RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 TSHBP01222 138 aa3.94□□□□□ -1.78
VAPA-203ENST00000577539 SCGB1C2P0DMR2 95 aa3.94□□□□□ -1.78
VAPA-203ENST00000577539 P0DMU3 169 aa3.94□□□□□ -1.78
VAPA-203ENST00000577539 FAM231AP0DMU4 169 aa3.94□□□□□ -1.78
VAPA-203ENST00000577539 FAM231CP0DMU5 169 aa3.94□□□□□ -1.78
VAPA-203ENST00000577539 RNASE13Q5GAN3 156 aaKnown RBP3.94□□□□□ -1.78
VAPA-203ENST00000577539 FOXI2Q6ZQN5 318 aa3.94□□□□□ -1.78
VAPA-203ENST00000577539 TRPT1Q86TN4 253 aaKnown RBP3.94□□□□□ -1.78
VAPA-203ENST00000577539 PHLDA1Q8WV24 401 aaPredicted RBP3.94□□□□□ -1.78
VAPA-203ENST00000577539 RNF183Q96D59 192 aa3.94□□□□□ -1.78
VAPA-203ENST00000577539 JMJD1CQ15652 2540 aa3.94□□□□□ -1.78
VAPA-203ENST00000577539 M0QY20 66 aa3.93□□□□□ -1.78
VAPA-203ENST00000577539 CCL24O00175 119 aa3.93□□□□□ -1.78
VAPA-203ENST00000577539 CRYGDP07320 174 aa3.93□□□□□ -1.78
VAPA-203ENST00000577539 PSMB2P49721 201 aa3.93□□□□□ -1.78
VAPA-203ENST00000577539 KRTAP10-9P60411 292 aa3.93□□□□□ -1.78
VAPA-203ENST00000577539 TMEM141Q96I45 108 aa3.93□□□□□ -1.78
VAPA-203ENST00000577539 LINC01587Q99440 93 aa3.93□□□□□ -1.78
VAPA-203ENST00000577539 IGIPA6NJ69 53 aa3.93□□□□□ -1.78
VAPA-203ENST00000577539 J3QLI3 93 aa3.93□□□□□ -1.78
VAPA-203ENST00000577539 NXPH4O95158 308 aa3.93□□□□□ -1.78
VAPA-203ENST00000577539 PROK1P58294 105 aa3.93□□□□□ -1.78
VAPA-203ENST00000577539 ZNF418Q8TF45 676 aaPredicted RBP3.93□□□□□ -1.78
VAPA-203ENST00000577539 UBE2E2Q96LR5 201 aa3.93□□□□□ -1.78
VAPA-203ENST00000577539 TRAV2A0A0B4J234 112 aa3.93□□□□□ -1.78
VAPA-203ENST00000577539 A0A0J9YXV3 536 aa3.93□□□□□ -1.78
VAPA-203ENST00000577539 J3QQQ9 107 aa3.93□□□□□ -1.78
VAPA-203ENST00000577539 J3QR89 54 aa3.93□□□□□ -1.78
VAPA-203ENST00000577539 LGALS9O00182 355 aa3.93□□□□□ -1.78
VAPA-203ENST00000577539 TMEM61Q8N0U2 210 aa3.93□□□□□ -1.78
VAPA-203ENST00000577539 C9orf85Q96MD7 179 aa3.93□□□□□ -1.78
VAPA-203ENST00000577539 ZNF702PQ9H963 129 aa3.93□□□□□ -1.78
VAPA-203ENST00000577539 IGLV4-69A0A075B6H9 119 aa3.92□□□□□ -1.78
VAPA-203ENST00000577539 TRBV27A0A0K0K1C4 114 aa3.92□□□□□ -1.78
VAPA-203ENST00000577539 G3V4G9 280 aa3.92□□□□□ -1.78
VAPA-203ENST00000577539 I3L3M4 83 aa3.92□□□□□ -1.78
VAPA-203ENST00000577539 PRSS2P07478 247 aa3.92□□□□□ -1.78
VAPA-203ENST00000577539 CD28P10747 220 aa3.92□□□□□ -1.78
VAPA-203ENST00000577539 CEMP1Q6PRD7 247 aaPredicted RBP3.92□□□□□ -1.78
VAPA-203ENST00000577539 ZNRF2Q8NHG8 242 aa3.92□□□□□ -1.78
VAPA-203ENST00000577539 TIMM17AQ99595 171 aa3.92□□□□□ -1.78
VAPA-203ENST00000577539 IGHV3-38A0A0C4DH36 116 aa3.92□□□□□ -1.78
VAPA-203ENST00000577539 Q1RN00 199 aa3.92□□□□□ -1.78
VAPA-203ENST00000577539 IGHV4-31P0DP07 118 aa3.92□□□□□ -1.78
VAPA-203ENST00000577539 TSPEAR-AS2P59090 65 aa3.92□□□□□ -1.78
VAPA-203ENST00000577539 MORN3Q6PF18 240 aaPredicted RBP3.92□□□□□ -1.78
VAPA-203ENST00000577539 Q6YL49 198 aa3.92□□□□□ -1.78
VAPA-203ENST00000577539 XCL2Q9UBD3 114 aa3.92□□□□□ -1.78
VAPA-203ENST00000577539 A0A0J9YY99 117 aa3.91□□□□□ -1.78
VAPA-203ENST00000577539 TRBV6-5A0A0K0K1A5 114 aa3.91□□□□□ -1.78
VAPA-203ENST00000577539 LINC01619G3V211 115 aa3.91□□□□□ -1.78
VAPA-203ENST00000577539 TSPAN13O95857 204 aa3.91□□□□□ -1.78
VAPA-203ENST00000577539 OXTP01178 125 aa3.91□□□□□ -1.78
VAPA-203ENST00000577539 C20orf203Q8NBC4 194 aa3.91□□□□□ -1.78
VAPA-203ENST00000577539 ODF3Q96PU9 254 aa3.91□□□□□ -1.78
VAPA-203ENST00000577539 GTSF1LQ9H1H1 148 aa3.91□□□□□ -1.78
VAPA-203ENST00000577539 F8W1H4 67 aa3.91□□□□□ -1.78
VAPA-203ENST00000577539 M0QXV9 152 aa3.91□□□□□ -1.78
VAPA-203ENST00000577539 RBMY1A1P0DJD3 496 aaKnown RBP3.91□□□□□ -1.78
VAPA-203ENST00000577539 RBMY1CP0DJD4 496 aa3.91□□□□□ -1.78
VAPA-203ENST00000577539 RPL32P62910 135 aaKnown RBP3.91□□□□□ -1.78
VAPA-203ENST00000577539 RBMY1FQ15415 496 aaKnown RBP3.91□□□□□ -1.78
VAPA-203ENST00000577539 RHOHQ15669 191 aa3.91□□□□□ -1.78
VAPA-203ENST00000577539 ZNF580Q9UK33 172 aa3.91□□□□□ -1.78
VAPA-203ENST00000577539 TSSC4Q9Y5U2 329 aaPredicted RBP3.91□□□□□ -1.78
VAPA-203ENST00000577539 CELSR2Q9HCU4 2923 aa3.91□□□□□ -1.78
VAPA-203ENST00000577539 H3BMM0 161 aa3.91□□□□□ -1.78
VAPA-203ENST00000577539 DLX4Q92988 240 aaPredicted RBP3.91□□□□□ -1.78
VAPA-203ENST00000577539 USP24Q9UPU5 2620 aa3.91□□□□□ -1.78
VAPA-203ENST00000577539 ZNF415Q09FC8 603 aa3.9□□□□□ -1.78
VAPA-203ENST00000577539 SMAGPQ0VAQ4 97 aa3.9□□□□□ -1.78
VAPA-203ENST00000577539 POM121L12Q8N7R1 296 aa3.9□□□□□ -1.78
VAPA-203ENST00000577539 Q9UF83 564 aa3.9□□□□□ -1.78
VAPA-203ENST00000577539 TEX15Q9BXT5 2789 aa3.9□□□□□ -1.78
VAPA-203ENST00000577539 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.9□□□□□ -1.78
VAPA-203ENST00000577539 IGKV2-29A2NJV5 120 aaPredicted RBP3.9□□□□□ -1.78
VAPA-203ENST00000577539 IGHV3-53P01767 116 aa3.9□□□□□ -1.78
VAPA-203ENST00000577539 KRTAP10-2P60368 255 aa3.9□□□□□ -1.78
VAPA-203ENST00000577539 NPC2P61916 151 aa3.9□□□□□ -1.78
VAPA-203ENST00000577539 GAGE2BQ13066 116 aa3.9□□□□□ -1.78
VAPA-203ENST00000577539 GAGE2EQ4V326 116 aa3.9□□□□□ -1.78
VAPA-203ENST00000577539 GAGE2AQ6NT46 116 aa3.9□□□□□ -1.78
VAPA-203ENST00000577539 GAGE2DQ9UEU5 116 aa3.9□□□□□ -1.78
VAPA-203ENST00000577539 FN1P02751 2386 aaKnown RBP3.9□□□□□ -1.79
VAPA-203ENST00000577539 IGLV4-3A0A075B6K6 122 aa3.9□□□□□ -1.79
VAPA-203ENST00000577539 TRAV8-3A0A0A6YYJ7 113 aa3.9□□□□□ -1.79
VAPA-203ENST00000577539 M0R2P5 195 aa3.9□□□□□ -1.79
VAPA-203ENST00000577539 DEFB113Q30KQ7 82 aa3.9□□□□□ -1.79
VAPA-203ENST00000577539 LYRM7Q5U5X0 104 aa3.9□□□□□ -1.79
VAPA-203ENST00000577539 SPANXB1Q9NS25 103 aaPredicted RBP3.9□□□□□ -1.79
VAPA-203ENST00000577539 RBMY1BA6NDE4 496 aaKnown RBP3.89□□□□□ -1.79
VAPA-203ENST00000577539 RBMY1EA6NEQ0 496 aaKnown RBP3.89□□□□□ -1.79
VAPA-203ENST00000577539 A8MWV9 139 aa3.89□□□□□ -1.79
VAPA-203ENST00000577539 RBMY1DP0C7P1 496 aaKnown RBP3.89□□□□□ -1.79
VAPA-203ENST00000577539 ZNF22P17026 224 aaPredicted RBP3.89□□□□□ -1.79
VAPA-203ENST00000577539 NSUN5P1Q3KNT7 163 aa3.89□□□□□ -1.79
VAPA-203ENST00000577539 NDUFA11Q86Y39 141 aa3.89□□□□□ -1.79
VAPA-203ENST00000577539 PTH2Q96A98 100 aa3.89□□□□□ -1.79
VAPA-203ENST00000577539 TIMM21Q9BVV7 248 aa3.89□□□□□ -1.79
VAPA-203ENST00000577539 A0A096LNT2 108 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms