RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 CT83Q5H943 113 aa10.17□□□□□ -0.78
SF3B3-215ENST00000577085 A0A1B0GVG6 124 aa10.16□□□□□ -0.78
SF3B3-215ENST00000577085 GATD1Q8NB37 220 aa10.16□□□□□ -0.78
SF3B3-215ENST00000577085 IGLV10-54A0A075B6I4 117 aa10.15□□□□□ -0.78
SF3B3-215ENST00000577085 TRAV8-4A0A0B4J246 113 aa10.15□□□□□ -0.78
SF3B3-215ENST00000577085 A0A1B0GUV1 79 aa10.15□□□□□ -0.78
SF3B3-215ENST00000577085 NDUFS6O75380 124 aaKnown RBP10.15□□□□□ -0.78
SF3B3-215ENST00000577085 LINC01551Q86U37 167 aa10.15□□□□□ -0.78
SF3B3-215ENST00000577085 FOXA3P55318 350 aaPredicted RBP10.14□□□□□ -0.79
SF3B3-215ENST00000577085 AMMECR1LQ6DCA0 310 aa10.14□□□□□ -0.79
SF3B3-215ENST00000577085 Q6ZSA8 131 aa10.14□□□□□ -0.79
SF3B3-215ENST00000577085 TSKUQ8WUA8 353 aa10.14□□□□□ -0.79
SF3B3-215ENST00000577085 RPL39LQ96EH5 51 aaKnown RBP10.14□□□□□ -0.79
SF3B3-215ENST00000577085 A0A1B0GUT8 65 aa10.13□□□□□ -0.79
SF3B3-215ENST00000577085 HIGD1CA8MV81 97 aa10.13□□□□□ -0.79
SF3B3-215ENST00000577085 PLA2G1BP04054 148 aaKnown RBP10.13□□□□□ -0.79
SF3B3-215ENST00000577085 SRP19P09132 144 aaKnown RBP10.13□□□□□ -0.79
SF3B3-215ENST00000577085 C20orf203Q8NBC4 194 aa10.13□□□□□ -0.79
SF3B3-215ENST00000577085 GFRA4Q9GZZ7 299 aa10.13□□□□□ -0.79
SF3B3-215ENST00000577085 IGLV4-60A0A075B6I1 120 aa10.12□□□□□ -0.79
SF3B3-215ENST00000577085 NCR2O95944 276 aa10.12□□□□□ -0.79
SF3B3-215ENST00000577085 APCSP02743 223 aa10.12□□□□□ -0.79
SF3B3-215ENST00000577085 FAM74A3Q4VXF1 159 aa10.12□□□□□ -0.79
SF3B3-215ENST00000577085 OSTCQ9NRP0 149 aa10.12□□□□□ -0.79
SF3B3-215ENST00000577085 FAM231BA6NCW3 169 aa10.11□□□□□ -0.79
SF3B3-215ENST00000577085 SDHAF1A6NFY7 115 aa10.11□□□□□ -0.79
SF3B3-215ENST00000577085 PMCHP20382 165 aa10.11□□□□□ -0.79
SF3B3-215ENST00000577085 TMEM241Q24JQ0 296 aa10.11□□□□□ -0.79
SF3B3-215ENST00000577085 DGAT2L7PQ6IED9 249 aa10.11□□□□□ -0.79
SF3B3-215ENST00000577085 RNASEKQ6P5S7 137 aaKnown RBP10.11□□□□□ -0.79
SF3B3-215ENST00000577085 SCXQ7RTU7 201 aa10.11□□□□□ -0.79
SF3B3-215ENST00000577085 LINC00528Q8N1L1 170 aa10.11□□□□□ -0.79
SF3B3-215ENST00000577085 CLRN3Q8NCR9 226 aa10.11□□□□□ -0.79
SF3B3-215ENST00000577085 IGKV3OR2-268A0A0C4DH90 116 aa10.1□□□□□ -0.79
SF3B3-215ENST00000577085 I3L3M4 83 aa10.1□□□□□ -0.79
SF3B3-215ENST00000577085 PRSS1P07477 247 aa10.1□□□□□ -0.79
SF3B3-215ENST00000577085 CHAC1Q9BUX1 264 aa10.1□□□□□ -0.79
SF3B3-215ENST00000577085 ST20Q9HBF5 79 aa10.1□□□□□ -0.79
SF3B3-215ENST00000577085 hDV102S1A0JD36 115 aa10.09□□□□□ -0.79
SF3B3-215ENST00000577085 RIGQ13278 110 aa10.09□□□□□ -0.79
SF3B3-215ENST00000577085 PEA15Q15121 130 aa10.09□□□□□ -0.79
SF3B3-215ENST00000577085 ADIRFQ15847 76 aa10.09□□□□□ -0.79
SF3B3-215ENST00000577085 BTF3L4Q96K17 158 aa10.09□□□□□ -0.79
SF3B3-215ENST00000577085 TMEM191AQ9H0A3 160 aa10.09□□□□□ -0.79
SF3B3-215ENST00000577085 AP5S1Q9NUS5 200 aa10.09□□□□□ -0.79
SF3B3-215ENST00000577085 FAT1Q14517 4588 aa10.09□□□□□ -0.79
SF3B3-215ENST00000577085 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.08□□□□□ -0.8
SF3B3-215ENST00000577085 IGKV2-29A2NJV5 120 aaPredicted RBP10.08□□□□□ -0.8
SF3B3-215ENST00000577085 H7C423 109 aa10.08□□□□□ -0.8
SF3B3-215ENST00000577085 MRAP2Q96G30 205 aa10.08□□□□□ -0.8
SF3B3-215ENST00000577085 TMEM101Q96IK0 257 aa10.08□□□□□ -0.8
SF3B3-215ENST00000577085 NAT8Q9UHE5 227 aa10.08□□□□□ -0.8
SF3B3-215ENST00000577085 KRTAP26-1Q6PEX3 210 aa10.07□□□□□ -0.8
SF3B3-215ENST00000577085 ISOC2Q96AB3 205 aa10.07□□□□□ -0.8
SF3B3-215ENST00000577085 NAT8BQ9UHF3 227 aa10.07□□□□□ -0.8
SF3B3-215ENST00000577085 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.06□□□□□ -0.8
SF3B3-215ENST00000577085 TRBV6-5A0A0K0K1A5 114 aa10.06□□□□□ -0.8
SF3B3-215ENST00000577085 FGF6P10767 208 aa10.06□□□□□ -0.8
SF3B3-215ENST00000577085 RPL23P62829 140 aaKnown RBP10.06□□□□□ -0.8
SF3B3-215ENST00000577085 CFAP161Q6P656 301 aa10.06□□□□□ -0.8
SF3B3-215ENST00000577085 AMN1Q8IY45 258 aa10.06□□□□□ -0.8
SF3B3-215ENST00000577085 NUP35Q8NFH5 326 aa10.06□□□□□ -0.8
SF3B3-215ENST00000577085 CIRBP-AS1Q8TBR5 109 aa10.06□□□□□ -0.8
SF3B3-215ENST00000577085 V9GYV3 84 aa10.06□□□□□ -0.8
SF3B3-215ENST00000577085 GAGE12HA6NDE8 117 aa10.05□□□□□ -0.8
SF3B3-215ENST00000577085 PPP1R17O96001 155 aa10.05□□□□□ -0.8
SF3B3-215ENST00000577085 ZNF25P17030 456 aaPredicted RBP10.05□□□□□ -0.8
SF3B3-215ENST00000577085 RAB4AP20338 218 aa10.05□□□□□ -0.8
SF3B3-215ENST00000577085 C9orf163Q8N9P6 203 aa10.05□□□□□ -0.8
SF3B3-215ENST00000577085 SMDT1Q9H4I9 107 aa10.05□□□□□ -0.8
SF3B3-215ENST00000577085 OR5A1Q8NGJ0 315 aa10.04□□□□□ -0.8
SF3B3-215ENST00000577085 TMEM242Q9NWH2 141 aa10.04□□□□□ -0.8
SF3B3-215ENST00000577085 FCER1GP30273 86 aa10.03□□□□□ -0.8
SF3B3-215ENST00000577085 CHCHD10Q8WYQ3 142 aaPredicted RBP10.03□□□□□ -0.8
SF3B3-215ENST00000577085 DPH3Q96FX2 82 aa10.03□□□□□ -0.8
SF3B3-215ENST00000577085 RNF185Q96GF1 192 aa10.03□□□□□ -0.8
SF3B3-215ENST00000577085 DNAH8Q96JB1 4490 aa10.03□□□□□ -0.8
SF3B3-215ENST00000577085 IGHV3-64A0A075B6Q5 118 aa10.02□□□□□ -0.81
SF3B3-215ENST00000577085 C9JQL5 133 aa10.02□□□□□ -0.81
SF3B3-215ENST00000577085 VCYO14598 125 aa10.02□□□□□ -0.81
SF3B3-215ENST00000577085 GAS8-AS1O95177 125 aa10.02□□□□□ -0.81
SF3B3-215ENST00000577085 TSHBP01222 138 aa10.02□□□□□ -0.81
SF3B3-215ENST00000577085 RPS10P46783 165 aaKnown RBP10.02□□□□□ -0.81
SF3B3-215ENST00000577085 CAMPP49913 170 aa10.02□□□□□ -0.81
SF3B3-215ENST00000577085 CNBPP62633 177 aaKnown RBP10.02□□□□□ -0.81
SF3B3-215ENST00000577085 SRSF3P84103 164 aaKnown RBP10.02□□□□□ -0.81
SF3B3-215ENST00000577085 TRBV27A0A0K0K1C4 114 aa10.01□□□□□ -0.81
SF3B3-215ENST00000577085 SMKR1H3BMG3 65 aa10.01□□□□□ -0.81
SF3B3-215ENST00000577085 SMAGPQ0VAQ4 97 aa10.01□□□□□ -0.81
SF3B3-215ENST00000577085 KIR2DL4Q99706 377 aa10.01□□□□□ -0.81
SF3B3-215ENST00000577085 VPS13BQ7Z7G8 4022 aa10.01□□□□□ -0.81
SF3B3-215ENST00000577085 SRRM2Q9UQ35 2752 aaKnown RBP10□□□□□ -0.81
SF3B3-215ENST00000577085 A0A1B0GW15 77 aa10□□□□□ -0.81
SF3B3-215ENST00000577085 SMIM27A0A1W2PRY6 76 aa10□□□□□ -0.81
SF3B3-215ENST00000577085 C7orf77A4D0Y5 90 aa10□□□□□ -0.81
SF3B3-215ENST00000577085 J3QL48 77 aa10□□□□□ -0.81
SF3B3-215ENST00000577085 PPP1R2P9O14990 202 aa9.99□□□□□ -0.81
SF3B3-215ENST00000577085 S100A8P05109 93 aa9.99□□□□□ -0.81
SF3B3-215ENST00000577085 ESDP10768 282 aa9.99□□□□□ -0.81
SF3B3-215ENST00000577085 XCL1P47992 114 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms