RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 NUDT3O95989 172 aa8.32□□□□□ -1.08
CDRT1-206ENST00000571263 TSHBP01222 138 aa8.32□□□□□ -1.08
CDRT1-206ENST00000571263 HBDP02042 147 aa8.32□□□□□ -1.08
CDRT1-206ENST00000571263 SNRPEP62304 92 aaKnown RBP8.32□□□□□ -1.08
CDRT1-206ENST00000571263 Q9UF83 564 aa8.32□□□□□ -1.08
CDRT1-206ENST00000571263 KLK5Q9Y337 293 aaPredicted RBP8.32□□□□□ -1.08
CDRT1-206ENST00000571263 TRBV25-1A0A075B6N4 114 aa8.31□□□□□ -1.08
CDRT1-206ENST00000571263 IGHV1-24A0A0C4DH33 117 aa8.31□□□□□ -1.08
CDRT1-206ENST00000571263 PKIAP61925 76 aa8.31□□□□□ -1.08
CDRT1-206ENST00000571263 A0A096LPF7 62 aa8.3□□□□□ -1.08
CDRT1-206ENST00000571263 TRBV6-8A0A0A6YYG3 113 aa8.3□□□□□ -1.08
CDRT1-206ENST00000571263 NPSP0C0P6 89 aa8.3□□□□□ -1.08
CDRT1-206ENST00000571263 AMTP48728 403 aa8.3□□□□□ -1.08
CDRT1-206ENST00000571263 CEMP1Q6PRD7 247 aaPredicted RBP8.3□□□□□ -1.08
CDRT1-206ENST00000571263 C20orf203Q8NBC4 194 aa8.3□□□□□ -1.08
CDRT1-206ENST00000571263 HSPB8Q9UJY1 196 aa8.3□□□□□ -1.08
CDRT1-206ENST00000571263 CYSLTR1Q9Y271 337 aa8.3□□□□□ -1.08
CDRT1-206ENST00000571263 IGHV3-38A0A0C4DH36 116 aa8.29□□□□□ -1.08
CDRT1-206ENST00000571263 NUPR1O60356 82 aa8.29□□□□□ -1.08
CDRT1-206ENST00000571263 LEPROTL1O95214 131 aa8.29□□□□□ -1.08
CDRT1-206ENST00000571263 BTF3P20290 206 aaKnown RBP8.29□□□□□ -1.08
CDRT1-206ENST00000571263 LINC00310P59036 64 aa8.29□□□□□ -1.08
CDRT1-206ENST00000571263 HIST3H2BBQ8N257 126 aa8.29□□□□□ -1.08
CDRT1-206ENST00000571263 TOMM6Q96B49 74 aa8.29□□□□□ -1.08
CDRT1-206ENST00000571263 TMEM243Q9BU79 118 aa8.29□□□□□ -1.08
CDRT1-206ENST00000571263 IGLL5B9A064 214 aa8.28□□□□□ -1.08
CDRT1-206ENST00000571263 UBE2L6O14933 153 aa8.28□□□□□ -1.08
CDRT1-206ENST00000571263 ATP5LO75964 103 aa8.28□□□□□ -1.08
CDRT1-206ENST00000571263 PAPPA-AS1Q5QFB9 102 aa8.28□□□□□ -1.08
CDRT1-206ENST00000571263 LELP1Q5T871 98 aa8.28□□□□□ -1.08
CDRT1-206ENST00000571263 C2orf66Q6UXQ4 117 aa8.28□□□□□ -1.08
CDRT1-206ENST00000571263 TIMM21Q9BVV7 248 aa8.28□□□□□ -1.08
CDRT1-206ENST00000571263 NBEAL2Q6ZNJ1 2754 aa8.27□□□□□ -1.09
CDRT1-206ENST00000571263 TRAV8-6A0A0B4J262 113 aa8.27□□□□□ -1.09
CDRT1-206ENST00000571263 LYPD5Q6UWN5 251 aa8.27□□□□□ -1.09
CDRT1-206ENST00000571263 NTM-AS1Q6ZSK4 140 aa8.27□□□□□ -1.09
CDRT1-206ENST00000571263 ERASQ7Z444 233 aa8.27□□□□□ -1.09
CDRT1-206ENST00000571263 FAM19A2Q8N3H0 131 aa8.27□□□□□ -1.09
CDRT1-206ENST00000571263 TMEM141Q96I45 108 aa8.27□□□□□ -1.09
CDRT1-206ENST00000571263 WWC2-AS2Q96NR7 200 aa8.27□□□□□ -1.09
CDRT1-206ENST00000571263 CHCHD7Q9BUK0 85 aa8.27□□□□□ -1.09
CDRT1-206ENST00000571263 SPANXA1Q9NS26 97 aa8.27□□□□□ -1.09
CDRT1-206ENST00000571263 PYGO1Q9Y3Y4 419 aa8.27□□□□□ -1.09
CDRT1-206ENST00000571263 CSDC2Q9Y534 153 aaKnown RBP8.27□□□□□ -1.09
CDRT1-206ENST00000571263 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.26□□□□□ -1.09
CDRT1-206ENST00000571263 ZNF25P17030 456 aaPredicted RBP8.26□□□□□ -1.09
CDRT1-206ENST00000571263 CCL18P55774 89 aa8.26□□□□□ -1.09
CDRT1-206ENST00000571263 PDZD11Q5EBL8 140 aa8.26□□□□□ -1.09
CDRT1-206ENST00000571263 SCGB3A1Q96QR1 104 aa8.26□□□□□ -1.09
CDRT1-206ENST00000571263 TIMM17AQ99595 171 aa8.26□□□□□ -1.09
CDRT1-206ENST00000571263 A0A096LNJ9 63 aa8.25□□□□□ -1.09
CDRT1-206ENST00000571263 DGAT2L7PQ6IED9 249 aa8.25□□□□□ -1.09
CDRT1-206ENST00000571263 MRPL52Q86TS9 123 aaKnown RBP8.25□□□□□ -1.09
CDRT1-206ENST00000571263 TMEM101Q96IK0 257 aa8.25□□□□□ -1.09
CDRT1-206ENST00000571263 HIST1H2BLQ99880 126 aa8.25□□□□□ -1.09
CDRT1-206ENST00000571263 CHCHD5Q9BSY4 110 aa8.25□□□□□ -1.09
CDRT1-206ENST00000571263 MAP1LC3CQ9BXW4 147 aa8.25□□□□□ -1.09
CDRT1-206ENST00000571263 A0A1B0GUV1 79 aa8.24□□□□□ -1.09
CDRT1-206ENST00000571263 FABP4P15090 132 aa8.24□□□□□ -1.09
CDRT1-206ENST00000571263 AKR1D1P51857 326 aa8.24□□□□□ -1.09
CDRT1-206ENST00000571263 PMCHL1Q16048 86 aa8.24□□□□□ -1.09
CDRT1-206ENST00000571263 AMMECR1LQ6DCA0 310 aa8.24□□□□□ -1.09
CDRT1-206ENST00000571263 IGIPA6NJ69 53 aa8.23□□□□□ -1.09
CDRT1-206ENST00000571263 MRPS36P82909 103 aaKnown RBP8.23□□□□□ -1.09
CDRT1-206ENST00000571263 ESRGQ1W209 222 aa8.23□□□□□ -1.09
CDRT1-206ENST00000571263 Q6ZN92 141 aa8.23□□□□□ -1.09
CDRT1-206ENST00000571263 MUC7Q8TAX7 377 aa8.23□□□□□ -1.09
CDRT1-206ENST00000571263 IFI27L1Q96BM0 104 aa8.23□□□□□ -1.09
CDRT1-206ENST00000571263 APLNQ9ULZ1 77 aa8.23□□□□□ -1.09
CDRT1-206ENST00000571263 UBE2D4Q9Y2X8 147 aa8.23□□□□□ -1.09
CDRT1-206ENST00000571263 HUWE1Q7Z6Z7 4374 aaKnown RBP8.23□□□□□ -1.09
CDRT1-206ENST00000571263 DNAH9Q9NYC9 4486 aa8.22□□□□□ -1.09
CDRT1-206ENST00000571263 LOC105371267A0A1B0GV96 52 aa8.22□□□□□ -1.09
CDRT1-206ENST00000571263 TMEM262E9PQX1 116 aa8.22□□□□□ -1.09
CDRT1-206ENST00000571263 FGF6P10767 208 aa8.22□□□□□ -1.09
CDRT1-206ENST00000571263 OR5A1Q8NGJ0 315 aa8.22□□□□□ -1.09
CDRT1-206ENST00000571263 DEFB104AQ8WTQ1 72 aa8.22□□□□□ -1.09
CDRT1-206ENST00000571263 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.21□□□□□ -1.1
CDRT1-206ENST00000571263 A0A087WX48 190 aa8.21□□□□□ -1.1
CDRT1-206ENST00000571263 IGKV2-29A2NJV5 120 aaPredicted RBP8.21□□□□□ -1.1
CDRT1-206ENST00000571263 PRSS1P07477 247 aa8.21□□□□□ -1.1
CDRT1-206ENST00000571263 RPL39P62891 51 aaKnown RBP8.21□□□□□ -1.1
CDRT1-206ENST00000571263 CTAG1AP78358 180 aa8.21□□□□□ -1.1
CDRT1-206ENST00000571263 PET117Q6UWS5 81 aa8.21□□□□□ -1.1
CDRT1-206ENST00000571263 SPATA12Q7Z6I5 190 aa8.21□□□□□ -1.1
CDRT1-206ENST00000571263 MRPS16Q9Y3D3 137 aaKnown RBP8.21□□□□□ -1.1
CDRT1-206ENST00000571263 C20orf202A1L168 122 aa8.2□□□□□ -1.1
CDRT1-206ENST00000571263 C3orf84H3BNL1 204 aa8.2□□□□□ -1.1
CDRT1-206ENST00000571263 K7EP13 123 aa8.2□□□□□ -1.1
CDRT1-206ENST00000571263 UPK3BQ9BT76 320 aa8.2□□□□□ -1.1
CDRT1-206ENST00000571263 VCX2Q9H322 139 aa8.2□□□□□ -1.1
CDRT1-206ENST00000571263 TRAV12-1A0A0B4J245 112 aa8.19□□□□□ -1.1
CDRT1-206ENST00000571263 IFITM10A6NMD0 228 aa8.19□□□□□ -1.1
CDRT1-206ENST00000571263 SYS1-DBNDD2H3BUS1 97 aa8.19□□□□□ -1.1
CDRT1-206ENST00000571263 CCL25O15444 150 aa8.19□□□□□ -1.1
CDRT1-206ENST00000571263 GAGE6Q13070 117 aa8.19□□□□□ -1.1
CDRT1-206ENST00000571263 PMVKQ15126 192 aa8.19□□□□□ -1.1
CDRT1-206ENST00000571263 TEX43Q6ZNM6 134 aa8.19□□□□□ -1.1
CDRT1-206ENST00000571263 ZNF664Q8N3J9 261 aa8.19□□□□□ -1.1
CDRT1-206ENST00000571263 OR10D4PQ8NGN7 298 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms