RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 PRSS29PA6NIE9 313 aa12.41□□□□□ -0.42
RPAIN-208ENST00000571043 CIDEAO60543 219 aa12.41□□□□□ -0.42
RPAIN-208ENST00000571043 C20orf203Q8NBC4 194 aa12.41□□□□□ -0.42
RPAIN-208ENST00000571043 NOP10Q9NPE3 64 aaKnown RBP12.41□□□□□ -0.42
RPAIN-208ENST00000571043 FGF6P10767 208 aa12.4□□□□□ -0.42
RPAIN-208ENST00000571043 RPL39P62891 51 aaKnown RBP12.4□□□□□ -0.42
RPAIN-208ENST00000571043 Q6ZTI0 123 aa12.4□□□□□ -0.42
RPAIN-208ENST00000571043 BOD1L2Q8IYS8 172 aa12.4□□□□□ -0.42
RPAIN-208ENST00000571043 ZC2HC1BQ5TFG8 222 aa12.39□□□□□ -0.43
RPAIN-208ENST00000571043 A8MZ25 164 aa12.38□□□□□ -0.43
RPAIN-208ENST00000571043 PMVKQ15126 192 aa12.38□□□□□ -0.43
RPAIN-208ENST00000571043 DEFB104AQ8WTQ1 72 aa12.38□□□□□ -0.43
RPAIN-208ENST00000571043 TRBV10-1A0A0K0K1A3 114 aa12.37□□□□□ -0.43
RPAIN-208ENST00000571043 IGHV4-30-4P0DP06 118 aa12.37□□□□□ -0.43
RPAIN-208ENST00000571043 PAPPA-AS1Q5QFB9 102 aa12.37□□□□□ -0.43
RPAIN-208ENST00000571043 ZNF479Q96JC4 524 aa12.37□□□□□ -0.43
RPAIN-208ENST00000571043 SIVA1O15304 175 aa12.37□□□□□ -0.43
RPAIN-208ENST00000571043 PRB2P02812 416 aaPredicted RBP12.37□□□□□ -0.43
RPAIN-208ENST00000571043 TP73-AS1Q9UF72 201 aa12.37□□□□□ -0.43
RPAIN-208ENST00000571043 K7EIL1 84 aa12.36□□□□□ -0.43
RPAIN-208ENST00000571043 NPSP0C0P6 89 aa12.36□□□□□ -0.43
RPAIN-208ENST00000571043 NMUP48645 174 aa12.36□□□□□ -0.43
RPAIN-208ENST00000571043 KIR2DL5BQ8NHK3 375 aa12.36□□□□□ -0.43
RPAIN-208ENST00000571043 CST9LQ9H4G1 147 aa12.36□□□□□ -0.43
RPAIN-208ENST00000571043 Q9UF83 564 aa12.36□□□□□ -0.43
RPAIN-208ENST00000571043 PYGO1Q9Y3Y4 419 aa12.36□□□□□ -0.43
RPAIN-208ENST00000571043 SMIM9A6NGZ8 99 aa12.35□□□□□ -0.43
RPAIN-208ENST00000571043 K7EQD1 137 aa12.35□□□□□ -0.43
RPAIN-208ENST00000571043 BATFQ16520 125 aa12.35□□□□□ -0.43
RPAIN-208ENST00000571043 COL5A1-AS1Q5SY13 56 aa12.35□□□□□ -0.43
RPAIN-208ENST00000571043 C2orf91Q6ZV80 131 aa12.35□□□□□ -0.43
RPAIN-208ENST00000571043 COTL1Q14019 142 aa12.34□□□□□ -0.43
RPAIN-208ENST00000571043 TRBV7-3A0A075B6L6 115 aa12.33□□□□□ -0.44
RPAIN-208ENST00000571043 TRGV2A0A075B6R0 118 aa12.33□□□□□ -0.44
RPAIN-208ENST00000571043 IGKV2D-26A0A0A0MRZ7 120 aa12.33□□□□□ -0.44
RPAIN-208ENST00000571043 GAGE12BA1L429 117 aa12.33□□□□□ -0.44
RPAIN-208ENST00000571043 GAGE7O76087 117 aa12.33□□□□□ -0.44
RPAIN-208ENST00000571043 GAGE12FP0CL80 117 aa12.33□□□□□ -0.44
RPAIN-208ENST00000571043 GAGE12GP0CL81 117 aa12.33□□□□□ -0.44
RPAIN-208ENST00000571043 GAGE12IP0CL82 117 aa12.33□□□□□ -0.44
RPAIN-208ENST00000571043 HINT1P49773 126 aaPredicted RBP12.33□□□□□ -0.44
RPAIN-208ENST00000571043 RPL36AP83881 106 aaKnown RBP12.33□□□□□ -0.44
RPAIN-208ENST00000571043 PCP2Q8IVA1 136 aa12.33□□□□□ -0.44
RPAIN-208ENST00000571043 RPL36ALQ969Q0 106 aaKnown RBP12.33□□□□□ -0.44
RPAIN-208ENST00000571043 NBEAL2Q6ZNJ1 2754 aa12.33□□□□□ -0.44
RPAIN-208ENST00000571043 A0A1B0GV90 55 aa12.32□□□□□ -0.44
RPAIN-208ENST00000571043 CRYBA4P53673 196 aa12.32□□□□□ -0.44
RPAIN-208ENST00000571043 APOC4P55056 127 aa12.32□□□□□ -0.44
RPAIN-208ENST00000571043 TCTAP57738 103 aa12.32□□□□□ -0.44
RPAIN-208ENST00000571043 CHCHD7Q9BUK0 85 aa12.32□□□□□ -0.44
RPAIN-208ENST00000571043 IGLV4-69A0A075B6H9 119 aa12.32□□□□□ -0.44
RPAIN-208ENST00000571043 ZNRF2Q8NHG8 242 aa12.32□□□□□ -0.44
RPAIN-208ENST00000571043 IGLV4-3A0A075B6K6 122 aa12.31□□□□□ -0.44
RPAIN-208ENST00000571043 TRBV6-4A0A1B0GX49 114 aa12.31□□□□□ -0.44
RPAIN-208ENST00000571043 MPV17L2Q567V2 206 aa12.31□□□□□ -0.44
RPAIN-208ENST00000571043 TMEM97Q5BJF2 176 aa12.31□□□□□ -0.44
RPAIN-208ENST00000571043 DAZ4Q86SG3 579 aaKnown RBP12.31□□□□□ -0.44
RPAIN-208ENST00000571043 LINC00612Q8N6U2 182 aa12.31□□□□□ -0.44
RPAIN-208ENST00000571043 SLC25A29Q8N8R3 303 aa12.31□□□□□ -0.44
RPAIN-208ENST00000571043 DAZ3Q9NR90 486 aaKnown RBP12.31□□□□□ -0.44
RPAIN-208ENST00000571043 SPANXA1Q9NS26 97 aa12.31□□□□□ -0.44
RPAIN-208ENST00000571043 X6R8D5 127 aa12.31□□□□□ -0.44
RPAIN-208ENST00000571043 PHLDA1Q8WV24 401 aaPredicted RBP12.3□□□□□ -0.44
RPAIN-208ENST00000571043 VCX2Q9H322 139 aa12.3□□□□□ -0.44
RPAIN-208ENST00000571043 IGHV3-38A0A0C4DH36 116 aa12.29□□□□□ -0.44
RPAIN-208ENST00000571043 C11orf86A6NJI1 115 aa12.29□□□□□ -0.44
RPAIN-208ENST00000571043 E9PLD3 99 aa12.29□□□□□ -0.44
RPAIN-208ENST00000571043 UBE2D3P61077 147 aa12.29□□□□□ -0.44
RPAIN-208ENST00000571043 UBE2D2P62837 147 aa12.29□□□□□ -0.44
RPAIN-208ENST00000571043 DEFB121Q5J5C9 76 aa12.29□□□□□ -0.44
RPAIN-208ENST00000571043 BVES-AS1Q5T3Y7 98 aa12.29□□□□□ -0.44
RPAIN-208ENST00000571043 NFE4Q86UQ8 179 aa12.29□□□□□ -0.44
RPAIN-208ENST00000571043 HIGD1BQ9P298 99 aa12.29□□□□□ -0.44
RPAIN-208ENST00000571043 AMELXQ99217 191 aa12.28□□□□□ -0.44
RPAIN-208ENST00000571043 OPRPNQ99935 248 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-208ENST00000571043 OR11H2Q8NH07 326 aa12.27□□□□□ -0.44
RPAIN-208ENST00000571043 UBE2D4Q9Y2X8 147 aa12.27□□□□□ -0.44
RPAIN-208ENST00000571043 PRKDCP78527 4128 aaKnown RBP12.27□□□□□ -0.44
RPAIN-208ENST00000571043 DNAH9Q9NYC9 4486 aa12.27□□□□□ -0.45
RPAIN-208ENST00000571043 TRGV4A0A0C4DH28 118 aa12.27□□□□□ -0.45
RPAIN-208ENST00000571043 HERVK_113P61574 105 aa12.27□□□□□ -0.45
RPAIN-208ENST00000571043 HSD52Q0P140 79 aa12.27□□□□□ -0.45
RPAIN-208ENST00000571043 TIMM21Q9BVV7 248 aa12.27□□□□□ -0.45
RPAIN-208ENST00000571043 MEGF8Q7Z7M0 2845 aa12.26□□□□□ -0.45
RPAIN-208ENST00000571043 NACAE9PAV3 2078 aa12.26□□□□□ -0.45
RPAIN-208ENST00000571043 GAGE12JA6NER3 117 aa12.26□□□□□ -0.45
RPAIN-208ENST00000571043 EMP1P54849 157 aa12.26□□□□□ -0.45
RPAIN-208ENST00000571043 GAGE1Q13065 139 aa12.26□□□□□ -0.45
RPAIN-208ENST00000571043 GAGE4Q13068 117 aa12.26□□□□□ -0.45
RPAIN-208ENST00000571043 GAGE5Q13069 117 aa12.26□□□□□ -0.45
RPAIN-208ENST00000571043 FHL2Q14192 279 aa12.26□□□□□ -0.45
RPAIN-208ENST00000571043 GAGE13Q4V321 117 aa12.26□□□□□ -0.45
RPAIN-208ENST00000571043 FAM104AQ969W3 186 aa12.26□□□□□ -0.45
RPAIN-208ENST00000571043 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.25□□□□□ -0.45
RPAIN-208ENST00000571043 TRAV8-6A0A0B4J262 113 aa12.25□□□□□ -0.45
RPAIN-208ENST00000571043 IGKV2-29A2NJV5 120 aaPredicted RBP12.25□□□□□ -0.45
RPAIN-208ENST00000571043 MRAPQ8TCY5 172 aa12.25□□□□□ -0.45
RPAIN-208ENST00000571043 PRADC1Q9BSG0 188 aa12.25□□□□□ -0.45
RPAIN-208ENST00000571043 TTTY13Q9BZ97 58 aa12.25□□□□□ -0.45
RPAIN-208ENST00000571043 TRBV25-1A0A075B6N4 114 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms