RNA–Protein interactions for RNA: ENST00000574997.1

TRIM25-209, Transcript of tripartite motif containing 25, human

TSL 3

Gene TRIM25, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM25-209	ENST00000574997		H7C423	109 aa		4.13	□□□□□ -1.75
TRIM25-209	ENST00000574997	UBE2L6	O14933	153 aa		4.13	□□□□□ -1.75
TRIM25-209	ENST00000574997	H2AFB1	P0C5Y9	115 aa		4.13	□□□□□ -1.75
TRIM25-209	ENST00000574997	PCP4	P48539	62 aa		4.13	□□□□□ -1.75
TRIM25-209	ENST00000574997	GAGE6	Q13070	117 aa		4.13	□□□□□ -1.75
TRIM25-209	ENST00000574997	RASL11A	Q6T310	242 aa		4.13	□□□□□ -1.75
TRIM25-209	ENST00000574997	KCNRG	Q8N5I3	272 aa		4.13	□□□□□ -1.75
TRIM25-209	ENST00000574997	MANBAL	Q9NQG1	85 aa		4.13	□□□□□ -1.75
TRIM25-209	ENST00000574997	NIT2	Q9NQR4	276 aa		4.13	□□□□□ -1.75
TRIM25-209	ENST00000574997	CYTL1	Q9NRR1	136 aa		4.13	□□□□□ -1.75
TRIM25-209	ENST00000574997	PLAC8	Q9NZF1	115 aa		4.13	□□□□□ -1.75
TRIM25-209	ENST00000574997	IGLV10-54	A0A075B6I4	117 aa		4.12	□□□□□ -1.75
TRIM25-209	ENST00000574997		A0A087WYN8	130 aa		4.12	□□□□□ -1.75
TRIM25-209	ENST00000574997	HMSD	A8MTL9	139 aa		4.12	□□□□□ -1.75
TRIM25-209	ENST00000574997	ARPC5	O15511	151 aa		4.12	□□□□□ -1.75
TRIM25-209	ENST00000574997	NDUFS6	O75380	124 aa	Known RBP	4.12	□□□□□ -1.75
TRIM25-209	ENST00000574997	NCR2	O95944	276 aa		4.12	□□□□□ -1.75
TRIM25-209	ENST00000574997	MT1HL1	P0DM35	61 aa		4.12	□□□□□ -1.75
TRIM25-209	ENST00000574997	RPS10	P46783	165 aa	Known RBP	4.12	□□□□□ -1.75
TRIM25-209	ENST00000574997	RAB5C	P51148	216 aa		4.12	□□□□□ -1.75
TRIM25-209	ENST00000574997	COTL1	Q14019	142 aa		4.12	□□□□□ -1.75
TRIM25-209	ENST00000574997	EIF5AL1	Q6IS14	154 aa	Known RBP	4.12	□□□□□ -1.75
TRIM25-209	ENST00000574997	TEX261	Q6UWH6	196 aa		4.12	□□□□□ -1.75
TRIM25-209	ENST00000574997	C9orf62	Q8N4C0	152 aa		4.12	□□□□□ -1.75
TRIM25-209	ENST00000574997	FER1L6-AS1	Q8NA97	138 aa		4.12	□□□□□ -1.75
TRIM25-209	ENST00000574997	C20orf203	Q8NBC4	194 aa		4.12	□□□□□ -1.75
TRIM25-209	ENST00000574997	SPACA4	Q8TDM5	124 aa		4.12	□□□□□ -1.75
TRIM25-209	ENST00000574997	LINC01600	Q96MT4	127 aa		4.12	□□□□□ -1.75
TRIM25-209	ENST00000574997	TRAV1-1	A0A0B4J248	108 aa		4.11	□□□□□ -1.75
TRIM25-209	ENST00000574997	SCO2	A0A1W2PP80	73 aa		4.11	□□□□□ -1.75
TRIM25-209	ENST00000574997	KANTR	A0A1W2PQU2	76 aa		4.11	□□□□□ -1.75
TRIM25-209	ENST00000574997	PDE6D	O43924	150 aa		4.11	□□□□□ -1.75
TRIM25-209	ENST00000574997	IGLC6	P0CF74	106 aa		4.11	□□□□□ -1.75
TRIM25-209	ENST00000574997	RPL35	P42766	123 aa	Known RBP	4.11	□□□□□ -1.75
TRIM25-209	ENST00000574997	SULT1A2	P50226	295 aa		4.11	□□□□□ -1.75
TRIM25-209	ENST00000574997	HNRNPA3	P51991	378 aa	Known RBP	4.11	□□□□□ -1.75
TRIM25-209	ENST00000574997	CCL20	P78556	96 aa		4.11	□□□□□ -1.75
TRIM25-209	ENST00000574997	OR2D3	Q8NGH3	330 aa		4.11	□□□□□ -1.75
TRIM25-209	ENST00000574997	FAM213B	Q8TBF2	198 aa		4.11	□□□□□ -1.75
TRIM25-209	ENST00000574997	C11orf52	Q96A22	123 aa		4.11	□□□□□ -1.75
TRIM25-209	ENST00000574997	IGLV4-60	A0A075B6I1	120 aa		4.1	□□□□□ -1.75
TRIM25-209	ENST00000574997	C19orf71	A6NCJ1	209 aa		4.1	□□□□□ -1.75
TRIM25-209	ENST00000574997	PANO1	I0J062	215 aa		4.1	□□□□□ -1.75
TRIM25-209	ENST00000574997	IFNA1	P01562	189 aa		4.1	□□□□□ -1.75
TRIM25-209	ENST00000574997	MGP	P08493	103 aa		4.1	□□□□□ -1.75
TRIM25-209	ENST00000574997	ZNF25	P17030	456 aa	Predicted RBP	4.1	□□□□□ -1.75
TRIM25-209	ENST00000574997	NTF3	P20783	257 aa		4.1	□□□□□ -1.75
TRIM25-209	ENST00000574997	TAGLN2	P37802	199 aa	Known RBP	4.1	□□□□□ -1.75
TRIM25-209	ENST00000574997	AMT	P48728	403 aa		4.1	□□□□□ -1.75
TRIM25-209	ENST00000574997	GNG4	P50150	75 aa		4.1	□□□□□ -1.75
TRIM25-209	ENST00000574997	NKX2-5	P52952	324 aa	Predicted RBP	4.1	□□□□□ -1.75
TRIM25-209	ENST00000574997	SUMO4	Q6EEV6	95 aa		4.1	□□□□□ -1.75
TRIM25-209	ENST00000574997	REG3G	Q6UW15	175 aa		4.1	□□□□□ -1.75
TRIM25-209	ENST00000574997	CLPSL2	Q6UWE3	100 aa		4.1	□□□□□ -1.75
TRIM25-209	ENST00000574997	SPINK6	Q6UWN8	80 aa		4.1	□□□□□ -1.75
TRIM25-209	ENST00000574997	SMIM15	Q7Z3B0	74 aa		4.1	□□□□□ -1.75
TRIM25-209	ENST00000574997	MUC21	A0A0G2JKD1	596 aa		4.09	□□□□□ -1.75
TRIM25-209	ENST00000574997	MUC21	A0A140T8X8	626 aa		4.09	□□□□□ -1.75
TRIM25-209	ENST00000574997		G3V3Q6	166 aa		4.09	□□□□□ -1.75
TRIM25-209	ENST00000574997		H3BS24	57 aa		4.09	□□□□□ -1.75
TRIM25-209	ENST00000574997	SLPI	P03973	132 aa		4.09	□□□□□ -1.75
TRIM25-209	ENST00000574997	SST	P61278	116 aa		4.09	□□□□□ -1.75
TRIM25-209	ENST00000574997	COX6A2	Q02221	97 aa		4.09	□□□□□ -1.75
TRIM25-209	ENST00000574997	RGS21	Q2M5E4	152 aa		4.09	□□□□□ -1.75
TRIM25-209	ENST00000574997	AMMECR1L	Q6DCA0	310 aa		4.09	□□□□□ -1.75
TRIM25-209	ENST00000574997	TPPP3	Q9BW30	176 aa		4.09	□□□□□ -1.75
TRIM25-209	ENST00000574997	CNFN	Q9BYD5	112 aa		4.09	□□□□□ -1.75
TRIM25-209	ENST00000574997	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.09	□□□□□ -1.75
TRIM25-209	ENST00000574997	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.08	□□□□□ -1.76
TRIM25-209	ENST00000574997		A0A0J9YXV3	536 aa		4.08	□□□□□ -1.76
TRIM25-209	ENST00000574997	GAGE12H	A6NDE8	117 aa		4.08	□□□□□ -1.76
TRIM25-209	ENST00000574997	PHOX2A	O14813	284 aa		4.08	□□□□□ -1.76
TRIM25-209	ENST00000574997	CCL25	O15444	150 aa		4.08	□□□□□ -1.76
TRIM25-209	ENST00000574997	BCL2L11	O43521	198 aa		4.08	□□□□□ -1.76
TRIM25-209	ENST00000574997	CAMP	P49913	170 aa		4.08	□□□□□ -1.76
TRIM25-209	ENST00000574997	MEF2B	Q02080	365 aa	Predicted RBP	4.08	□□□□□ -1.76
TRIM25-209	ENST00000574997	SMAGP	Q0VAQ4	97 aa		4.08	□□□□□ -1.76
TRIM25-209	ENST00000574997	CENPW	Q5EE01	88 aa		4.08	□□□□□ -1.76
TRIM25-209	ENST00000574997	LYZL1	Q6UWQ5	148 aa		4.08	□□□□□ -1.76
TRIM25-209	ENST00000574997	STPG4	Q8N801	248 aa		4.08	□□□□□ -1.76
TRIM25-209	ENST00000574997	GTSF1	Q8WW33	167 aa		4.08	□□□□□ -1.76
TRIM25-209	ENST00000574997	TMEM101	Q96IK0	257 aa		4.08	□□□□□ -1.76
TRIM25-209	ENST00000574997	BTF3L4	Q96K17	158 aa		4.08	□□□□□ -1.76
TRIM25-209	ENST00000574997	GNG13	Q9P2W3	67 aa		4.08	□□□□□ -1.76
TRIM25-209	ENST00000574997	IGHV1-58	A0A0C4DH39	117 aa		4.07	□□□□□ -1.76
TRIM25-209	ENST00000574997		H0Y8G0	127 aa		4.07	□□□□□ -1.76
TRIM25-209	ENST00000574997	CTRL	P40313	264 aa		4.07	□□□□□ -1.76
TRIM25-209	ENST00000574997	PRR3	P79522	188 aa	Known RBP	4.07	□□□□□ -1.76
TRIM25-209	ENST00000574997	TWIST1	Q15672	202 aa		4.07	□□□□□ -1.76
TRIM25-209	ENST00000574997		Q6ZRP5	223 aa		4.07	□□□□□ -1.76
TRIM25-209	ENST00000574997	C15orf56	Q8N910	161 aa		4.07	□□□□□ -1.76
TRIM25-209	ENST00000574997	OR5A1	Q8NGJ0	315 aa		4.07	□□□□□ -1.76
TRIM25-209	ENST00000574997	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.07	□□□□□ -1.76
TRIM25-209	ENST00000574997	ISOC2	Q96AB3	205 aa		4.07	□□□□□ -1.76
TRIM25-209	ENST00000574997	MED9	Q9NWA0	146 aa		4.07	□□□□□ -1.76
TRIM25-209	ENST00000574997	TRBV6-5	A0A0K0K1A5	114 aa		4.06	□□□□□ -1.76
TRIM25-209	ENST00000574997		A0A1B0GV50	99 aa		4.06	□□□□□ -1.76
TRIM25-209	ENST00000574997		I3L3M4	83 aa		4.06	□□□□□ -1.76
TRIM25-209	ENST00000574997	APCS	P02743	223 aa		4.06	□□□□□ -1.76
TRIM25-209	ENST00000574997	CHTF8	P0CG12	524 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms