RNA–Protein interactions for RNA: ENST00000574294.5

TVP23B-207, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 1,049 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-207ENST00000574294 INAFM2P0DMQ5 153 aa10.81□□□□□ -0.68
TVP23B-207ENST00000574294 GFRA4Q9GZZ7 299 aa10.81□□□□□ -0.68
TVP23B-207ENST00000574294 SRRM2Q9UQ35 2752 aaKnown RBP10.81□□□□□ -0.68
TVP23B-207ENST00000574294 ZNF727A8MUV8 499 aa10.8□□□□□ -0.68
TVP23B-207ENST00000574294 NCR2O95944 276 aa10.8□□□□□ -0.68
TVP23B-207ENST00000574294 AMTP48728 403 aa10.8□□□□□ -0.68
TVP23B-207ENST00000574294 REG3AQ06141 175 aa10.8□□□□□ -0.68
TVP23B-207ENST00000574294 LINC01551Q86U37 167 aa10.8□□□□□ -0.68
TVP23B-207ENST00000574294 GATD1Q8NB37 220 aa10.8□□□□□ -0.68
TVP23B-207ENST00000574294 FAM30AQ9NZY2 134 aa10.8□□□□□ -0.68
TVP23B-207ENST00000574294 HLA-DQA1P01909 254 aa10.79□□□□□ -0.68
TVP23B-207ENST00000574294 FAM74A3Q4VXF1 159 aa10.79□□□□□ -0.68
TVP23B-207ENST00000574294 DGAT2L7PQ6IED9 249 aa10.79□□□□□ -0.68
TVP23B-207ENST00000574294 CLRN3Q8NCR9 226 aa10.79□□□□□ -0.68
TVP23B-207ENST00000574294 TSKUQ8WUA8 353 aa10.79□□□□□ -0.68
TVP23B-207ENST00000574294 OSTCQ9NRP0 149 aa10.79□□□□□ -0.68
TVP23B-207ENST00000574294 USP17L23D6RBM5 183 aa10.78□□□□□ -0.68
TVP23B-207ENST00000574294 A0A1B0GUT8 65 aa10.77□□□□□ -0.69
TVP23B-207ENST00000574294 H7C423 109 aa10.77□□□□□ -0.69
TVP23B-207ENST00000574294 SRP19P09132 144 aaKnown RBP10.77□□□□□ -0.69
TVP23B-207ENST00000574294 C20orf203Q8NBC4 194 aa10.77□□□□□ -0.69
TVP23B-207ENST00000574294 PLA2G1BP04054 148 aaKnown RBP10.76□□□□□ -0.69
TVP23B-207ENST00000574294 CLPSL2Q6UWE3 100 aa10.76□□□□□ -0.69
TVP23B-207ENST00000574294 CHAC1Q9BUX1 264 aa10.76□□□□□ -0.69
TVP23B-207ENST00000574294 SMDT1Q9H4I9 107 aa10.76□□□□□ -0.69
TVP23B-207ENST00000574294 TRAV26-2A0A0B4J265 109 aa10.75□□□□□ -0.69
TVP23B-207ENST00000574294 TRBV6-5A0A0K0K1A5 114 aa10.75□□□□□ -0.69
TVP23B-207ENST00000574294 HIGD1CA8MV81 97 aa10.75□□□□□ -0.69
TVP23B-207ENST00000574294 SMCPP49901 116 aaPredicted RBP10.75□□□□□ -0.69
TVP23B-207ENST00000574294 HAMPP81172 84 aa10.75□□□□□ -0.69
TVP23B-207ENST00000574294 TMEM241Q24JQ0 296 aa10.75□□□□□ -0.69
TVP23B-207ENST00000574294 KRTAP26-1Q6PEX3 210 aa10.75□□□□□ -0.69
TVP23B-207ENST00000574294 TMEM191AQ9H0A3 160 aa10.75□□□□□ -0.69
TVP23B-207ENST00000574294 DMBT1Q9UGM3 2413 aaPredicted RBP10.75□□□□□ -0.69
TVP23B-207ENST00000574294 IGLV4-60A0A075B6I1 120 aa10.74□□□□□ -0.69
TVP23B-207ENST00000574294 A0A1B0GVG6 124 aa10.74□□□□□ -0.69
TVP23B-207ENST00000574294 SDHAF1A6NFY7 115 aa10.74□□□□□ -0.69
TVP23B-207ENST00000574294 I3L3M4 83 aa10.73□□□□□ -0.69
TVP23B-207ENST00000574294 APCSP02743 223 aa10.73□□□□□ -0.69
TVP23B-207ENST00000574294 PRSS1P07477 247 aa10.73□□□□□ -0.69
TVP23B-207ENST00000574294 LINC01620Q4KN68 170 aa10.73□□□□□ -0.69
TVP23B-207ENST00000574294 AMMECR1LQ6DCA0 310 aa10.73□□□□□ -0.69
TVP23B-207ENST00000574294 RPL39LQ96EH5 51 aaKnown RBP10.73□□□□□ -0.69
TVP23B-207ENST00000574294 PPP1R17O96001 155 aa10.72□□□□□ -0.69
TVP23B-207ENST00000574294 ZNF25P17030 456 aaPredicted RBP10.72□□□□□ -0.69
TVP23B-207ENST00000574294 RIGQ13278 110 aa10.72□□□□□ -0.69
TVP23B-207ENST00000574294 PEA15Q15121 130 aa10.72□□□□□ -0.69
TVP23B-207ENST00000574294 SCXQ7RTU7 201 aa10.72□□□□□ -0.69
TVP23B-207ENST00000574294 C9orf163Q8N9P6 203 aa10.72□□□□□ -0.69
TVP23B-207ENST00000574294 MRAP2Q96G30 205 aa10.72□□□□□ -0.69
TVP23B-207ENST00000574294 IGLV10-54A0A075B6I4 117 aa10.71□□□□□ -0.69
TVP23B-207ENST00000574294 PMCHP20382 165 aa10.71□□□□□ -0.69
TVP23B-207ENST00000574294 LCE2CQ5TA81 110 aa10.71□□□□□ -0.69
TVP23B-207ENST00000574294 LINC00528Q8N1L1 170 aa10.71□□□□□ -0.69
TVP23B-207ENST00000574294 ISOC2Q96AB3 205 aa10.71□□□□□ -0.69
TVP23B-207ENST00000574294 ST20Q9HBF5 79 aa10.71□□□□□ -0.69
TVP23B-207ENST00000574294 NAT8Q9UHE5 227 aa10.71□□□□□ -0.69
TVP23B-207ENST00000574294 FAT1Q14517 4588 aa10.7□□□□□ -0.7
TVP23B-207ENST00000574294 CFAP161Q6P656 301 aa10.7□□□□□ -0.7
TVP23B-207ENST00000574294 BTF3L4Q96K17 158 aa10.7□□□□□ -0.7
TVP23B-207ENST00000574294 AP5S1Q9NUS5 200 aa10.7□□□□□ -0.7
TVP23B-207ENST00000574294 NAT8BQ9UHF3 227 aa10.7□□□□□ -0.7
TVP23B-207ENST00000574294 V9GYV3 84 aa10.7□□□□□ -0.7
TVP23B-207ENST00000574294 FLG2Q5D862 2391 aaPredicted RBP10.7□□□□□ -0.7
TVP23B-207ENST00000574294 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.69□□□□□ -0.7
TVP23B-207ENST00000574294 CNBPP62633 177 aaKnown RBP10.69□□□□□ -0.7
TVP23B-207ENST00000574294 A0A1B0GW15 77 aa10.68□□□□□ -0.7
TVP23B-207ENST00000574294 hDV102S1A0JD36 115 aa10.68□□□□□ -0.7
TVP23B-207ENST00000574294 FGF6P10767 208 aa10.68□□□□□ -0.7
TVP23B-207ENST00000574294 RAB4AP20338 218 aa10.68□□□□□ -0.7
TVP23B-207ENST00000574294 RPL23P62829 140 aaKnown RBP10.68□□□□□ -0.7
TVP23B-207ENST00000574294 RNASEKQ6P5S7 137 aaKnown RBP10.68□□□□□ -0.7
TVP23B-207ENST00000574294 NUP35Q8NFH5 326 aa10.68□□□□□ -0.7
TVP23B-207ENST00000574294 CIRBP-AS1Q8TBR5 109 aa10.68□□□□□ -0.7
TVP23B-207ENST00000574294 DEFB104AQ8WTQ1 72 aa10.68□□□□□ -0.7
TVP23B-207ENST00000574294 TMEM101Q96IK0 257 aa10.68□□□□□ -0.7
TVP23B-207ENST00000574294 VPS13BQ7Z7G8 4022 aa10.68□□□□□ -0.7
TVP23B-207ENST00000574294 TRBV27A0A0K0K1C4 114 aa10.67□□□□□ -0.7
TVP23B-207ENST00000574294 SMAGPQ0VAQ4 97 aa10.67□□□□□ -0.7
TVP23B-207ENST00000574294 ADIRFQ15847 76 aa10.67□□□□□ -0.7
TVP23B-207ENST00000574294 ESDP10768 282 aa10.66□□□□□ -0.7
TVP23B-207ENST00000574294 POLR2KP53803 58 aaKnown RBP10.66□□□□□ -0.7
TVP23B-207ENST00000574294 RNF185Q96GF1 192 aa10.66□□□□□ -0.7
TVP23B-207ENST00000574294 DNAH8Q96JB1 4490 aa10.65□□□□□ -0.7
TVP23B-207ENST00000574294 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.65□□□□□ -0.7
TVP23B-207ENST00000574294 IGKV2-29A2NJV5 120 aaPredicted RBP10.65□□□□□ -0.7
TVP23B-207ENST00000574294 VCYO14598 125 aa10.65□□□□□ -0.7
TVP23B-207ENST00000574294 PPP1R2P9O14990 202 aa10.65□□□□□ -0.7
TVP23B-207ENST00000574294 AMN1Q8IY45 258 aa10.65□□□□□ -0.7
TVP23B-207ENST00000574294 OR5A1Q8NGJ0 315 aa10.65□□□□□ -0.7
TVP23B-207ENST00000574294 SMIM27A0A1W2PRY6 76 aa10.64□□□□□ -0.71
TVP23B-207ENST00000574294 LINC00862A6NCI5 91 aa10.64□□□□□ -0.71
TVP23B-207ENST00000574294 GAGE12HA6NDE8 117 aa10.64□□□□□ -0.71
TVP23B-207ENST00000574294 J3QL48 77 aa10.64□□□□□ -0.71
TVP23B-207ENST00000574294 TSHBP01222 138 aa10.64□□□□□ -0.71
TVP23B-207ENST00000574294 S100A8P05109 93 aa10.64□□□□□ -0.71
TVP23B-207ENST00000574294 SDIM1Q6ZPB5 146 aa10.64□□□□□ -0.71
TVP23B-207ENST00000574294 MRPL52Q86TS9 123 aaKnown RBP10.64□□□□□ -0.71
TVP23B-207ENST00000574294 IGHV3-64A0A075B6Q5 118 aa10.63□□□□□ -0.71
TVP23B-207ENST00000574294 IGKV3OR2-268A0A0C4DH90 116 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms