RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 CSMD1Q96PZ7 3565 aa7.98□□□□□ -1.13
SKA2-204ENST00000578519 A6NDN8 102 aa7.98□□□□□ -1.13
SKA2-204ENST00000578519 C11orf86A6NJI1 115 aa7.98□□□□□ -1.13
SKA2-204ENST00000578519 E9PLD3 99 aa7.98□□□□□ -1.13
SKA2-204ENST00000578519 H7C423 109 aa7.98□□□□□ -1.13
SKA2-204ENST00000578519 P0DMU3 169 aa7.98□□□□□ -1.13
SKA2-204ENST00000578519 FAM231AP0DMU4 169 aa7.98□□□□□ -1.13
SKA2-204ENST00000578519 FAM231CP0DMU5 169 aa7.98□□□□□ -1.13
SKA2-204ENST00000578519 GTSF1LQ9H1H1 148 aa7.98□□□□□ -1.13
SKA2-204ENST00000578519 SVEP1Q4LDE5 3571 aa7.98□□□□□ -1.13
SKA2-204ENST00000578519 CSMD2Q7Z408 3487 aa7.97□□□□□ -1.13
SKA2-204ENST00000578519 ACANP16112 2415 aa7.97□□□□□ -1.13
SKA2-204ENST00000578519 ZANQ9Y493 2812 aa7.97□□□□□ -1.13
SKA2-204ENST00000578519 TEX48A0A1B0GUV7 120 aa7.97□□□□□ -1.13
SKA2-204ENST00000578519 FGF6P10767 208 aa7.97□□□□□ -1.13
SKA2-204ENST00000578519 TAL2Q16559 108 aa7.97□□□□□ -1.13
SKA2-204ENST00000578519 Q6ZSN1 163 aa7.97□□□□□ -1.13
SKA2-204ENST00000578519 NFE4Q86UQ8 179 aa7.97□□□□□ -1.13
SKA2-204ENST00000578519 MYO9AB2RTY4 2548 aa7.97□□□□□ -1.13
SKA2-204ENST00000578519 SORL1Q92673 2214 aa7.97□□□□□ -1.13
SKA2-204ENST00000578519 IGLV4-3A0A075B6K6 122 aa7.96□□□□□ -1.14
SKA2-204ENST00000578519 PLAC8L1A1L4L8 177 aa7.96□□□□□ -1.14
SKA2-204ENST00000578519 UBE2L6O14933 153 aa7.96□□□□□ -1.14
SKA2-204ENST00000578519 MIFP14174 115 aa7.96□□□□□ -1.14
SKA2-204ENST00000578519 MRPS36P82909 103 aaKnown RBP7.96□□□□□ -1.14
SKA2-204ENST00000578519 MPV17L2Q567V2 206 aa7.96□□□□□ -1.14
SKA2-204ENST00000578519 TMEM170BQ5T4T1 132 aa7.96□□□□□ -1.14
SKA2-204ENST00000578519 SLC25A29Q8N8R3 303 aa7.96□□□□□ -1.14
SKA2-204ENST00000578519 PHLDA1Q8WV24 401 aaPredicted RBP7.96□□□□□ -1.14
SKA2-204ENST00000578519 TMEM101Q96IK0 257 aa7.96□□□□□ -1.14
SKA2-204ENST00000578519 TRAV8-6A0A0B4J262 113 aa7.95□□□□□ -1.14
SKA2-204ENST00000578519 MYMXA0A1B0GTQ4 84 aa7.95□□□□□ -1.14
SKA2-204ENST00000578519 GAGE12JA6NER3 117 aa7.95□□□□□ -1.14
SKA2-204ENST00000578519 UBE2D3P61077 147 aa7.95□□□□□ -1.14
SKA2-204ENST00000578519 UBE2D2P62837 147 aa7.95□□□□□ -1.14
SKA2-204ENST00000578519 GAGE1Q13065 139 aa7.95□□□□□ -1.14
SKA2-204ENST00000578519 GAGE4Q13068 117 aa7.95□□□□□ -1.14
SKA2-204ENST00000578519 GAGE5Q13069 117 aa7.95□□□□□ -1.14
SKA2-204ENST00000578519 GAGE13Q4V321 117 aa7.95□□□□□ -1.14
SKA2-204ENST00000578519 BVES-AS1Q5T3Y7 98 aa7.95□□□□□ -1.14
SKA2-204ENST00000578519 ORAOV1Q8WV07 137 aa7.95□□□□□ -1.14
SKA2-204ENST00000578519 PLEKHB2Q96CS7 222 aa7.95□□□□□ -1.14
SKA2-204ENST00000578519 AMELXQ99217 191 aa7.95□□□□□ -1.14
SKA2-204ENST00000578519 CHCHD7Q9BUK0 85 aa7.95□□□□□ -1.14
SKA2-204ENST00000578519 CSDC2Q9Y534 153 aaKnown RBP7.95□□□□□ -1.14
SKA2-204ENST00000578519 TRBV25-1A0A075B6N4 114 aa7.94□□□□□ -1.14
SKA2-204ENST00000578519 A0A1B0GV90 55 aa7.94□□□□□ -1.14
SKA2-204ENST00000578519 EMP1P54849 157 aa7.94□□□□□ -1.14
SKA2-204ENST00000578519 KRTAP24-1Q3LI83 254 aa7.94□□□□□ -1.14
SKA2-204ENST00000578519 LCE3BQ5TA77 95 aa7.94□□□□□ -1.14
SKA2-204ENST00000578519 AMMECR1LQ6DCA0 310 aa7.94□□□□□ -1.14
SKA2-204ENST00000578519 C2orf91Q6ZV80 131 aa7.94□□□□□ -1.14
SKA2-204ENST00000578519 PCP2Q8IVA1 136 aa7.94□□□□□ -1.14
SKA2-204ENST00000578519 LINC00612Q8N6U2 182 aa7.94□□□□□ -1.14
SKA2-204ENST00000578519 TMEM243Q9BU79 118 aa7.94□□□□□ -1.14
SKA2-204ENST00000578519 CHAC1Q9BUX1 264 aa7.94□□□□□ -1.14
SKA2-204ENST00000578519 UBE2D4Q9Y2X8 147 aa7.94□□□□□ -1.14
SKA2-204ENST00000578519 MXRA5Q9NR99 2828 aa7.94□□□□□ -1.14
SKA2-204ENST00000578519 CELSR1Q9NYQ6 3014 aa7.94□□□□□ -1.14
SKA2-204ENST00000578519 IGLV4-69A0A075B6H9 119 aa7.93□□□□□ -1.14
SKA2-204ENST00000578519 IGHV3-38A0A0C4DH36 116 aa7.93□□□□□ -1.14
SKA2-204ENST00000578519 TINCRA0A1B0GVN0 87 aa7.93□□□□□ -1.14
SKA2-204ENST00000578519 H3BRM9 83 aa7.93□□□□□ -1.14
SKA2-204ENST00000578519 DEFB130BP0DP73 79 aa7.93□□□□□ -1.14
SKA2-204ENST00000578519 DEFB130AP0DP74 79 aa7.93□□□□□ -1.14
SKA2-204ENST00000578519 LGALS3P17931 250 aaKnown RBP7.93□□□□□ -1.14
SKA2-204ENST00000578519 FHL2Q14192 279 aa7.93□□□□□ -1.14
SKA2-204ENST00000578519 GEMIN7Q9H840 131 aaKnown RBP7.93□□□□□ -1.14
SKA2-204ENST00000578519 X6R8D5 127 aa7.93□□□□□ -1.14
SKA2-204ENST00000578519 MAP1AP78559 2803 aaPredicted RBP7.93□□□□□ -1.14
SKA2-204ENST00000578519 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.92□□□□□ -1.14
SKA2-204ENST00000578519 NBPF19A0A087WUL8 3843 aa7.92□□□□□ -1.14
SKA2-204ENST00000578519 IGKV2D-26A0A0A0MRZ7 120 aa7.92□□□□□ -1.14
SKA2-204ENST00000578519 IGKV2-29A2NJV5 120 aaPredicted RBP7.92□□□□□ -1.14
SKA2-204ENST00000578519 LEPROTO15243 131 aa7.92□□□□□ -1.14
SKA2-204ENST00000578519 ZNF25P17030 456 aaPredicted RBP7.92□□□□□ -1.14
SKA2-204ENST00000578519 TCTAP57738 103 aa7.92□□□□□ -1.14
SKA2-204ENST00000578519 SCGB1D4Q6XE38 83 aa7.92□□□□□ -1.14
SKA2-204ENST00000578519 OR5A1Q8NGJ0 315 aa7.92□□□□□ -1.14
SKA2-204ENST00000578519 DEFB104AQ8WTQ1 72 aa7.92□□□□□ -1.14
SKA2-204ENST00000578519 RNF183Q96D59 192 aa7.92□□□□□ -1.14
SKA2-204ENST00000578519 PRO0255Q9UI72 69 aa7.92□□□□□ -1.14
SKA2-204ENST00000578519 ITPR2Q14571 2701 aa7.92□□□□□ -1.14
SKA2-204ENST00000578519 ZFHX3Q15911 3703 aa7.91□□□□□ -1.14
SKA2-204ENST00000578519 ZNF815PA8K554 130 aa7.91□□□□□ -1.14
SKA2-204ENST00000578519 A8MZ25 164 aa7.91□□□□□ -1.14
SKA2-204ENST00000578519 SPART-AS1P0CW21 52 aa7.91□□□□□ -1.14
SKA2-204ENST00000578519 IGHV4-30-4P0DP06 118 aa7.91□□□□□ -1.14
SKA2-204ENST00000578519 PTTG1IPP53801 180 aa7.91□□□□□ -1.14
SKA2-204ENST00000578519 TIRAPP58753 221 aa7.91□□□□□ -1.14
SKA2-204ENST00000578519 DAD1P61803 113 aa7.91□□□□□ -1.14
SKA2-204ENST00000578519 SH2D6Q7Z4S9 175 aa7.91□□□□□ -1.14
SKA2-204ENST00000578519 TMEM238LA0A1B0GVL6 79 aa7.9□□□□□ -1.14
SKA2-204ENST00000578519 TMEM223A0PJW6 202 aa7.9□□□□□ -1.14
SKA2-204ENST00000578519 A6NJY4 79 aa7.9□□□□□ -1.14
SKA2-204ENST00000578519 HERVK_113P63121 156 aa7.9□□□□□ -1.14
SKA2-204ENST00000578519 DEFB135Q30KP9 77 aa7.9□□□□□ -1.14
SKA2-204ENST00000578519 C4orf48Q5BLP8 95 aa7.9□□□□□ -1.14
SKA2-204ENST00000578519 FAM222AQ5U5X8 452 aa7.9□□□□□ -1.14
SKA2-204ENST00000578519 HIST1H4GQ99525 98 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms