RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 XGP55808 180 aa7.79□□□□□ -1.16
PTPRM-205ENST00000577827 Q6Q795 121 aa7.79□□□□□ -1.16
PTPRM-205ENST00000577827 MIR7-3HGQ8N6C7 128 aa7.79□□□□□ -1.16
PTPRM-205ENST00000577827 TANC2Q9HCD6 1990 aa7.78□□□□□ -1.16
PTPRM-205ENST00000577827 IGHV4-30-2A0A087WSY4 118 aa7.78□□□□□ -1.16
PTPRM-205ENST00000577827 RNASE3P12724 160 aaKnown RBP7.78□□□□□ -1.16
PTPRM-205ENST00000577827 TMEM258P61165 79 aa7.78□□□□□ -1.16
PTPRM-205ENST00000577827 GAS8-AS1O95177 125 aa7.78□□□□□ -1.16
PTPRM-205ENST00000577827 NDUFA1O15239 70 aa7.78□□□□□ -1.16
PTPRM-205ENST00000577827 PSMG3-AS1Q96PY0 264 aa7.78□□□□□ -1.16
PTPRM-205ENST00000577827 F5H768 121 aa7.77□□□□□ -1.16
PTPRM-205ENST00000577827 DEFB136Q30KP8 78 aa7.77□□□□□ -1.16
PTPRM-205ENST00000577827 TMEM61Q8N0U2 210 aa7.77□□□□□ -1.16
PTPRM-205ENST00000577827 DPH3Q96FX2 82 aa7.77□□□□□ -1.17
PTPRM-205ENST00000577827 TMEM256-PLSCR3K7ERE1 68 aa7.77□□□□□ -1.17
PTPRM-205ENST00000577827 CCL24O00175 119 aa7.77□□□□□ -1.17
PTPRM-205ENST00000577827 CEMP1Q6PRD7 247 aaPredicted RBP7.77□□□□□ -1.17
PTPRM-205ENST00000577827 MAPK1IP1LQ8NDC0 245 aa7.77□□□□□ -1.17
PTPRM-205ENST00000577827 CDKN2A-AS1Q9UH64 79 aa7.77□□□□□ -1.17
PTPRM-205ENST00000577827 PTPRQQ9UMZ3 2332 aa7.77□□□□□ -1.17
PTPRM-205ENST00000577827 KLLNB2CW77 178 aa7.77□□□□□ -1.17
PTPRM-205ENST00000577827 PDE6GP18545 87 aa7.77□□□□□ -1.17
PTPRM-205ENST00000577827 INSL3P51460 131 aa7.77□□□□□ -1.17
PTPRM-205ENST00000577827 ACACBO00763 2458 aa7.76□□□□□ -1.17
PTPRM-205ENST00000577827 PSMB8P28062 276 aa7.76□□□□□ -1.17
PTPRM-205ENST00000577827 APOC4P55056 127 aa7.76□□□□□ -1.17
PTPRM-205ENST00000577827 RBM3P98179 157 aaKnown RBP7.76□□□□□ -1.17
PTPRM-205ENST00000577827 LINC00308Q8TCZ7 52 aa7.76□□□□□ -1.17
PTPRM-205ENST00000577827 LST1O00453 97 aa7.76□□□□□ -1.17
PTPRM-205ENST00000577827 NKAPP1Q8N9T2 125 aa7.76□□□□□ -1.17
PTPRM-205ENST00000577827 UBE2D3P61077 147 aa7.75□□□□□ -1.17
PTPRM-205ENST00000577827 UBE2D2P62837 147 aa7.75□□□□□ -1.17
PTPRM-205ENST00000577827 FAM240AA0A1B0GVK7 77 aa7.75□□□□□ -1.17
PTPRM-205ENST00000577827 IGIPA6NJ69 53 aa7.75□□□□□ -1.17
PTPRM-205ENST00000577827 TMEM263Q8WUH6 116 aaKnown RBP7.75□□□□□ -1.17
PTPRM-205ENST00000577827 PRR9Q5T870 116 aa7.75□□□□□ -1.17
PTPRM-205ENST00000577827 ATP5EP2Q5VTU8 51 aa7.75□□□□□ -1.17
PTPRM-205ENST00000577827 C3orf22Q8N5N4 141 aa7.75□□□□□ -1.17
PTPRM-205ENST00000577827 OTOGLQ3ZCN5 2332 aa7.75□□□□□ -1.17
PTPRM-205ENST00000577827 CLPSL1A2RUU4 121 aa7.74□□□□□ -1.17
PTPRM-205ENST00000577827 TSHBP01222 138 aa7.74□□□□□ -1.17
PTPRM-205ENST00000577827 FAM222AQ5U5X8 452 aa7.74□□□□□ -1.17
PTPRM-205ENST00000577827 Q96MF0 132 aa7.74□□□□□ -1.17
PTPRM-205ENST00000577827 LINC00467Q9BRT7 94 aa7.74□□□□□ -1.17
PTPRM-205ENST00000577827 FAM208BQ5VWN6 2430 aa7.74□□□□□ -1.17
PTPRM-205ENST00000577827 H7C423 109 aa7.74□□□□□ -1.17
PTPRM-205ENST00000577827 C11orf71Q6IPW1 123 aa7.74□□□□□ -1.17
PTPRM-205ENST00000577827 WNK1Q9H4A3 2382 aa7.74□□□□□ -1.17
PTPRM-205ENST00000577827 Q6ZS46 218 aa7.74□□□□□ -1.17
PTPRM-205ENST00000577827 C9orf85Q96MD7 179 aa7.74□□□□□ -1.17
PTPRM-205ENST00000577827 CLPSL2Q6UWE3 100 aa7.73□□□□□ -1.17
PTPRM-205ENST00000577827 DSCAMO60469 2012 aa7.73□□□□□ -1.17
PTPRM-205ENST00000577827 IGLV2-18A0A075B6J9 118 aa7.73□□□□□ -1.17
PTPRM-205ENST00000577827 GYPEP15421 78 aa7.73□□□□□ -1.17
PTPRM-205ENST00000577827 C4orf3Q8WVX3 66 aa7.73□□□□□ -1.17
PTPRM-205ENST00000577827 Q9HAA7 133 aa7.73□□□□□ -1.17
PTPRM-205ENST00000577827 BDP1A6H8Y1 2624 aa7.73□□□□□ -1.17
PTPRM-205ENST00000577827 C3orf56Q8N813 242 aa7.72□□□□□ -1.17
PTPRM-205ENST00000577827 MAP6D1Q9H9H5 199 aa7.72□□□□□ -1.17
PTPRM-205ENST00000577827 CSPG4Q6UVK1 2322 aa7.72□□□□□ -1.17
PTPRM-205ENST00000577827 PIK3CD-AS1Q5SR53 167 aa7.72□□□□□ -1.17
PTPRM-205ENST00000577827 C14orf132Q9NPU4 83 aa7.72□□□□□ -1.17
PTPRM-205ENST00000577827 CRYGDP07320 174 aa7.72□□□□□ -1.17
PTPRM-205ENST00000577827 MRPS36P82909 103 aaKnown RBP7.72□□□□□ -1.17
PTPRM-205ENST00000577827 IBA57-AS1B1ANH7 110 aa7.71□□□□□ -1.17
PTPRM-205ENST00000577827 M0QXV9 152 aa7.71□□□□□ -1.18
PTPRM-205ENST00000577827 PRO3102Q9H379 93 aa7.71□□□□□ -1.18
PTPRM-205ENST00000577827 LINC01546A6NGU7 62 aa7.71□□□□□ -1.18
PTPRM-205ENST00000577827 A0A096LPF7 62 aa7.7□□□□□ -1.18
PTPRM-205ENST00000577827 F8W735 103 aaPredicted RBP7.7□□□□□ -1.18
PTPRM-205ENST00000577827 C2CD3Q4AC94 2353 aa7.7□□□□□ -1.18
PTPRM-205ENST00000577827 IGLV4-69A0A075B6H9 119 aa7.69□□□□□ -1.18
PTPRM-205ENST00000577827 FUSP35637 526 aaKnown RBP eCLIP7.69□□□□□ -1.18
PTPRM-205ENST00000577827 Q6ZQT7 251 aa7.69□□□□□ -1.18
PTPRM-205ENST00000577827 WDR87Q6ZQQ6 2873 aa7.69□□□□□ -1.18
PTPRM-205ENST00000577827 NDUFA7O95182 113 aa7.69□□□□□ -1.18
PTPRM-205ENST00000577827 MRGPRG-AS1Q2M3A8 158 aa7.68□□□□□ -1.18
PTPRM-205ENST00000577827 UBE2D4Q9Y2X8 147 aa7.68□□□□□ -1.18
PTPRM-205ENST00000577827 MUC6Q6W4X9 2439 aa7.68□□□□□ -1.18
PTPRM-205ENST00000577827 CCDC179H3BU77 68 aa7.67□□□□□ -1.18
PTPRM-205ENST00000577827 CRIP2P52943 208 aaPredicted RBP7.67□□□□□ -1.18
PTPRM-205ENST00000577827 DIRC1Q969H9 104 aa7.67□□□□□ -1.18
PTPRM-205ENST00000577827 SDIM1Q6ZPB5 146 aa7.67□□□□□ -1.18
PTPRM-205ENST00000577827 DCANP1Q8TF63 244 aa7.67□□□□□ -1.18
PTPRM-205ENST00000577827 RMI2Q96E14 147 aa7.67□□□□□ -1.18
PTPRM-205ENST00000577827 COX7CP15954 63 aa7.66□□□□□ -1.18
PTPRM-205ENST00000577827 NREPQ16612 68 aa7.66□□□□□ -1.18
PTPRM-205ENST00000577827 SERP2Q8N6R1 65 aa7.66□□□□□ -1.18
PTPRM-205ENST00000577827 PRO0255Q9UI72 69 aa7.66□□□□□ -1.18
PTPRM-205ENST00000577827 TET2Q6N021 2002 aaPredicted RBP7.66□□□□□ -1.18
PTPRM-205ENST00000577827 COL4A2P08572 1712 aa7.66□□□□□ -1.18
PTPRM-205ENST00000577827 IGLV1-40P01703 118 aa7.66□□□□□ -1.18
PTPRM-205ENST00000577827 DEFB113Q30KQ7 82 aa7.66□□□□□ -1.18
PTPRM-205ENST00000577827 Q6ZTI0 123 aa7.66□□□□□ -1.18
PTPRM-205ENST00000577827 BRI3O95415 125 aa7.66□□□□□ -1.18
PTPRM-205ENST00000577827 SPAG11BQ08648 103 aa7.66□□□□□ -1.18
PTPRM-205ENST00000577827 CAMK2N2Q96S95 79 aa7.66□□□□□ -1.18
PTPRM-205ENST00000577827 RPL18AQ02543 176 aaKnown RBP7.66□□□□□ -1.18
PTPRM-205ENST00000577827 ARHGAP32A7KAX9 2087 aa7.65□□□□□ -1.18
PTPRM-205ENST00000577827 DEFB114Q30KQ6 69 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms