RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 LHFPL5Q8TAF8 219 aa3.2□□□□□ -1.9
PTPRM-208ENST00000578600 MARVELD1Q9BSK0 173 aa3.2□□□□□ -1.9
PTPRM-208ENST00000578600 ARL6Q9H0F7 186 aa3.2□□□□□ -1.9
PTPRM-208ENST00000578600 Q9H521 79 aa3.2□□□□□ -1.9
PTPRM-208ENST00000578600 MRPL16Q9NX20 251 aaKnown RBP3.2□□□□□ -1.9
PTPRM-208ENST00000578600 TIMM9Q9Y5J7 89 aa3.2□□□□□ -1.9
PTPRM-208ENST00000578600 LENEPQ9Y5L5 61 aa3.2□□□□□ -1.9
PTPRM-208ENST00000578600 IGKV1OR2-108A0A075B7D4 117 aa3.19□□□□□ -1.9
PTPRM-208ENST00000578600 CD3DP04234 171 aa3.19□□□□□ -1.9
PTPRM-208ENST00000578600 C10orf113Q5VZT2 155 aa3.19□□□□□ -1.9
PTPRM-208ENST00000578600 SPINK6Q6UWN8 80 aa3.19□□□□□ -1.9
PTPRM-208ENST00000578600 FAM19A1Q7Z5A9 133 aa3.19□□□□□ -1.9
PTPRM-208ENST00000578600 SNX29P2Q8IUI4 249 aa3.19□□□□□ -1.9
PTPRM-208ENST00000578600 ORMDL3Q8N138 153 aa3.19□□□□□ -1.9
PTPRM-208ENST00000578600 ORAOV1Q8WV07 137 aa3.19□□□□□ -1.9
PTPRM-208ENST00000578600 LINC00474Q9P2X8 69 aa3.19□□□□□ -1.9
PTPRM-208ENST00000578600 RBAKDNA6NC62 111 aa3.18□□□□□ -1.9
PTPRM-208ENST00000578600 A8MWL6 223 aa3.18□□□□□ -1.9
PTPRM-208ENST00000578600 CRPP02741 224 aa3.18□□□□□ -1.9
PTPRM-208ENST00000578600 FAUP35544 74 aaKnown RBP3.18□□□□□ -1.9
PTPRM-208ENST00000578600 KRTAP12-2P59991 146 aa3.18□□□□□ -1.9
PTPRM-208ENST00000578600 SPANXN5Q5MJ07 72 aa3.18□□□□□ -1.9
PTPRM-208ENST00000578600 DPPA3Q6W0C5 159 aa3.18□□□□□ -1.9
PTPRM-208ENST00000578600 ZNF664Q8N3J9 261 aa3.18□□□□□ -1.9
PTPRM-208ENST00000578600 C9orf163Q8N9P6 203 aa3.18□□□□□ -1.9
PTPRM-208ENST00000578600 PTH2Q96A98 100 aa3.18□□□□□ -1.9
PTPRM-208ENST00000578600 RTBDNQ9BSG5 229 aaPredicted RBP3.18□□□□□ -1.9
PTPRM-208ENST00000578600 FAM25AB3EWG3 89 aa3.17□□□□□ -1.9
PTPRM-208ENST00000578600 FAM25CB3EWG5 89 aa3.17□□□□□ -1.9
PTPRM-208ENST00000578600 FAM25GB3EWG6 89 aa3.17□□□□□ -1.9
PTPRM-208ENST00000578600 LECT2O14960 151 aa3.17□□□□□ -1.9
PTPRM-208ENST00000578600 AKAIN1P0CW23 69 aa3.17□□□□□ -1.9
PTPRM-208ENST00000578600 IGLC2P0DOY2 106 aa3.17□□□□□ -1.9
PTPRM-208ENST00000578600 GZMBP10144 247 aa3.17□□□□□ -1.9
PTPRM-208ENST00000578600 INPP1P49441 399 aa3.17□□□□□ -1.9
PTPRM-208ENST00000578600 TAS2R30P59541 319 aa3.17□□□□□ -1.9
PTPRM-208ENST00000578600 MIAQ16674 131 aa3.17□□□□□ -1.9
PTPRM-208ENST00000578600 TMEM128Q5BJH2 165 aa3.17□□□□□ -1.9
PTPRM-208ENST00000578600 Q8TAT8 98 aa3.17□□□□□ -1.9
PTPRM-208ENST00000578600 DEDD2Q8WXF8 326 aa3.17□□□□□ -1.9
PTPRM-208ENST00000578600 CYTL1Q9NRR1 136 aa3.17□□□□□ -1.9
PTPRM-208ENST00000578600 LYRM2Q9NU23 88 aaPredicted RBP3.17□□□□□ -1.9
PTPRM-208ENST00000578600 TMEM14CQ9P0S9 112 aa3.17□□□□□ -1.9
PTPRM-208ENST00000578600 ZNF492Q9P255 531 aa3.17□□□□□ -1.9
PTPRM-208ENST00000578600 COMMD3Q9UBI1 195 aa3.17□□□□□ -1.9
PTPRM-208ENST00000578600 LRP2P98164 4655 aa3.16□□□□□ -1.9
PTPRM-208ENST00000578600 TRBV19A0A075B6N1 114 aa3.16□□□□□ -1.9
PTPRM-208ENST00000578600 IGHV3-64A0A075B6Q5 118 aa3.16□□□□□ -1.9
PTPRM-208ENST00000578600 TRAV26-2A0A0B4J265 109 aa3.16□□□□□ -1.9
PTPRM-208ENST00000578600 TRAV21A0A0B4J279 112 aa3.16□□□□□ -1.9
PTPRM-208ENST00000578600 IFNA7P01567 189 aa3.16□□□□□ -1.9
PTPRM-208ENST00000578600 SFTA3P0C7M3 94 aa3.16□□□□□ -1.9
PTPRM-208ENST00000578600 AP3S2P59780 193 aa3.16□□□□□ -1.9
PTPRM-208ENST00000578600 BTN1A1Q13410 526 aa3.16□□□□□ -1.9
PTPRM-208ENST00000578600 LUZP6Q538Z0 58 aa3.16□□□□□ -1.9
PTPRM-208ENST00000578600 TMEM97Q5BJF2 176 aa3.16□□□□□ -1.9
PTPRM-208ENST00000578600 FAM74A1Q5RGS3 127 aa3.16□□□□□ -1.9
PTPRM-208ENST00000578600 Q6AWC8 147 aa3.16□□□□□ -1.9
PTPRM-208ENST00000578600 LYZL2Q7Z4W2 148 aa3.16□□□□□ -1.9
PTPRM-208ENST00000578600 NIT1Q86X76 327 aa3.16□□□□□ -1.9
PTPRM-208ENST00000578600 CNBD2Q96M20 576 aa3.16□□□□□ -1.9
PTPRM-208ENST00000578600 MRPS26Q9BYN8 205 aaKnown RBP3.16□□□□□ -1.9
PTPRM-208ENST00000578600 AGPAT4-IT1Q9H0P7 198 aa3.16□□□□□ -1.9
PTPRM-208ENST00000578600 MIXL1Q9H2W2 232 aa3.16□□□□□ -1.9
PTPRM-208ENST00000578600 PSENENQ9NZ42 101 aa3.16□□□□□ -1.9
PTPRM-208ENST00000578600 PSORS1C2Q9UIG4 136 aa3.16□□□□□ -1.9
PTPRM-208ENST00000578600 PKHD1L1Q86WI1 4243 aa3.15□□□□□ -1.9
PTPRM-208ENST00000578600 A8MWV9 139 aa3.15□□□□□ -1.91
PTPRM-208ENST00000578600 SLC17A3O00476 420 aa3.15□□□□□ -1.91
PTPRM-208ENST00000578600 IAPPP10997 89 aa3.15□□□□□ -1.91
PTPRM-208ENST00000578600 AQP4P55087 323 aa3.15□□□□□ -1.91
PTPRM-208ENST00000578600 CNBPP62633 177 aaKnown RBP3.15□□□□□ -1.91
PTPRM-208ENST00000578600 CIRBPQ14011 172 aaKnown RBP3.15□□□□□ -1.91
PTPRM-208ENST00000578600 FAM231DQ6ZW35 169 aa3.15□□□□□ -1.91
PTPRM-208ENST00000578600 MRPL52Q86TS9 123 aaKnown RBP3.15□□□□□ -1.91
PTPRM-208ENST00000578600 CLVS1Q8IUQ0 354 aaPredicted RBP3.15□□□□□ -1.91
PTPRM-208ENST00000578600 UBE2WQ96B02 151 aa3.15□□□□□ -1.91
PTPRM-208ENST00000578600 SLC25A21Q9BQT8 299 aaPredicted RBP3.15□□□□□ -1.91
PTPRM-208ENST00000578600 KCNIP2Q9NS61 270 aa3.15□□□□□ -1.91
PTPRM-208ENST00000578600 C9JQL5 133 aa3.14□□□□□ -1.91
PTPRM-208ENST00000578600 TMEM262E9PQX1 116 aa3.14□□□□□ -1.91
PTPRM-208ENST00000578600 H3BQ15 152 aa3.14□□□□□ -1.91
PTPRM-208ENST00000578600 KRTAP10-8P60410 259 aa3.14□□□□□ -1.91
PTPRM-208ENST00000578600 WFDC2Q14508 124 aa3.14□□□□□ -1.91
PTPRM-208ENST00000578600 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
PTPRM-208ENST00000578600 PATE2Q6UY27 113 aa3.14□□□□□ -1.91
PTPRM-208ENST00000578600 SDIM1Q6ZPB5 146 aa3.14□□□□□ -1.91
PTPRM-208ENST00000578600 DAZ4Q86SG3 579 aaKnown RBP3.14□□□□□ -1.91
PTPRM-208ENST00000578600 ZFAND2AQ8N6M9 145 aa3.14□□□□□ -1.91
PTPRM-208ENST00000578600 PARD6GQ9BYG4 376 aaPredicted RBP3.14□□□□□ -1.91
PTPRM-208ENST00000578600 RSL24D1Q9UHA3 163 aaKnown RBP3.14□□□□□ -1.91
PTPRM-208ENST00000578600 LRP1Q07954 4544 aaKnown RBP3.14□□□□□ -1.91
PTPRM-208ENST00000578600 TRBV10-1A0A0K0K1A3 114 aa3.13□□□□□ -1.91
PTPRM-208ENST00000578600 LOC389332A0A1B0GUA5 103 aa3.13□□□□□ -1.91
PTPRM-208ENST00000578600 NBEAP1P0C6P0 100 aa3.13□□□□□ -1.91
PTPRM-208ENST00000578600 PVALBP20472 110 aaPredicted RBP3.13□□□□□ -1.91
PTPRM-208ENST00000578600 S100A11P31949 105 aa3.13□□□□□ -1.91
PTPRM-208ENST00000578600 S100A10P60903 97 aa3.13□□□□□ -1.91
PTPRM-208ENST00000578600 VBP1P61758 197 aa3.13□□□□□ -1.91
PTPRM-208ENST00000578600 HBG1P69891 147 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms