RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 RNASE8Q8TDE3 154 aaKnown RBP17.06■□□□□ 0.32
NPLOC4-217ENST00000574897 INAFM1C9JVW0 142 aa17.06■□□□□ 0.32
NPLOC4-217ENST00000574897 H3BRM9 83 aa17.06■□□□□ 0.32
NPLOC4-217ENST00000574897 IL17DQ8TAD2 202 aa17.06■□□□□ 0.32
NPLOC4-217ENST00000574897 PHLDA1Q8WV24 401 aaPredicted RBP17.06■□□□□ 0.32
NPLOC4-217ENST00000574897 IGLV4-3A0A075B6K6 122 aa17.05■□□□□ 0.32
NPLOC4-217ENST00000574897 K7ERJ3 54 aa17.05■□□□□ 0.32
NPLOC4-217ENST00000574897 IGHV3-53P01767 116 aa17.05■□□□□ 0.32
NPLOC4-217ENST00000574897 TMEM170BQ5T4T1 132 aa17.05■□□□□ 0.32
NPLOC4-217ENST00000574897 CEND1Q8N111 149 aa17.04■□□□□ 0.32
NPLOC4-217ENST00000574897 FAM104AQ969W3 186 aa17.04■□□□□ 0.32
NPLOC4-217ENST00000574897 H3BUT2 72 aa17.04■□□□□ 0.32
NPLOC4-217ENST00000574897 Q6ZTI0 123 aa17.04■□□□□ 0.32
NPLOC4-217ENST00000574897 HIVEP1P15822 2718 aa17.04■□□□□ 0.32
NPLOC4-217ENST00000574897 RHODO00212 210 aa17.03■□□□□ 0.32
NPLOC4-217ENST00000574897 PLEKHB2Q96CS7 222 aa17.03■□□□□ 0.32
NPLOC4-217ENST00000574897 TENM1Q9UKZ4 2725 aa17.03■□□□□ 0.32
NPLOC4-217ENST00000574897 RNASE13Q5GAN3 156 aaKnown RBP17.03■□□□□ 0.32
NPLOC4-217ENST00000574897 ZNF479Q96JC4 524 aa17.03■□□□□ 0.32
NPLOC4-217ENST00000574897 C9orf118A6NHY6 69 aa17.02■□□□□ 0.32
NPLOC4-217ENST00000574897 ZNF815PA8K554 130 aa17.02■□□□□ 0.32
NPLOC4-217ENST00000574897 TSPEAR-AS2P59090 65 aa17.02■□□□□ 0.32
NPLOC4-217ENST00000574897 PAPPA-AS1Q5QFB9 102 aa17.01■□□□□ 0.31
NPLOC4-217ENST00000574897 HIST1H4GQ99525 98 aa17.01■□□□□ 0.31
NPLOC4-217ENST00000574897 TM2D2Q9BX73 214 aa17.01■□□□□ 0.31
NPLOC4-217ENST00000574897 NHP2Q9NX24 153 aaKnown RBP17.01■□□□□ 0.31
NPLOC4-217ENST00000574897 CHCHD7Q9BUK0 85 aa17.01■□□□□ 0.31
NPLOC4-217ENST00000574897 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17■□□□□ 0.31
NPLOC4-217ENST00000574897 IGKV2-29A2NJV5 120 aaPredicted RBP17■□□□□ 0.31
NPLOC4-217ENST00000574897 OR4C5Q8NGB2 326 aa17■□□□□ 0.31
NPLOC4-217ENST00000574897 TRBV7-3A0A075B6L6 115 aa17■□□□□ 0.31
NPLOC4-217ENST00000574897 A0A0J9YXV3 536 aa17■□□□□ 0.31
NPLOC4-217ENST00000574897 TMEM263Q8WUH6 116 aaKnown RBP17■□□□□ 0.31
NPLOC4-217ENST00000574897 SPATA3Q8NHX4 192 aa16.99■□□□□ 0.31
NPLOC4-217ENST00000574897 VCX2Q9H322 139 aa16.99■□□□□ 0.31
NPLOC4-217ENST00000574897 NOP10Q9NPE3 64 aaKnown RBP16.99■□□□□ 0.31
NPLOC4-217ENST00000574897 SMIM13P0DJ93 91 aa16.98■□□□□ 0.31
NPLOC4-217ENST00000574897 NFE4Q86UQ8 179 aa16.98■□□□□ 0.31
NPLOC4-217ENST00000574897 PF4P02776 101 aa16.97■□□□□ 0.31
NPLOC4-217ENST00000574897 HERVK_113P61574 105 aa16.97■□□□□ 0.31
NPLOC4-217ENST00000574897 NDUFA11Q86Y39 141 aa16.97■□□□□ 0.31
NPLOC4-217ENST00000574897 IGHV3-64A0A075B6Q5 118 aa16.96■□□□□ 0.31
NPLOC4-217ENST00000574897 CMC4P56277 68 aaPredicted RBP16.96■□□□□ 0.31
NPLOC4-217ENST00000574897 PLAC8L1A1L4L8 177 aa16.96■□□□□ 0.31
NPLOC4-217ENST00000574897 SCGB1D4Q6XE38 83 aa16.96■□□□□ 0.31
NPLOC4-217ENST00000574897 ZNF22P17026 224 aaPredicted RBP16.95■□□□□ 0.3
NPLOC4-217ENST00000574897 LINC00482Q8N8I6 264 aa16.95■□□□□ 0.3
NPLOC4-217ENST00000574897 CSNK1G2-AS1Q8NCQ2 148 aa16.95■□□□□ 0.3
NPLOC4-217ENST00000574897 TAL2Q16559 108 aa16.95■□□□□ 0.3
NPLOC4-217ENST00000574897 FAM110AQ9BQ89 295 aa16.95■□□□□ 0.3
NPLOC4-217ENST00000574897 PYGO1Q9Y3Y4 419 aa16.95■□□□□ 0.3
NPLOC4-217ENST00000574897 DNAJC30Q96LL9 226 aa16.94■□□□□ 0.3
NPLOC4-217ENST00000574897 UBE2D4Q9Y2X8 147 aa16.94■□□□□ 0.3
NPLOC4-217ENST00000574897 AMELXQ99217 191 aa16.93■□□□□ 0.3
NPLOC4-217ENST00000574897 TMEM223A0PJW6 202 aa16.93■□□□□ 0.3
NPLOC4-217ENST00000574897 COTL1Q14019 142 aa16.93■□□□□ 0.3
NPLOC4-217ENST00000574897 Q6ZUT4 128 aa16.92■□□□□ 0.3
NPLOC4-217ENST00000574897 A0A1W2PPM0 123 aa16.91■□□□□ 0.3
NPLOC4-217ENST00000574897 GAGE10A6NGK3 116 aa16.91■□□□□ 0.3
NPLOC4-217ENST00000574897 J3QQQ9 107 aa16.91■□□□□ 0.3
NPLOC4-217ENST00000574897 GAGE12BA1L429 117 aa16.91■□□□□ 0.3
NPLOC4-217ENST00000574897 GAGE7O76087 117 aa16.91■□□□□ 0.3
NPLOC4-217ENST00000574897 GAGE12FP0CL80 117 aa16.91■□□□□ 0.3
NPLOC4-217ENST00000574897 GAGE12GP0CL81 117 aa16.91■□□□□ 0.3
NPLOC4-217ENST00000574897 GAGE12IP0CL82 117 aa16.91■□□□□ 0.3
NPLOC4-217ENST00000574897 C12orf74Q32Q52 190 aa16.9■□□□□ 0.3
NPLOC4-217ENST00000574897 SLC25A29Q8N8R3 303 aa16.9■□□□□ 0.3
NPLOC4-217ENST00000574897 ATRQ13535 2644 aa16.9■□□□□ 0.3
NPLOC4-217ENST00000574897 A0A0J9YY99 117 aa16.89■□□□□ 0.3
NPLOC4-217ENST00000574897 NBEAL2Q6ZNJ1 2754 aa16.89■□□□□ 0.29
NPLOC4-217ENST00000574897 TRAV4A0A0B4J268 109 aa16.89■□□□□ 0.29
NPLOC4-217ENST00000574897 K7EQD1 137 aa16.89■□□□□ 0.29
NPLOC4-217ENST00000574897 SAMD5Q5TGI4 173 aa16.89■□□□□ 0.29
NPLOC4-217ENST00000574897 C16orf74Q96GX8 76 aa16.89■□□□□ 0.29
NPLOC4-217ENST00000574897 DAZ2Q13117 558 aaKnown RBP16.88■□□□□ 0.29
NPLOC4-217ENST00000574897 RRN3P1Q2M238 152 aa16.87■□□□□ 0.29
NPLOC4-217ENST00000574897 GAGE12JA6NER3 117 aa16.87■□□□□ 0.29
NPLOC4-217ENST00000574897 LGALS3P17931 250 aaKnown RBP16.87■□□□□ 0.29
NPLOC4-217ENST00000574897 GAGE4Q13068 117 aa16.87■□□□□ 0.29
NPLOC4-217ENST00000574897 GAGE5Q13069 117 aa16.87■□□□□ 0.29
NPLOC4-217ENST00000574897 SRSF9Q13242 221 aaKnown RBP eCLIP16.87■□□□□ 0.29
NPLOC4-217ENST00000574897 GAGE13Q4V321 117 aa16.87■□□□□ 0.29
NPLOC4-217ENST00000574897 C1QTNF4Q9BXJ3 329 aa16.87■□□□□ 0.29
NPLOC4-217ENST00000574897 SPANXA1Q9NS26 97 aa16.87■□□□□ 0.29
NPLOC4-217ENST00000574897 K7EP34 96 aa16.86■□□□□ 0.29
NPLOC4-217ENST00000574897 MRPS36P82909 103 aaKnown RBP16.86■□□□□ 0.29
NPLOC4-217ENST00000574897 LINC00694P0DN24 101 aa16.86■□□□□ 0.29
NPLOC4-217ENST00000574897 TEP1Q99973 2627 aaKnown RBP16.86■□□□□ 0.29
NPLOC4-217ENST00000574897 TRGV2A0A075B6R0 118 aa16.85■□□□□ 0.29
NPLOC4-217ENST00000574897 LEPROTO15243 131 aa16.85■□□□□ 0.29
NPLOC4-217ENST00000574897 NTM-AS1Q6ZSK4 140 aa16.85■□□□□ 0.29
NPLOC4-217ENST00000574897 SPCS1Q9Y6A9 102 aa16.85■□□□□ 0.29
NPLOC4-217ENST00000574897 TRAV8-3A0A0A6YYJ7 113 aa16.85■□□□□ 0.29
NPLOC4-217ENST00000574897 LOC100131303A0A0U1RQF7 123 aa16.85■□□□□ 0.29
NPLOC4-217ENST00000574897 RPL36AP83881 106 aaKnown RBP16.84■□□□□ 0.29
NPLOC4-217ENST00000574897 RPL36ALQ969Q0 106 aaKnown RBP16.84■□□□□ 0.29
NPLOC4-217ENST00000574897 IGLL5B9A064 214 aa16.84■□□□□ 0.29
NPLOC4-217ENST00000574897 FABP2P12104 132 aa16.82■□□□□ 0.28
NPLOC4-217ENST00000574897 GTF2H5Q6ZYL4 71 aa16.82■□□□□ 0.28
NPLOC4-217ENST00000574897 CRYBA4P53673 196 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms