RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 G0S2P27469 103 aa11.47□□□□□ -0.57
ERCC4-208ENST00000576348 WWC2-AS2Q96NR7 200 aa11.47□□□□□ -0.57
ERCC4-208ENST00000576348 COL7A1Q02388 2944 aa11.46□□□□□ -0.57
ERCC4-208ENST00000576348 TRBV25-1A0A075B6N4 114 aa11.46□□□□□ -0.57
ERCC4-208ENST00000576348 IGHV1-24A0A0C4DH33 117 aa11.46□□□□□ -0.57
ERCC4-208ENST00000576348 BTF3P20290 206 aaKnown RBP11.46□□□□□ -0.57
ERCC4-208ENST00000576348 COA6Q5JTJ3 125 aaKnown RBP11.46□□□□□ -0.57
ERCC4-208ENST00000576348 HUWE1Q7Z6Z7 4374 aaKnown RBP11.45□□□□□ -0.58
ERCC4-208ENST00000576348 UBE2L6O14933 153 aa11.45□□□□□ -0.58
ERCC4-208ENST00000576348 S100A2P29034 98 aa11.45□□□□□ -0.58
ERCC4-208ENST00000576348 ZFAND6Q6FIF0 208 aa11.45□□□□□ -0.58
ERCC4-208ENST00000576348 MUC7Q8TAX7 377 aa11.45□□□□□ -0.58
ERCC4-208ENST00000576348 TMEM18Q96B42 140 aa11.45□□□□□ -0.58
ERCC4-208ENST00000576348 URB1-AS1Q96HZ7 61 aa11.45□□□□□ -0.58
ERCC4-208ENST00000576348 TMEM243Q9BU79 118 aa11.45□□□□□ -0.58
ERCC4-208ENST00000576348 DNAH9Q9NYC9 4486 aa11.45□□□□□ -0.58
ERCC4-208ENST00000576348 TRBV6-8A0A0A6YYG3 113 aa11.44□□□□□ -0.58
ERCC4-208ENST00000576348 LINC01546A6NGU7 62 aa11.44□□□□□ -0.58
ERCC4-208ENST00000576348 PDZD11Q5EBL8 140 aa11.44□□□□□ -0.58
ERCC4-208ENST00000576348 CHCHD5Q9BSY4 110 aa11.44□□□□□ -0.58
ERCC4-208ENST00000576348 HBDP02042 147 aa11.43□□□□□ -0.58
ERCC4-208ENST00000576348 SNRPEP62304 92 aaKnown RBP11.43□□□□□ -0.58
ERCC4-208ENST00000576348 PMCHL1Q16048 86 aa11.43□□□□□ -0.58
ERCC4-208ENST00000576348 CYSLTR1Q9Y271 337 aa11.43□□□□□ -0.58
ERCC4-208ENST00000576348 PRKDCP78527 4128 aaKnown RBP11.42□□□□□ -0.58
ERCC4-208ENST00000576348 TRAV8-6A0A0B4J262 113 aa11.42□□□□□ -0.58
ERCC4-208ENST00000576348 NUPR1O60356 82 aa11.42□□□□□ -0.58
ERCC4-208ENST00000576348 LINC00310P59036 64 aa11.42□□□□□ -0.58
ERCC4-208ENST00000576348 SMAGPQ0VAQ4 97 aa11.42□□□□□ -0.58
ERCC4-208ENST00000576348 LYPD5Q6UWN5 251 aa11.42□□□□□ -0.58
ERCC4-208ENST00000576348 FAM19A2Q8N3H0 131 aa11.42□□□□□ -0.58
ERCC4-208ENST00000576348 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.41□□□□□ -0.58
ERCC4-208ENST00000576348 IGKV2-29A2NJV5 120 aaPredicted RBP11.41□□□□□ -0.58
ERCC4-208ENST00000576348 ESDP10768 282 aa11.41□□□□□ -0.58
ERCC4-208ENST00000576348 CCL18P55774 89 aa11.41□□□□□ -0.58
ERCC4-208ENST00000576348 TCTAP57738 103 aa11.41□□□□□ -0.58
ERCC4-208ENST00000576348 TIRAPP58753 221 aa11.41□□□□□ -0.58
ERCC4-208ENST00000576348 LELP1Q5T871 98 aa11.41□□□□□ -0.58
ERCC4-208ENST00000576348 AMMECR1LQ6DCA0 310 aa11.41□□□□□ -0.58
ERCC4-208ENST00000576348 C2orf66Q6UXQ4 117 aa11.41□□□□□ -0.58
ERCC4-208ENST00000576348 NTM-AS1Q6ZSK4 140 aa11.41□□□□□ -0.58
ERCC4-208ENST00000576348 LINC01549A6NIU2 74 aa11.4□□□□□ -0.58
ERCC4-208ENST00000576348 TMEM262E9PQX1 116 aa11.4□□□□□ -0.58
ERCC4-208ENST00000576348 C20orf203Q8NBC4 194 aa11.4□□□□□ -0.58
ERCC4-208ENST00000576348 CHCHD7Q9BUK0 85 aa11.4□□□□□ -0.58
ERCC4-208ENST00000576348 PKIAP61925 76 aa11.39□□□□□ -0.59
ERCC4-208ENST00000576348 GAGE6Q13070 117 aa11.39□□□□□ -0.59
ERCC4-208ENST00000576348 ESRGQ1W209 222 aa11.39□□□□□ -0.59
ERCC4-208ENST00000576348 DGAT2L7PQ6IED9 249 aa11.39□□□□□ -0.59
ERCC4-208ENST00000576348 UBE2DNLQ8IWF7 75 aa11.39□□□□□ -0.59
ERCC4-208ENST00000576348 SCGB3A1Q96QR1 104 aa11.39□□□□□ -0.59
ERCC4-208ENST00000576348 C5orf52A6NGY3 159 aa11.38□□□□□ -0.59
ERCC4-208ENST00000576348 FABP4P15090 132 aa11.38□□□□□ -0.59
ERCC4-208ENST00000576348 RPL39P62891 51 aaKnown RBP11.38□□□□□ -0.59
ERCC4-208ENST00000576348 HIST3H2BBQ8N257 126 aa11.38□□□□□ -0.59
ERCC4-208ENST00000576348 TOMM6Q96B49 74 aa11.38□□□□□ -0.59
ERCC4-208ENST00000576348 TMEM101Q96IK0 257 aa11.38□□□□□ -0.59
ERCC4-208ENST00000576348 HSPB8Q9UJY1 196 aa11.38□□□□□ -0.59
ERCC4-208ENST00000576348 APLNQ9ULZ1 77 aa11.38□□□□□ -0.59
ERCC4-208ENST00000576348 H7C423 109 aa11.37□□□□□ -0.59
ERCC4-208ENST00000576348 LEPROTL1O95214 131 aa11.37□□□□□ -0.59
ERCC4-208ENST00000576348 A0A087WX48 190 aa11.36□□□□□ -0.59
ERCC4-208ENST00000576348 ATP5LO75964 103 aa11.36□□□□□ -0.59
ERCC4-208ENST00000576348 FGF6P10767 208 aa11.36□□□□□ -0.59
ERCC4-208ENST00000576348 OR5A1Q8NGJ0 315 aa11.36□□□□□ -0.59
ERCC4-208ENST00000576348 SPANXA1Q9NS26 97 aa11.36□□□□□ -0.59
ERCC4-208ENST00000576348 A0A096LNJ9 63 aa11.34□□□□□ -0.59
ERCC4-208ENST00000576348 C3orf84H3BNL1 204 aa11.34□□□□□ -0.59
ERCC4-208ENST00000576348 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.34□□□□□ -0.59
ERCC4-208ENST00000576348 Q6ZN92 141 aa11.34□□□□□ -0.59
ERCC4-208ENST00000576348 TMEM141Q96I45 108 aa11.34□□□□□ -0.59
ERCC4-208ENST00000576348 MRPS16Q9Y3D3 137 aaKnown RBP11.34□□□□□ -0.59
ERCC4-208ENST00000576348 TGP01266 2768 aa11.33□□□□□ -0.6
ERCC4-208ENST00000576348 ZNF25P17030 456 aaPredicted RBP11.33□□□□□ -0.6
ERCC4-208ENST00000576348 PAPPA-AS1Q5QFB9 102 aa11.33□□□□□ -0.6
ERCC4-208ENST00000576348 ERASQ7Z444 233 aa11.33□□□□□ -0.6
ERCC4-208ENST00000576348 PACRGQ96M98 296 aaPredicted RBP11.33□□□□□ -0.6
ERCC4-208ENST00000576348 HIST1H2BLQ99880 126 aa11.33□□□□□ -0.6
ERCC4-208ENST00000576348 TIMM21Q9BVV7 248 aa11.33□□□□□ -0.6
ERCC4-208ENST00000576348 LINC00588Q9Y4M8 146 aa11.33□□□□□ -0.6
ERCC4-208ENST00000576348 MRPL52Q86TS9 123 aaKnown RBP11.32□□□□□ -0.6
ERCC4-208ENST00000576348 IFI27L1Q96BM0 104 aa11.32□□□□□ -0.6
ERCC4-208ENST00000576348 TIMM17AQ99595 171 aa11.32□□□□□ -0.6
ERCC4-208ENST00000576348 UBE2D4Q9Y2X8 147 aa11.32□□□□□ -0.6
ERCC4-208ENST00000576348 PYGO1Q9Y3Y4 419 aa11.32□□□□□ -0.6
ERCC4-208ENST00000576348 WFDC10BQ8IUB3 73 aa11.31□□□□□ -0.6
ERCC4-208ENST00000576348 MAP1LC3CQ9BXW4 147 aa11.31□□□□□ -0.6
ERCC4-208ENST00000576348 IGIPA6NJ69 53 aa11.3□□□□□ -0.6
ERCC4-208ENST00000576348 H0Y8G0 127 aa11.3□□□□□ -0.6
ERCC4-208ENST00000576348 IGHV3-30P01768 117 aa11.3□□□□□ -0.6
ERCC4-208ENST00000576348 IGHV3-33P01772 117 aa11.3□□□□□ -0.6
ERCC4-208ENST00000576348 PRSS1P07477 247 aa11.3□□□□□ -0.6
ERCC4-208ENST00000576348 IGHV3-30-3P0DP02 117 aa11.3□□□□□ -0.6
ERCC4-208ENST00000576348 IGHV3-30-5P0DP03 117 aa11.3□□□□□ -0.6
ERCC4-208ENST00000576348 RBX1P62877 108 aa11.3□□□□□ -0.6
ERCC4-208ENST00000576348 VCX2Q9H322 139 aa11.3□□□□□ -0.6
ERCC4-208ENST00000576348 NPSP0C0P6 89 aa11.29□□□□□ -0.6
ERCC4-208ENST00000576348 KRTDAPP60985 99 aa11.29□□□□□ -0.6
ERCC4-208ENST00000576348 MPV17L2Q567V2 206 aa11.29□□□□□ -0.6
ERCC4-208ENST00000576348 CASC10Q5T4H9 136 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms