K0K1C4 114 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 249.1 ms