RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 POLR2KP53803 58 aaKnown RBP16.82■□□□□ 0.28
ATPAF1-213ENST00000574428 IGLV2-18A0A075B6J9 118 aa16.8■□□□□ 0.28
ATPAF1-213ENST00000574428 A0A096LNJ9 63 aa16.8■□□□□ 0.28
ATPAF1-213ENST00000574428 TRAV10A0A0B4J240 114 aa16.8■□□□□ 0.28
ATPAF1-213ENST00000574428 IGHV3-38A0A0C4DH36 116 aa16.79■□□□□ 0.28
ATPAF1-213ENST00000574428 LINC01546A6NGU7 62 aa16.79■□□□□ 0.28
ATPAF1-213ENST00000574428 BTF3P20290 206 aaKnown RBP16.79■□□□□ 0.28
ATPAF1-213ENST00000574428 UBE2D3P61077 147 aa16.79■□□□□ 0.28
ATPAF1-213ENST00000574428 UBE2D2P62837 147 aa16.79■□□□□ 0.28
ATPAF1-213ENST00000574428 TEX43Q6ZNM6 134 aa16.79■□□□□ 0.28
ATPAF1-213ENST00000574428 Q8N8P6 123 aa16.79■□□□□ 0.28
ATPAF1-213ENST00000574428 PHLDA1Q8WV24 401 aaPredicted RBP16.79■□□□□ 0.28
ATPAF1-213ENST00000574428 NXT2Q9NPJ8 142 aaKnown RBP16.79■□□□□ 0.28
ATPAF1-213ENST00000574428 RPL32P62910 135 aaKnown RBP16.79■□□□□ 0.28
ATPAF1-213ENST00000574428 TRBV27A0A0K0K1C4 114 aa16.78■□□□□ 0.28
ATPAF1-213ENST00000574428 VCYO14598 125 aa16.78■□□□□ 0.28
ATPAF1-213ENST00000574428 LINC00694P0DN24 101 aa16.78■□□□□ 0.28
ATPAF1-213ENST00000574428 ZNF664Q8N3J9 261 aa16.78■□□□□ 0.28
ATPAF1-213ENST00000574428 TCAPO15273 167 aa16.77■□□□□ 0.28
ATPAF1-213ENST00000574428 PRO1933Q9H354 126 aa16.77■□□□□ 0.28
ATPAF1-213ENST00000574428 PKIAP61925 76 aa16.77■□□□□ 0.27
ATPAF1-213ENST00000574428 SPATA12Q7Z6I5 190 aa16.77■□□□□ 0.27
ATPAF1-213ENST00000574428 HSPB8Q9UJY1 196 aa16.77■□□□□ 0.27
ATPAF1-213ENST00000574428 I3L3M4 83 aa16.76■□□□□ 0.27
ATPAF1-213ENST00000574428 A0A096LPF7 62 aa16.75■□□□□ 0.27
ATPAF1-213ENST00000574428 KIR2DL4Q99706 377 aa16.74■□□□□ 0.27
ATPAF1-213ENST00000574428 SYS1-DBNDD2H3BUS1 97 aa16.74■□□□□ 0.27
ATPAF1-213ENST00000574428 TSHBP01222 138 aa16.74■□□□□ 0.27
ATPAF1-213ENST00000574428 HBDP02042 147 aa16.74■□□□□ 0.27
ATPAF1-213ENST00000574428 DAZ4Q86SG3 579 aaKnown RBP16.73■□□□□ 0.27
ATPAF1-213ENST00000574428 DAZ3Q9NR90 486 aaKnown RBP16.73■□□□□ 0.27
ATPAF1-213ENST00000574428 ICOSQ9Y6W8 199 aa16.73■□□□□ 0.27
ATPAF1-213ENST00000574428 TSTD3H0UI37 97 aa16.72■□□□□ 0.27
ATPAF1-213ENST00000574428 MAP1LC3CQ9BXW4 147 aa16.72■□□□□ 0.27
ATPAF1-213ENST00000574428 H3BNG1 76 aa16.72■□□□□ 0.27
ATPAF1-213ENST00000574428 FCER1GP30273 86 aa16.72■□□□□ 0.27
ATPAF1-213ENST00000574428 ATP6V0E2Q8NHE4 81 aa16.72■□□□□ 0.27
ATPAF1-213ENST00000574428 LINC00587B1AMM8 73 aa16.71■□□□□ 0.27
ATPAF1-213ENST00000574428 MRPL23Q16540 153 aaKnown RBP16.71■□□□□ 0.27
ATPAF1-213ENST00000574428 NUDT3O95989 172 aa16.7■□□□□ 0.26
ATPAF1-213ENST00000574428 LAGE3Q14657 143 aa16.7■□□□□ 0.26
ATPAF1-213ENST00000574428 VAMP8Q9BV40 100 aa16.7■□□□□ 0.26
ATPAF1-213ENST00000574428 COTL1Q14019 142 aa16.69■□□□□ 0.26
ATPAF1-213ENST00000574428 ATOH7Q8N100 152 aa16.69■□□□□ 0.26
ATPAF1-213ENST00000574428 PET117Q6UWS5 81 aa16.68■□□□□ 0.26
ATPAF1-213ENST00000574428 PAM16Q9Y3D7 125 aa16.68■□□□□ 0.26
ATPAF1-213ENST00000574428 TGP01266 2768 aa16.68■□□□□ 0.26
ATPAF1-213ENST00000574428 ORMDL2Q53FV1 153 aa16.67■□□□□ 0.26
ATPAF1-213ENST00000574428 NTM-AS1Q6ZSK4 140 aa16.67■□□□□ 0.26
ATPAF1-213ENST00000574428 IGLL5B9A064 214 aa16.66■□□□□ 0.26
ATPAF1-213ENST00000574428 H0Y8G0 127 aa16.66■□□□□ 0.26
ATPAF1-213ENST00000574428 K7EMI3 77 aa16.66■□□□□ 0.26
ATPAF1-213ENST00000574428 C20orf202A1L168 122 aa16.65■□□□□ 0.26
ATPAF1-213ENST00000574428 SH2D6Q7Z4S9 175 aa16.64■□□□□ 0.25
ATPAF1-213ENST00000574428 GTSF1LQ9H1H1 148 aa16.64■□□□□ 0.25
ATPAF1-213ENST00000574428 DDTP30046 118 aa16.64■□□□□ 0.25
ATPAF1-213ENST00000574428 LINC01545Q5VT33 79 aa16.64■□□□□ 0.25
ATPAF1-213ENST00000574428 IFI27L1Q96BM0 104 aa16.64■□□□□ 0.25
ATPAF1-213ENST00000574428 CHCHD7Q9BUK0 85 aa16.64■□□□□ 0.25
ATPAF1-213ENST00000574428 CEMP1Q6PRD7 247 aaPredicted RBP16.63■□□□□ 0.25
ATPAF1-213ENST00000574428 MAJINQ3KP22 176 aa16.62■□□□□ 0.25
ATPAF1-213ENST00000574428 TRBV6-8A0A0A6YYG3 113 aa16.61■□□□□ 0.25
ATPAF1-213ENST00000574428 SPATA45Q537H7 98 aa16.61■□□□□ 0.25
ATPAF1-213ENST00000574428 C15orf53Q8NAA6 179 aa16.61■□□□□ 0.25
ATPAF1-213ENST00000574428 RPL39P62891 51 aaKnown RBP16.61■□□□□ 0.25
ATPAF1-213ENST00000574428 DNAH7Q8WXX0 4024 aa16.6■□□□□ 0.25
ATPAF1-213ENST00000574428 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.6■□□□□ 0.25
ATPAF1-213ENST00000574428 IGKV2-29A2NJV5 120 aaPredicted RBP16.6■□□□□ 0.25
ATPAF1-213ENST00000574428 C2orf66Q6UXQ4 117 aa16.6■□□□□ 0.25
ATPAF1-213ENST00000574428 C20orf203Q8NBC4 194 aa16.6■□□□□ 0.25
ATPAF1-213ENST00000574428 PMCHL2Q9BQD1 86 aa16.6■□□□□ 0.25
ATPAF1-213ENST00000574428 TRBV25-1A0A075B6N4 114 aa16.59■□□□□ 0.25
ATPAF1-213ENST00000574428 TRAV9-2A0A087WT02 112 aa16.59■□□□□ 0.25
ATPAF1-213ENST00000574428 NUPR2A6NF83 97 aa16.59■□□□□ 0.25
ATPAF1-213ENST00000574428 TMEM97Q5BJF2 176 aa16.59■□□□□ 0.25
ATPAF1-213ENST00000574428 LYPD5Q6UWN5 251 aa16.59■□□□□ 0.25
ATPAF1-213ENST00000574428 TMEM243Q9BU79 118 aa16.58■□□□□ 0.24
ATPAF1-213ENST00000574428 CYSLTR1Q9Y271 337 aa16.58■□□□□ 0.24
ATPAF1-213ENST00000574428 TOMM6Q96B49 74 aa16.57■□□□□ 0.24
ATPAF1-213ENST00000574428 LGALS9CQ6DKI2 356 aa16.56■□□□□ 0.24
ATPAF1-213ENST00000574428 ZFAND6Q6FIF0 208 aa16.56■□□□□ 0.24
ATPAF1-213ENST00000574428 ESRGQ1W209 222 aa16.56■□□□□ 0.24
ATPAF1-213ENST00000574428 CHCHD5Q9BSY4 110 aa16.56■□□□□ 0.24
ATPAF1-213ENST00000574428 CSMD3Q7Z407 3707 aa16.55■□□□□ 0.24
ATPAF1-213ENST00000574428 KLK5Q9Y337 293 aaPredicted RBP16.55■□□□□ 0.24
ATPAF1-213ENST00000574428 ATP5LO75964 103 aa16.54■□□□□ 0.24
ATPAF1-213ENST00000574428 G0S2P27469 103 aa16.54■□□□□ 0.24
ATPAF1-213ENST00000574428 hDV102S1A0JD36 115 aa16.54■□□□□ 0.24
ATPAF1-213ENST00000574428 TIRAPP58753 221 aa16.54■□□□□ 0.24
ATPAF1-213ENST00000574428 LELP1Q5T871 98 aa16.54■□□□□ 0.24
ATPAF1-213ENST00000574428 WWC2-AS2Q96NR7 200 aa16.54■□□□□ 0.24
ATPAF1-213ENST00000574428 UBE2L6O14933 153 aa16.53■□□□□ 0.24
ATPAF1-213ENST00000574428 GAGE6Q13070 117 aa16.53■□□□□ 0.24
ATPAF1-213ENST00000574428 MUC7Q8TAX7 377 aa16.53■□□□□ 0.24
ATPAF1-213ENST00000574428 APLNQ9ULZ1 77 aa16.53■□□□□ 0.24
ATPAF1-213ENST00000574428 DYNC2H1Q8NCM8 4307 aaKnown RBP16.52■□□□□ 0.24
ATPAF1-213ENST00000574428 SCGB3A1Q96QR1 104 aa16.52■□□□□ 0.24
ATPAF1-213ENST00000574428 MIEN1Q9BRT3 115 aa16.52■□□□□ 0.24
ATPAF1-213ENST00000574428 UBE2D4Q9Y2X8 147 aa16.51■□□□□ 0.23
ATPAF1-213ENST00000574428 PRSS1P07477 247 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms