RNA–Protein interactions for RNA: ENST00000575547.1

POLR2A-204, Transcript of RNA polymerase II subunit A, humanhuman

TSL 3

Gene POLR2A, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-204ENST00000575547 KRTAP26-1Q6PEX3 210 aa4.22□□□□□ -1.73
POLR2A-204ENST00000575547 LYZL1Q6UWQ5 148 aa4.22□□□□□ -1.73
POLR2A-204ENST00000575547 SDIM1Q6ZPB5 146 aa4.22□□□□□ -1.73
POLR2A-204ENST00000575547 C20orf203Q8NBC4 194 aa4.22□□□□□ -1.73
POLR2A-204ENST00000575547 C11orf52Q96A22 123 aa4.22□□□□□ -1.73
POLR2A-204ENST00000575547 DPH3P1Q9H4G8 78 aa4.22□□□□□ -1.73
POLR2A-204ENST00000575547 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.22□□□□□ -1.73
POLR2A-204ENST00000575547 IGLV4-60A0A075B6I1 120 aa4.21□□□□□ -1.74
POLR2A-204ENST00000575547 TRAV1-1A0A0B4J248 108 aa4.21□□□□□ -1.74
POLR2A-204ENST00000575547 C19orf71A6NCJ1 209 aa4.21□□□□□ -1.74
POLR2A-204ENST00000575547 PDE6DO43924 150 aa4.21□□□□□ -1.74
POLR2A-204ENST00000575547 AMTP48728 403 aa4.21□□□□□ -1.74
POLR2A-204ENST00000575547 CNBPP62633 177 aaKnown RBP4.21□□□□□ -1.74
POLR2A-204ENST00000575547 MEF2BQ02080 365 aaPredicted RBP4.21□□□□□ -1.74
POLR2A-204ENST00000575547 SMIM15Q7Z3B0 74 aa4.21□□□□□ -1.74
POLR2A-204ENST00000575547 GAGE12HA6NDE8 117 aa4.2□□□□□ -1.74
POLR2A-204ENST00000575547 PANO1I0J062 215 aa4.2□□□□□ -1.74
POLR2A-204ENST00000575547 AMMECR1LQ6DCA0 310 aa4.2□□□□□ -1.74
POLR2A-204ENST00000575547 RNASEKQ6P5S7 137 aaKnown RBP4.2□□□□□ -1.74
POLR2A-204ENST00000575547 C9orf62Q8N4C0 152 aa4.2□□□□□ -1.74
POLR2A-204ENST00000575547 NUDT10Q8NFP7 164 aa4.2□□□□□ -1.74
POLR2A-204ENST00000575547 SMIM12Q96EX1 92 aa4.2□□□□□ -1.74
POLR2A-204ENST00000575547 NUDT11Q96G61 164 aa4.2□□□□□ -1.74
POLR2A-204ENST00000575547 PGLYRP4Q96LB8 373 aa4.2□□□□□ -1.74
POLR2A-204ENST00000575547 A0A087WYN8 130 aa4.19□□□□□ -1.74
POLR2A-204ENST00000575547 SLPIP03973 132 aa4.19□□□□□ -1.74
POLR2A-204ENST00000575547 RPS10P46783 165 aaKnown RBP4.19□□□□□ -1.74
POLR2A-204ENST00000575547 HNRNPA3P51991 378 aaKnown RBP4.19□□□□□ -1.74
POLR2A-204ENST00000575547 Q6ZRU5 148 aa4.19□□□□□ -1.74
POLR2A-204ENST00000575547 C7orf33Q8WU49 177 aa4.19□□□□□ -1.74
POLR2A-204ENST00000575547 RNF185Q96GF1 192 aa4.19□□□□□ -1.74
POLR2A-204ENST00000575547 GFRA4Q9GZZ7 299 aa4.19□□□□□ -1.74
POLR2A-204ENST00000575547 HMCN2Q8NDA2 5059 aa4.18□□□□□ -1.74
POLR2A-204ENST00000575547 TRAV26-2A0A0B4J265 109 aa4.18□□□□□ -1.74
POLR2A-204ENST00000575547 CHTF8P0CG12 524 aa4.18□□□□□ -1.74
POLR2A-204ENST00000575547 BCL2P10415 239 aa4.18□□□□□ -1.74
POLR2A-204ENST00000575547 PMCHP20382 165 aa4.18□□□□□ -1.74
POLR2A-204ENST00000575547 TAGLN2P37802 199 aaKnown RBP4.18□□□□□ -1.74
POLR2A-204ENST00000575547 COX6A2Q02221 97 aa4.18□□□□□ -1.74
POLR2A-204ENST00000575547 MAJINQ3KP22 176 aa4.18□□□□□ -1.74
POLR2A-204ENST00000575547 HIGD2BQ4VC39 106 aa4.18□□□□□ -1.74
POLR2A-204ENST00000575547 GATD1Q8NB37 220 aa4.18□□□□□ -1.74
POLR2A-204ENST00000575547 OCC1Q8TAD7 63 aa4.18□□□□□ -1.74
POLR2A-204ENST00000575547 GTSF1Q8WW33 167 aa4.18□□□□□ -1.74
POLR2A-204ENST00000575547 CHCHD10Q8WYQ3 142 aaPredicted RBP4.18□□□□□ -1.74
POLR2A-204ENST00000575547 BTF3L4Q96K17 158 aa4.18□□□□□ -1.74
POLR2A-204ENST00000575547 RNASE7Q9H1E1 156 aaKnown RBP4.18□□□□□ -1.74
POLR2A-204ENST00000575547 RPP21Q9H633 154 aaKnown RBP4.18□□□□□ -1.74
POLR2A-204ENST00000575547 TRBV20OR9-2A0A075B6H5 130 aa4.17□□□□□ -1.74
POLR2A-204ENST00000575547 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.17□□□□□ -1.74
POLR2A-204ENST00000575547 IGKV2-24A0A0C4DH68 120 aa4.17□□□□□ -1.74
POLR2A-204ENST00000575547 IGKV2-29A2NJV5 120 aaPredicted RBP4.17□□□□□ -1.74
POLR2A-204ENST00000575547 GATCO43716 136 aaKnown RBP4.17□□□□□ -1.74
POLR2A-204ENST00000575547 NDUFS6O75380 124 aaKnown RBP4.17□□□□□ -1.74
POLR2A-204ENST00000575547 NCR2O95944 276 aa4.17□□□□□ -1.74
POLR2A-204ENST00000575547 APCSP02743 223 aa4.17□□□□□ -1.74
POLR2A-204ENST00000575547 CTRLP40313 264 aa4.17□□□□□ -1.74
POLR2A-204ENST00000575547 FOXA3P55318 350 aaPredicted RBP4.17□□□□□ -1.74
POLR2A-204ENST00000575547 CIRBPQ14011 172 aaKnown RBP4.17□□□□□ -1.74
POLR2A-204ENST00000575547 TEX261Q6UWH6 196 aa4.17□□□□□ -1.74
POLR2A-204ENST00000575547 SLC51BQ86UW2 128 aa4.17□□□□□ -1.74
POLR2A-204ENST00000575547 LYPD6BQ8NI32 183 aa4.17□□□□□ -1.74
POLR2A-204ENST00000575547 SPACA4Q8TDM5 124 aa4.17□□□□□ -1.74
POLR2A-204ENST00000575547 BORCS7Q96B45 105 aa4.17□□□□□ -1.74
POLR2A-204ENST00000575547 RPL39LQ96EH5 51 aaKnown RBP4.17□□□□□ -1.74
POLR2A-204ENST00000575547 TMEM101Q96IK0 257 aa4.17□□□□□ -1.74
POLR2A-204ENST00000575547 UBR4Q5T4S7 5183 aa4.17□□□□□ -1.74
POLR2A-204ENST00000575547 A8MWL6 223 aa4.16□□□□□ -1.74
POLR2A-204ENST00000575547 H7C423 109 aa4.16□□□□□ -1.74
POLR2A-204ENST00000575547 I3L3M4 83 aa4.16□□□□□ -1.74
POLR2A-204ENST00000575547 PHOX2AO14813 284 aa4.16□□□□□ -1.74
POLR2A-204ENST00000575547 FGF6P10767 208 aa4.16□□□□□ -1.74
POLR2A-204ENST00000575547 CEBPGP53567 150 aa4.16□□□□□ -1.74
POLR2A-204ENST00000575547 Q6ZNX1 250 aa4.16□□□□□ -1.74
POLR2A-204ENST00000575547 STPG4Q8N801 248 aa4.16□□□□□ -1.74
POLR2A-204ENST00000575547 C15orf56Q8N910 161 aa4.16□□□□□ -1.74
POLR2A-204ENST00000575547 PRSS3P2Q8NHM4 247 aa4.16□□□□□ -1.74
POLR2A-204ENST00000575547 PLAC8Q9NZF1 115 aa4.16□□□□□ -1.74
POLR2A-204ENST00000575547 SDHAF1A6NFY7 115 aa4.15□□□□□ -1.75
POLR2A-204ENST00000575547 K7EN84 100 aa4.15□□□□□ -1.75
POLR2A-204ENST00000575547 XCL1P47992 114 aa4.15□□□□□ -1.75
POLR2A-204ENST00000575547 BLOC1S1P78537 153 aa4.15□□□□□ -1.75
POLR2A-204ENST00000575547 SS18Q15532 418 aa4.15□□□□□ -1.75
POLR2A-204ENST00000575547 OR5A1Q8NGJ0 315 aa4.15□□□□□ -1.75
POLR2A-204ENST00000575547 CNFNQ9BYD5 112 aa4.15□□□□□ -1.75
POLR2A-204ENST00000575547 ST20Q9HBF5 79 aa4.15□□□□□ -1.75
POLR2A-204ENST00000575547 PKIGQ9Y2B9 76 aa4.15□□□□□ -1.75
POLR2A-204ENST00000575547 IGHV1-58A0A0C4DH39 117 aa4.14□□□□□ -1.75
POLR2A-204ENST00000575547 LINC00959A0A1B0GUT2 108 aa4.14□□□□□ -1.75
POLR2A-204ENST00000575547 ZNF561-AS1K7EIQ3 104 aa4.14□□□□□ -1.75
POLR2A-204ENST00000575547 CCL25O15444 150 aa4.14□□□□□ -1.75
POLR2A-204ENST00000575547 MT1HL1P0DM35 61 aa4.14□□□□□ -1.75
POLR2A-204ENST00000575547 ZNF25P17030 456 aaPredicted RBP4.14□□□□□ -1.75
POLR2A-204ENST00000575547 FOXI1Q12951 378 aa4.14□□□□□ -1.75
POLR2A-204ENST00000575547 TCTE3Q8IZS6 198 aa4.14□□□□□ -1.75
POLR2A-204ENST00000575547 LINC00526Q96FQ7 95 aa4.14□□□□□ -1.75
POLR2A-204ENST00000575547 LINC00474Q9P2X8 69 aa4.14□□□□□ -1.75
POLR2A-204ENST00000575547 GVQW2A0A096LPI5 108 aaPredicted RBP4.13□□□□□ -1.75
POLR2A-204ENST00000575547 TRBV6-5A0A0K0K1A5 114 aa4.13□□□□□ -1.75
POLR2A-204ENST00000575547 FAM231BA6NCW3 169 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms