RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 A6NJY4 79 aa12.01□□□□□ -0.49
RAB40B-206ENST00000571995 I3L3M4 83 aa12.01□□□□□ -0.49
RAB40B-206ENST00000571995 SOCS3O14543 225 aa12□□□□□ -0.49
RAB40B-206ENST00000571995 MAP6D1Q9H9H5 199 aa12□□□□□ -0.49
RAB40B-206ENST00000571995 C12orf74Q32Q52 190 aa12□□□□□ -0.49
RAB40B-206ENST00000571995 H3BMM0 161 aa11.99□□□□□ -0.49
RAB40B-206ENST00000571995 GAGE6Q13070 117 aa11.99□□□□□ -0.49
RAB40B-206ENST00000571995 Q6ZTI0 123 aa11.99□□□□□ -0.49
RAB40B-206ENST00000571995 CNFNQ9BYD5 112 aa11.99□□□□□ -0.49
RAB40B-206ENST00000571995 TOMM6Q96B49 74 aa11.98□□□□□ -0.49
RAB40B-206ENST00000571995 ZNF580Q9UK33 172 aa11.98□□□□□ -0.49
RAB40B-206ENST00000571995 A0A0J9YY99 117 aa11.98□□□□□ -0.49
RAB40B-206ENST00000571995 WFDC2Q14508 124 aa11.98□□□□□ -0.49
RAB40B-206ENST00000571995 J3QQQ9 107 aa11.97□□□□□ -0.49
RAB40B-206ENST00000571995 TIMM21Q9BVV7 248 aa11.97□□□□□ -0.49
RAB40B-206ENST00000571995 RPL36AP83881 106 aaKnown RBP11.97□□□□□ -0.49
RAB40B-206ENST00000571995 ZNF575Q86XF7 245 aa11.97□□□□□ -0.49
RAB40B-206ENST00000571995 RPL36ALQ969Q0 106 aaKnown RBP11.97□□□□□ -0.49
RAB40B-206ENST00000571995 GTSF1LQ9H1H1 148 aa11.97□□□□□ -0.49
RAB40B-206ENST00000571995 M0R2P5 195 aa11.96□□□□□ -0.49
RAB40B-206ENST00000571995 PAPPA-AS1Q5QFB9 102 aa11.96□□□□□ -0.49
RAB40B-206ENST00000571995 KLLNB2CW77 178 aa11.96□□□□□ -0.5
RAB40B-206ENST00000571995 DEFB114Q30KQ6 69 aa11.96□□□□□ -0.5
RAB40B-206ENST00000571995 ZFHX3Q15911 3703 aa11.96□□□□□ -0.5
RAB40B-206ENST00000571995 K7EP34 96 aa11.95□□□□□ -0.5
RAB40B-206ENST00000571995 RNASE1P07998 156 aaKnown RBP11.95□□□□□ -0.5
RAB40B-206ENST00000571995 HIVEP1P15822 2718 aa11.95□□□□□ -0.5
RAB40B-206ENST00000571995 IGLV2-18A0A075B6J9 118 aa11.95□□□□□ -0.5
RAB40B-206ENST00000571995 SMAGPQ0VAQ4 97 aa11.95□□□□□ -0.5
RAB40B-206ENST00000571995 J3QR89 54 aa11.95□□□□□ -0.5
RAB40B-206ENST00000571995 LINC00482Q8N8I6 264 aa11.95□□□□□ -0.5
RAB40B-206ENST00000571995 INAFM1C9JVW0 142 aa11.94□□□□□ -0.5
RAB40B-206ENST00000571995 OR13C6PQ8NH95 151 aa11.94□□□□□ -0.5
RAB40B-206ENST00000571995 TEX48A0A1B0GUV7 120 aa11.94□□□□□ -0.5
RAB40B-206ENST00000571995 CRYGDP07320 174 aa11.94□□□□□ -0.5
RAB40B-206ENST00000571995 NEXN-AS1Q8NBZ9 246 aa11.94□□□□□ -0.5
RAB40B-206ENST00000571995 M0QY20 66 aa11.93□□□□□ -0.5
RAB40B-206ENST00000571995 RBMY1A1P0DJD3 496 aaKnown RBP11.93□□□□□ -0.5
RAB40B-206ENST00000571995 RBMY1CP0DJD4 496 aa11.93□□□□□ -0.5
RAB40B-206ENST00000571995 RBMY1FQ15415 496 aaKnown RBP11.93□□□□□ -0.5
RAB40B-206ENST00000571995 PTH2Q96A98 100 aa11.93□□□□□ -0.5
RAB40B-206ENST00000571995 NDUFA7O95182 113 aa11.93□□□□□ -0.5
RAB40B-206ENST00000571995 A8MWV9 139 aa11.92□□□□□ -0.5
RAB40B-206ENST00000571995 IGLL5B9A064 214 aa11.92□□□□□ -0.5
RAB40B-206ENST00000571995 COX8CQ7Z4L0 72 aa11.92□□□□□ -0.5
RAB40B-206ENST00000571995 LINC01006Q8NI28 216 aa11.92□□□□□ -0.5
RAB40B-206ENST00000571995 TMEM101Q96IK0 257 aa11.91□□□□□ -0.5
RAB40B-206ENST00000571995 PSMG3-AS1Q96PY0 264 aa11.91□□□□□ -0.5
RAB40B-206ENST00000571995 TSSC4Q9Y5U2 329 aaPredicted RBP11.91□□□□□ -0.5
RAB40B-206ENST00000571995 OR5A1Q8NGJ0 315 aa11.91□□□□□ -0.5
RAB40B-206ENST00000571995 NDUFA12Q9UI09 145 aa11.91□□□□□ -0.5
RAB40B-206ENST00000571995 PFN2P35080 140 aa11.9□□□□□ -0.5
RAB40B-206ENST00000571995 Q6ZSN1 163 aa11.9□□□□□ -0.5
RAB40B-206ENST00000571995 TMEM141Q96I45 108 aa11.9□□□□□ -0.5
RAB40B-206ENST00000571995 PRIMA1Q86XR5 153 aa11.9□□□□□ -0.5
RAB40B-206ENST00000571995 LOC100131303A0A0U1RQF7 123 aa11.9□□□□□ -0.5
RAB40B-206ENST00000571995 C4orf3Q8WVX3 66 aa11.9□□□□□ -0.5
RAB40B-206ENST00000571995 Q6ZUT4 128 aa11.89□□□□□ -0.51
RAB40B-206ENST00000571995 IGLV10-54A0A075B6I4 117 aa11.89□□□□□ -0.51
RAB40B-206ENST00000571995 CRIP2P52943 208 aaPredicted RBP11.89□□□□□ -0.51
RAB40B-206ENST00000571995 RBMY1BA6NDE4 496 aaKnown RBP11.88□□□□□ -0.51
RAB40B-206ENST00000571995 RBMY1EA6NEQ0 496 aaKnown RBP11.88□□□□□ -0.51
RAB40B-206ENST00000571995 RBMY1DP0C7P1 496 aaKnown RBP11.88□□□□□ -0.51
RAB40B-206ENST00000571995 DEFB135Q30KP9 77 aa11.88□□□□□ -0.51
RAB40B-206ENST00000571995 C20orf203Q8NBC4 194 aa11.88□□□□□ -0.51
RAB40B-206ENST00000571995 A4D1N5 150 aa11.88□□□□□ -0.51
RAB40B-206ENST00000571995 C5orf38Q86SI9 138 aa11.88□□□□□ -0.51
RAB40B-206ENST00000571995 TEX29Q8N6K0 151 aa11.88□□□□□ -0.51
RAB40B-206ENST00000571995 SIVA1O15304 175 aa11.88□□□□□ -0.51
RAB40B-206ENST00000571995 LINC00467Q9BRT7 94 aa11.88□□□□□ -0.51
RAB40B-206ENST00000571995 NBPF19A0A087WUL8 3843 aa11.88□□□□□ -0.51
RAB40B-206ENST00000571995 E9PLD3 99 aa11.87□□□□□ -0.51
RAB40B-206ENST00000571995 ODF3L2Q3SX64 289 aa11.87□□□□□ -0.51
RAB40B-206ENST00000571995 ERG28Q9UKR5 140 aa11.87□□□□□ -0.51
RAB40B-206ENST00000571995 POLR2KP53803 58 aaKnown RBP11.87□□□□□ -0.51
RAB40B-206ENST00000571995 CIRBPQ14011 172 aaKnown RBP11.87□□□□□ -0.51
RAB40B-206ENST00000571995 LINC00158P58513 81 aa11.87□□□□□ -0.51
RAB40B-206ENST00000571995 TSPEAR-AS2P59090 65 aa11.87□□□□□ -0.51
RAB40B-206ENST00000571995 C9JAW5 83 aa11.86□□□□□ -0.51
RAB40B-206ENST00000571995 NSD1Q96L73 2696 aaPredicted RBP11.86□□□□□ -0.51
RAB40B-206ENST00000571995 IGHV4-4A0A075B6R2 117 aa11.86□□□□□ -0.51
RAB40B-206ENST00000571995 MUSTN1Q8IVN3 82 aa11.86□□□□□ -0.51
RAB40B-206ENST00000571995 CRLF1O75462 422 aa11.86□□□□□ -0.51
RAB40B-206ENST00000571995 NXPH4O95158 308 aa11.86□□□□□ -0.51
RAB40B-206ENST00000571995 TSHBP01222 138 aa11.85□□□□□ -0.51
RAB40B-206ENST00000571995 TRAV12-1A0A0B4J245 112 aa11.84□□□□□ -0.51
RAB40B-206ENST00000571995 F5H768 121 aa11.84□□□□□ -0.51
RAB40B-206ENST00000571995 LINC00315P59091 139 aa11.84□□□□□ -0.51
RAB40B-206ENST00000571995 IGLV4-3A0A075B6K6 122 aa11.84□□□□□ -0.51
RAB40B-206ENST00000571995 XCL1P47992 114 aa11.84□□□□□ -0.51
RAB40B-206ENST00000571995 CFAP126Q5VTH2 177 aa11.83□□□□□ -0.52
RAB40B-206ENST00000571995 Q9H8V8 135 aa11.83□□□□□ -0.52
RAB40B-206ENST00000571995 RHODO00212 210 aa11.83□□□□□ -0.52
RAB40B-206ENST00000571995 LYRM7Q5U5X0 104 aa11.83□□□□□ -0.52
RAB40B-206ENST00000571995 C9orf85Q96MD7 179 aa11.83□□□□□ -0.52
RAB40B-206ENST00000571995 TENM4Q6N022 2769 aa11.83□□□□□ -0.52
RAB40B-206ENST00000571995 CDKN2A-AS1Q9UH64 79 aa11.82□□□□□ -0.52
RAB40B-206ENST00000571995 KIF25-AS1Q9Y6Z4 181 aa11.82□□□□□ -0.52
RAB40B-206ENST00000571995 TMEM238C9JI98 176 aa11.82□□□□□ -0.52
RAB40B-206ENST00000571995 COX6CP09669 75 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms