RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 CHCHD5Q9BSY4 110 aa9.52□□□□□ -0.89
RPAIN-217ENST00000575711 LAMTOR2Q9Y2Q5 125 aa9.52□□□□□ -0.89
RPAIN-217ENST00000575711 KMT2AQ03164 3969 aa9.52□□□□□ -0.89
RPAIN-217ENST00000575711 DNAH6Q9C0G6 4158 aa9.52□□□□□ -0.89
RPAIN-217ENST00000575711 A0A087WX48 190 aa9.51□□□□□ -0.89
RPAIN-217ENST00000575711 TRBV27A0A0K0K1C4 114 aa9.51□□□□□ -0.89
RPAIN-217ENST00000575711 TMEM262E9PQX1 116 aa9.51□□□□□ -0.89
RPAIN-217ENST00000575711 K7EP13 123 aa9.51□□□□□ -0.89
RPAIN-217ENST00000575711 PKIAP61925 76 aa9.51□□□□□ -0.89
RPAIN-217ENST00000575711 Q6ZR54 194 aa9.51□□□□□ -0.89
RPAIN-217ENST00000575711 NIT1Q86X76 327 aa9.51□□□□□ -0.89
RPAIN-217ENST00000575711 C10orf126Q8N4M7 172 aa9.51□□□□□ -0.89
RPAIN-217ENST00000575711 TMEM243Q9BU79 118 aa9.51□□□□□ -0.89
RPAIN-217ENST00000575711 IGHV3-30P01768 117 aa9.5□□□□□ -0.89
RPAIN-217ENST00000575711 IGHV3-33P01772 117 aa9.5□□□□□ -0.89
RPAIN-217ENST00000575711 IGHV3-30-3P0DP02 117 aa9.5□□□□□ -0.89
RPAIN-217ENST00000575711 IGHV3-30-5P0DP03 117 aa9.5□□□□□ -0.89
RPAIN-217ENST00000575711 RPL32P62910 135 aaKnown RBP9.5□□□□□ -0.89
RPAIN-217ENST00000575711 KIR2DL4Q99706 377 aa9.5□□□□□ -0.89
RPAIN-217ENST00000575711 CHCHD7Q9BUK0 85 aa9.5□□□□□ -0.89
RPAIN-217ENST00000575711 MRPL18Q9H0U6 180 aaKnown RBP9.5□□□□□ -0.89
RPAIN-217ENST00000575711 UBE2L6O14933 153 aa9.49□□□□□ -0.89
RPAIN-217ENST00000575711 TSHBP01222 138 aa9.49□□□□□ -0.89
RPAIN-217ENST00000575711 FCER1GP30273 86 aa9.49□□□□□ -0.89
RPAIN-217ENST00000575711 FABP9Q0Z7S8 132 aa9.49□□□□□ -0.89
RPAIN-217ENST00000575711 KIAA1644Q3SXP7 199 aa9.49□□□□□ -0.89
RPAIN-217ENST00000575711 YPEL4Q96NS1 127 aa9.49□□□□□ -0.89
RPAIN-217ENST00000575711 SMIM2Q9BVW6 85 aa9.49□□□□□ -0.89
RPAIN-217ENST00000575711 KRTAP1-5Q9BYS1 174 aa9.49□□□□□ -0.89
RPAIN-217ENST00000575711 MAP1LC3AQ9H492 121 aa9.49□□□□□ -0.89
RPAIN-217ENST00000575711 TRAPPC1Q9Y5R8 145 aa9.49□□□□□ -0.89
RPAIN-217ENST00000575711 GAGE6Q13070 117 aa9.48□□□□□ -0.89
RPAIN-217ENST00000575711 Q8N3U1 123 aa9.48□□□□□ -0.89
RPAIN-217ENST00000575711 TCAPO15273 167 aa9.47□□□□□ -0.89
RPAIN-217ENST00000575711 BTF3P20290 206 aaKnown RBP9.47□□□□□ -0.89
RPAIN-217ENST00000575711 C1orf134Q5TEV5 83 aa9.47□□□□□ -0.89
RPAIN-217ENST00000575711 RYR3Q15413 4870 aa9.47□□□□□ -0.89
RPAIN-217ENST00000575711 LOC389332A0A1B0GUA5 103 aa9.46□□□□□ -0.9
RPAIN-217ENST00000575711 PRSS47A8MTI9 375 aa9.46□□□□□ -0.9
RPAIN-217ENST00000575711 MPV17L2Q567V2 206 aa9.46□□□□□ -0.9
RPAIN-217ENST00000575711 C6orf223Q8N319 242 aa9.46□□□□□ -0.9
RPAIN-217ENST00000575711 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.45□□□□□ -0.9
RPAIN-217ENST00000575711 IGKV2-29A2NJV5 120 aaPredicted RBP9.45□□□□□ -0.9
RPAIN-217ENST00000575711 IBA57-AS1B1ANH7 110 aa9.45□□□□□ -0.9
RPAIN-217ENST00000575711 H7C423 109 aa9.45□□□□□ -0.9
RPAIN-217ENST00000575711 ESDP10768 282 aa9.45□□□□□ -0.9
RPAIN-217ENST00000575711 S100A1P23297 94 aa9.45□□□□□ -0.9
RPAIN-217ENST00000575711 ALKBH7Q9BT30 221 aaPredicted RBP9.45□□□□□ -0.9
RPAIN-217ENST00000575711 ATP6V1G1O75348 118 aa9.44□□□□□ -0.9
RPAIN-217ENST00000575711 ANGP03950 147 aaKnown RBP9.44□□□□□ -0.9
RPAIN-217ENST00000575711 RAB5AP20339 215 aa9.44□□□□□ -0.9
RPAIN-217ENST00000575711 RBX1P62877 108 aa9.44□□□□□ -0.9
RPAIN-217ENST00000575711 LAGE3Q14657 143 aa9.44□□□□□ -0.9
RPAIN-217ENST00000575711 AMMECR1LQ6DCA0 310 aa9.44□□□□□ -0.9
RPAIN-217ENST00000575711 Q8N8P6 123 aa9.44□□□□□ -0.9
RPAIN-217ENST00000575711 Q8N976 141 aa9.44□□□□□ -0.9
RPAIN-217ENST00000575711 KLK12Q9UKR0 248 aa9.44□□□□□ -0.9
RPAIN-217ENST00000575711 A0A1B0GUV1 79 aa9.43□□□□□ -0.9
RPAIN-217ENST00000575711 SCO1O75880 301 aa9.43□□□□□ -0.9
RPAIN-217ENST00000575711 NFE4Q86UQ8 179 aa9.43□□□□□ -0.9
RPAIN-217ENST00000575711 TMEM18Q96B42 140 aa9.43□□□□□ -0.9
RPAIN-217ENST00000575711 NXT2Q9NPJ8 142 aaKnown RBP9.43□□□□□ -0.9
RPAIN-217ENST00000575711 TRAV8-3A0A0A6YYJ7 113 aa9.42□□□□□ -0.9
RPAIN-217ENST00000575711 CRPP02741 224 aa9.42□□□□□ -0.9
RPAIN-217ENST00000575711 FGF6P10767 208 aa9.42□□□□□ -0.9
RPAIN-217ENST00000575711 SMAGPQ0VAQ4 97 aa9.42□□□□□ -0.9
RPAIN-217ENST00000575711 LCE2AQ5TA79 106 aaPredicted RBP9.42□□□□□ -0.9
RPAIN-217ENST00000575711 RNASEKQ6P5S7 137 aaKnown RBP9.42□□□□□ -0.9
RPAIN-217ENST00000575711 Q9HAA7 133 aa9.42□□□□□ -0.9
RPAIN-217ENST00000575711 K7EMI3 77 aa9.41□□□□□ -0.9
RPAIN-217ENST00000575711 ZNF25P17030 456 aaPredicted RBP9.41□□□□□ -0.9
RPAIN-217ENST00000575711 IFI27P40305 119 aaPredicted RBP9.41□□□□□ -0.9
RPAIN-217ENST00000575711 C20orf203Q8NBC4 194 aa9.41□□□□□ -0.9
RPAIN-217ENST00000575711 PRSS3P2Q8NHM4 247 aa9.41□□□□□ -0.9
RPAIN-217ENST00000575711 UBE2WQ96B02 151 aa9.41□□□□□ -0.9
RPAIN-217ENST00000575711 TMEM101Q96IK0 257 aa9.41□□□□□ -0.9
RPAIN-217ENST00000575711 IGLV4-60A0A075B6I1 120 aa9.4□□□□□ -0.9
RPAIN-217ENST00000575711 COLCA2A8K830 154 aa9.4□□□□□ -0.9
RPAIN-217ENST00000575711 RTL8CO15255 209 aa9.4□□□□□ -0.9
RPAIN-217ENST00000575711 Q0VG73 95 aa9.4□□□□□ -0.9
RPAIN-217ENST00000575711 ORMDL2Q53FV1 153 aa9.4□□□□□ -0.9
RPAIN-217ENST00000575711 DGAT2L7PQ6IED9 249 aa9.39□□□□□ -0.91
RPAIN-217ENST00000575711 LINC00336Q6ZUF6 198 aa9.39□□□□□ -0.91
RPAIN-217ENST00000575711 MRPL52Q86TS9 123 aaKnown RBP9.39□□□□□ -0.91
RPAIN-217ENST00000575711 LINC00269Q8N2A0 174 aa9.39□□□□□ -0.91
RPAIN-217ENST00000575711 OR5A1Q8NGJ0 315 aa9.39□□□□□ -0.91
RPAIN-217ENST00000575711 REG3AQ06141 175 aa9.38□□□□□ -0.91
RPAIN-217ENST00000575711 CLPSL2Q6UWE3 100 aa9.38□□□□□ -0.91
RPAIN-217ENST00000575711 ENHOQ6UWT2 76 aa9.38□□□□□ -0.91
RPAIN-217ENST00000575711 FA2HQ7L5A8 372 aa9.38□□□□□ -0.91
RPAIN-217ENST00000575711 RMI2Q96E14 147 aa9.38□□□□□ -0.91
RPAIN-217ENST00000575711 PRR34Q9NV39 138 aa9.38□□□□□ -0.91
RPAIN-217ENST00000575711 UBE2D4Q9Y2X8 147 aa9.38□□□□□ -0.91
RPAIN-217ENST00000575711 DNAH2Q9P225 4427 aa9.37□□□□□ -0.91
RPAIN-217ENST00000575711 PSCAO43653 123 aa9.37□□□□□ -0.91
RPAIN-217ENST00000575711 TRGC2P03986 189 aa9.37□□□□□ -0.91
RPAIN-217ENST00000575711 G0S2P27469 103 aa9.37□□□□□ -0.91
RPAIN-217ENST00000575711 RPL39P62891 51 aaKnown RBP9.37□□□□□ -0.91
RPAIN-217ENST00000575711 MIAQ16674 131 aa9.37□□□□□ -0.91
RPAIN-217ENST00000575711 Q6ZRN7 208 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms