RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 ESRGQ1W209 222 aa5.46□□□□□ -1.54
CCDC40-215ENST00000576033 LGALS9CQ6DKI2 356 aa5.46□□□□□ -1.54
CCDC40-215ENST00000576033 FA2HQ7L5A8 372 aa5.46□□□□□ -1.54
CCDC40-215ENST00000576033 Q8N8P6 123 aa5.46□□□□□ -1.54
CCDC40-215ENST00000576033 SLC25A29Q8N8R3 303 aa5.46□□□□□ -1.54
CCDC40-215ENST00000576033 C20orf78Q9BR46 151 aa5.46□□□□□ -1.54
CCDC40-215ENST00000576033 MAP1LC3AQ9H492 121 aa5.46□□□□□ -1.54
CCDC40-215ENST00000576033 NXT2Q9NPJ8 142 aaKnown RBP5.46□□□□□ -1.54
CCDC40-215ENST00000576033 PKHD1P08F94 4074 aa5.46□□□□□ -1.54
CCDC40-215ENST00000576033 TRBV6-5A0A0K0K1A5 114 aa5.45□□□□□ -1.54
CCDC40-215ENST00000576033 K7EQD1 137 aa5.45□□□□□ -1.54
CCDC40-215ENST00000576033 PPP1R17O96001 155 aa5.45□□□□□ -1.54
CCDC40-215ENST00000576033 GYPEP15421 78 aa5.45□□□□□ -1.54
CCDC40-215ENST00000576033 PMCHL1Q16048 86 aa5.45□□□□□ -1.54
CCDC40-215ENST00000576033 SPATA12Q7Z6I5 190 aa5.45□□□□□ -1.54
CCDC40-215ENST00000576033 UBE2DNLQ8IWF7 75 aa5.45□□□□□ -1.54
CCDC40-215ENST00000576033 SYT8Q8NBV8 401 aa5.45□□□□□ -1.54
CCDC40-215ENST00000576033 PRSS3P2Q8NHM4 247 aa5.45□□□□□ -1.54
CCDC40-215ENST00000576033 SMIM2Q9BVW6 85 aa5.45□□□□□ -1.54
CCDC40-215ENST00000576033 KRTAP1-5Q9BYS1 174 aa5.45□□□□□ -1.54
CCDC40-215ENST00000576033 HHLA3Q9XRX5 114 aa5.45□□□□□ -1.54
CCDC40-215ENST00000576033 TRAV26-2A0A0B4J265 109 aa5.44□□□□□ -1.54
CCDC40-215ENST00000576033 K7EMI3 77 aa5.44□□□□□ -1.54
CCDC40-215ENST00000576033 LEPROTL1O95214 131 aa5.44□□□□□ -1.54
CCDC40-215ENST00000576033 HBDP02042 147 aa5.44□□□□□ -1.54
CCDC40-215ENST00000576033 BTF3P20290 206 aaKnown RBP5.44□□□□□ -1.54
CCDC40-215ENST00000576033 KRTDAPP60985 99 aa5.44□□□□□ -1.54
CCDC40-215ENST00000576033 SUMO4Q6EEV6 95 aa5.44□□□□□ -1.54
CCDC40-215ENST00000576033 LINC00173Q6ZV60 143 aa5.44□□□□□ -1.54
CCDC40-215ENST00000576033 Q8N3U1 123 aa5.44□□□□□ -1.54
CCDC40-215ENST00000576033 C15orf53Q8NAA6 179 aa5.44□□□□□ -1.54
CCDC40-215ENST00000576033 PRO0255Q9UI72 69 aa5.44□□□□□ -1.54
CCDC40-215ENST00000576033 LOC389332A0A1B0GUA5 103 aa5.43□□□□□ -1.54
CCDC40-215ENST00000576033 GAGE12JA6NER3 117 aa5.43□□□□□ -1.54
CCDC40-215ENST00000576033 SYS1-DBNDD2H3BUS1 97 aa5.43□□□□□ -1.54
CCDC40-215ENST00000576033 M0QY20 66 aa5.43□□□□□ -1.54
CCDC40-215ENST00000576033 SCGB1D1O95968 90 aa5.43□□□□□ -1.54
CCDC40-215ENST00000576033 FCER1GP30273 86 aa5.43□□□□□ -1.54
CCDC40-215ENST00000576033 POLR2KP53803 58 aaKnown RBP5.43□□□□□ -1.54
CCDC40-215ENST00000576033 TCTAP57738 103 aa5.43□□□□□ -1.54
CCDC40-215ENST00000576033 SUMO2P61956 95 aaKnown RBP5.43□□□□□ -1.54
CCDC40-215ENST00000576033 GAGE1Q13065 139 aa5.43□□□□□ -1.54
CCDC40-215ENST00000576033 GAGE4Q13068 117 aa5.43□□□□□ -1.54
CCDC40-215ENST00000576033 GAGE5Q13069 117 aa5.43□□□□□ -1.54
CCDC40-215ENST00000576033 GAGE13Q4V321 117 aa5.43□□□□□ -1.54
CCDC40-215ENST00000576033 WFDC10BQ8IUB3 73 aa5.43□□□□□ -1.54
CCDC40-215ENST00000576033 ZNF664Q8N3J9 261 aa5.43□□□□□ -1.54
CCDC40-215ENST00000576033 ZNRF2Q8NHG8 242 aa5.43□□□□□ -1.54
CCDC40-215ENST00000576033 DEFB104AQ8WTQ1 72 aa5.43□□□□□ -1.54
CCDC40-215ENST00000576033 RPL39LQ96EH5 51 aaKnown RBP5.43□□□□□ -1.54
CCDC40-215ENST00000576033 TMEM70Q9BUB7 260 aa5.43□□□□□ -1.54
CCDC40-215ENST00000576033 HSPB8Q9UJY1 196 aa5.43□□□□□ -1.54
CCDC40-215ENST00000576033 ICOSQ9Y6W8 199 aa5.43□□□□□ -1.54
CCDC40-215ENST00000576033 A8MWV9 139 aa5.42□□□□□ -1.54
CCDC40-215ENST00000576033 MGPP08493 103 aa5.42□□□□□ -1.54
CCDC40-215ENST00000576033 LINC00694P0DN24 101 aa5.42□□□□□ -1.54
CCDC40-215ENST00000576033 PKIAP61925 76 aa5.42□□□□□ -1.54
CCDC40-215ENST00000576033 ZNF56Q15929 161 aa5.42□□□□□ -1.54
CCDC40-215ENST00000576033 LINC01545Q5VT33 79 aa5.42□□□□□ -1.54
CCDC40-215ENST00000576033 PET117Q6UWS5 81 aa5.42□□□□□ -1.54
CCDC40-215ENST00000576033 IGHV3-38A0A0C4DH36 116 aa5.41□□□□□ -1.54
CCDC40-215ENST00000576033 TRBV27A0A0K0K1C4 114 aa5.41□□□□□ -1.54
CCDC40-215ENST00000576033 SMIM17P0DL12 118 aa5.41□□□□□ -1.54
CCDC40-215ENST00000576033 LAGE3Q14657 143 aa5.41□□□□□ -1.54
CCDC40-215ENST00000576033 RHOHQ15669 191 aa5.41□□□□□ -1.54
CCDC40-215ENST00000576033 DNAH5Q8TE73 4624 aa5.41□□□□□ -1.54
CCDC40-215ENST00000576033 TRBV6-4A0A1B0GX49 114 aa5.4□□□□□ -1.54
CCDC40-215ENST00000576033 H3BNG1 76 aa5.4□□□□□ -1.54
CCDC40-215ENST00000576033 RHODO00212 210 aa5.4□□□□□ -1.54
CCDC40-215ENST00000576033 LYPD5Q6UWN5 251 aa5.4□□□□□ -1.54
CCDC40-215ENST00000576033 ZFP2Q6ZN57 461 aa5.4□□□□□ -1.54
CCDC40-215ENST00000576033 NEXN-AS1Q8NBZ9 246 aa5.4□□□□□ -1.54
CCDC40-215ENST00000576033 IFI27L1Q96BM0 104 aa5.4□□□□□ -1.54
CCDC40-215ENST00000576033 MAP1LC3CQ9BXW4 147 aa5.4□□□□□ -1.54
CCDC40-215ENST00000576033 ST20Q9HBF5 79 aa5.4□□□□□ -1.54
CCDC40-215ENST00000576033 MRPS16Q9Y3D3 137 aaKnown RBP5.4□□□□□ -1.54
CCDC40-215ENST00000576033 TNFRSF18Q9Y5U5 241 aa5.4□□□□□ -1.54
CCDC40-215ENST00000576033 DYNC1H1Q14204 4646 aaKnown RBP5.39□□□□□ -1.55
CCDC40-215ENST00000576033 TRAV9-2A0A087WT02 112 aa5.39□□□□□ -1.55
CCDC40-215ENST00000576033 C20orf202A1L168 122 aa5.39□□□□□ -1.55
CCDC40-215ENST00000576033 LINC00587B1AMM8 73 aa5.39□□□□□ -1.55
CCDC40-215ENST00000576033 TCAPO15273 167 aa5.39□□□□□ -1.55
CCDC40-215ENST00000576033 CCL18P55774 89 aa5.39□□□□□ -1.55
CCDC40-215ENST00000576033 MRPL23Q16540 153 aaKnown RBP5.39□□□□□ -1.55
CCDC40-215ENST00000576033 ORMDL2Q53FV1 153 aa5.39□□□□□ -1.55
CCDC40-215ENST00000576033 Q6ZR54 194 aa5.39□□□□□ -1.55
CCDC40-215ENST00000576033 NEGR1Q7Z3B1 354 aa5.39□□□□□ -1.55
CCDC40-215ENST00000576033 TOMM6Q96B49 74 aa5.39□□□□□ -1.55
CCDC40-215ENST00000576033 NBDYA0A0U1RRE5 68 aa5.38□□□□□ -1.55
CCDC40-215ENST00000576033 SDHAF1A6NFY7 115 aa5.38□□□□□ -1.55
CCDC40-215ENST00000576033 LINC01549A6NIU2 74 aa5.38□□□□□ -1.55
CCDC40-215ENST00000576033 PCP4L1A6NKN8 68 aa5.38□□□□□ -1.55
CCDC40-215ENST00000576033 F5H697 171 aa5.38□□□□□ -1.55
CCDC40-215ENST00000576033 TSTD3H0UI37 97 aa5.38□□□□□ -1.55
CCDC40-215ENST00000576033 H7C1H1 209 aa5.38□□□□□ -1.55
CCDC40-215ENST00000576033 VCYO14598 125 aa5.38□□□□□ -1.55
CCDC40-215ENST00000576033 RTL8CO15255 209 aa5.38□□□□□ -1.55
CCDC40-215ENST00000576033 ATP5LO75964 103 aa5.38□□□□□ -1.55
CCDC40-215ENST00000576033 PRADC1Q9BSG0 188 aa5.38□□□□□ -1.55
CCDC40-215ENST00000576033 UPK3BQ9BT76 320 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms