RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 PRR34Q9NV39 138 aa3.53□□□□□ -1.84
CHD3-212ENST00000570758 ZNF727A8MUV8 499 aa3.52□□□□□ -1.85
CHD3-212ENST00000570758 A8MWL6 223 aa3.52□□□□□ -1.85
CHD3-212ENST00000570758 C9JQL5 133 aa3.52□□□□□ -1.85
CHD3-212ENST00000570758 NDUFS6O75380 124 aaKnown RBP3.52□□□□□ -1.85
CHD3-212ENST00000570758 GAS8-AS1O95177 125 aa3.52□□□□□ -1.85
CHD3-212ENST00000570758 HLA-DQA1P01909 254 aa3.52□□□□□ -1.85
CHD3-212ENST00000570758 AMTP48728 403 aa3.52□□□□□ -1.85
CHD3-212ENST00000570758 SRSF3P84103 164 aaKnown RBP3.52□□□□□ -1.85
CHD3-212ENST00000570758 COTL1Q14019 142 aa3.52□□□□□ -1.85
CHD3-212ENST00000570758 MIAQ16674 131 aa3.52□□□□□ -1.85
CHD3-212ENST00000570758 CT83Q5H943 113 aa3.52□□□□□ -1.85
CHD3-212ENST00000570758 IGLV10-54A0A075B6I4 117 aa3.51□□□□□ -1.85
CHD3-212ENST00000570758 A0A1B0GUV1 79 aa3.51□□□□□ -1.85
CHD3-212ENST00000570758 FAM229AH3BQW9 127 aa3.51□□□□□ -1.85
CHD3-212ENST00000570758 PRSS1P07477 247 aa3.51□□□□□ -1.85
CHD3-212ENST00000570758 REG3AQ06141 175 aa3.51□□□□□ -1.85
CHD3-212ENST00000570758 C14orf177Q52M58 125 aa3.51□□□□□ -1.85
CHD3-212ENST00000570758 SMIM15Q7Z3B0 74 aa3.51□□□□□ -1.85
CHD3-212ENST00000570758 TSKUQ8WUA8 353 aa3.51□□□□□ -1.85
CHD3-212ENST00000570758 RNF185Q96GF1 192 aa3.51□□□□□ -1.85
CHD3-212ENST00000570758 OSTCQ9NRP0 149 aa3.51□□□□□ -1.85
CHD3-212ENST00000570758 V9GYV3 84 aa3.51□□□□□ -1.85
CHD3-212ENST00000570758 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.5□□□□□ -1.85
CHD3-212ENST00000570758 TRBV6-5A0A0K0K1A5 114 aa3.5□□□□□ -1.85
CHD3-212ENST00000570758 A0A1B0GUT8 65 aa3.5□□□□□ -1.85
CHD3-212ENST00000570758 IGKV2-29A2NJV5 120 aaPredicted RBP3.5□□□□□ -1.85
CHD3-212ENST00000570758 FAM231BA6NCW3 169 aa3.5□□□□□ -1.85
CHD3-212ENST00000570758 HIGD1CA8MV81 97 aa3.5□□□□□ -1.85
CHD3-212ENST00000570758 UBE2L6O14933 153 aa3.5□□□□□ -1.85
CHD3-212ENST00000570758 RPL23P62829 140 aaKnown RBP3.5□□□□□ -1.85
CHD3-212ENST00000570758 TMEM241Q24JQ0 296 aa3.5□□□□□ -1.85
CHD3-212ENST00000570758 TEX261Q6UWH6 196 aa3.5□□□□□ -1.85
CHD3-212ENST00000570758 SCXQ7RTU7 201 aa3.5□□□□□ -1.85
CHD3-212ENST00000570758 LINC00528Q8N1L1 170 aa3.5□□□□□ -1.85
CHD3-212ENST00000570758 ISOC2Q96AB3 205 aa3.5□□□□□ -1.85
CHD3-212ENST00000570758 PKHD1L1Q86WI1 4243 aa3.49□□□□□ -1.85
CHD3-212ENST00000570758 TRAV8-4A0A0B4J246 113 aa3.49□□□□□ -1.85
CHD3-212ENST00000570758 SDHAF1A6NFY7 115 aa3.49□□□□□ -1.85
CHD3-212ENST00000570758 SMKR1H3BMG3 65 aa3.49□□□□□ -1.85
CHD3-212ENST00000570758 PANO1I0J062 215 aa3.49□□□□□ -1.85
CHD3-212ENST00000570758 NCR2O95944 276 aa3.49□□□□□ -1.85
CHD3-212ENST00000570758 TSHBP01222 138 aa3.49□□□□□ -1.85
CHD3-212ENST00000570758 APCSP02743 223 aa3.49□□□□□ -1.85
CHD3-212ENST00000570758 FGF6P10767 208 aa3.49□□□□□ -1.85
CHD3-212ENST00000570758 RAB4AP20338 218 aa3.49□□□□□ -1.85
CHD3-212ENST00000570758 PMCHP20382 165 aa3.49□□□□□ -1.85
CHD3-212ENST00000570758 RPS10P46783 165 aaKnown RBP3.49□□□□□ -1.85
CHD3-212ENST00000570758 RIGQ13278 110 aa3.49□□□□□ -1.85
CHD3-212ENST00000570758 ADIRFQ15847 76 aa3.49□□□□□ -1.85
CHD3-212ENST00000570758 FAM74A3Q4VXF1 159 aa3.49□□□□□ -1.85
CHD3-212ENST00000570758 AMN1Q8IY45 258 aa3.49□□□□□ -1.85
CHD3-212ENST00000570758 NUP35Q8NFH5 326 aa3.49□□□□□ -1.85
CHD3-212ENST00000570758 CIRBP-AS1Q8TBR5 109 aa3.49□□□□□ -1.85
CHD3-212ENST00000570758 BORCS7Q96B45 105 aa3.49□□□□□ -1.85
CHD3-212ENST00000570758 CHAC1Q9BUX1 264 aa3.49□□□□□ -1.85
CHD3-212ENST00000570758 TMEM191AQ9H0A3 160 aa3.49□□□□□ -1.85
CHD3-212ENST00000570758 TMEM242Q9NWH2 141 aa3.49□□□□□ -1.85
CHD3-212ENST00000570758 MYCBP2O75592 4640 aa3.48□□□□□ -1.85
CHD3-212ENST00000570758 IGKV3OR2-268A0A0C4DH90 116 aa3.48□□□□□ -1.85
CHD3-212ENST00000570758 hDV102S1A0JD36 115 aa3.48□□□□□ -1.85
CHD3-212ENST00000570758 GAGE12HA6NDE8 117 aa3.48□□□□□ -1.85
CHD3-212ENST00000570758 I3L3M4 83 aa3.48□□□□□ -1.85
CHD3-212ENST00000570758 SLPIP03973 132 aa3.48□□□□□ -1.85
CHD3-212ENST00000570758 ESDP10768 282 aa3.48□□□□□ -1.85
CHD3-212ENST00000570758 POLR2KP53803 58 aaKnown RBP3.48□□□□□ -1.85
CHD3-212ENST00000570758 KRTAP10-4P60372 401 aaPredicted RBP3.48□□□□□ -1.85
CHD3-212ENST00000570758 PEA15Q15121 130 aa3.48□□□□□ -1.85
CHD3-212ENST00000570758 AMMECR1LQ6DCA0 310 aa3.48□□□□□ -1.85
CHD3-212ENST00000570758 DGAT2L7PQ6IED9 249 aa3.48□□□□□ -1.85
CHD3-212ENST00000570758 RNASEKQ6P5S7 137 aaKnown RBP3.48□□□□□ -1.85
CHD3-212ENST00000570758 SDIM1Q6ZPB5 146 aa3.48□□□□□ -1.85
CHD3-212ENST00000570758 C15orf56Q8N910 161 aa3.48□□□□□ -1.85
CHD3-212ENST00000570758 NRACQ8N912 160 aa3.48□□□□□ -1.85
CHD3-212ENST00000570758 C9orf163Q8N9P6 203 aa3.48□□□□□ -1.85
CHD3-212ENST00000570758 MRAP2Q96G30 205 aa3.48□□□□□ -1.85
CHD3-212ENST00000570758 ST20Q9HBF5 79 aa3.48□□□□□ -1.85
CHD3-212ENST00000570758 NAT8Q9UHE5 227 aa3.48□□□□□ -1.85
CHD3-212ENST00000570758 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.48□□□□□ -1.85
CHD3-212ENST00000570758 TRBV27A0A0K0K1C4 114 aa3.47□□□□□ -1.85
CHD3-212ENST00000570758 SMIM27A0A1W2PRY6 76 aa3.47□□□□□ -1.85
CHD3-212ENST00000570758 H7C423 109 aa3.47□□□□□ -1.85
CHD3-212ENST00000570758 PLA2G1BP04054 148 aaKnown RBP3.47□□□□□ -1.85
CHD3-212ENST00000570758 CNBPP62633 177 aaKnown RBP3.47□□□□□ -1.85
CHD3-212ENST00000570758 FOXI1Q12951 378 aa3.47□□□□□ -1.85
CHD3-212ENST00000570758 MRPL51Q4U2R6 128 aaKnown RBP3.47□□□□□ -1.85
CHD3-212ENST00000570758 CLRN3Q8NCR9 226 aa3.47□□□□□ -1.85
CHD3-212ENST00000570758 CHCHD10Q8WYQ3 142 aaPredicted RBP3.47□□□□□ -1.85
CHD3-212ENST00000570758 FLG2Q5D862 2391 aaPredicted RBP3.47□□□□□ -1.85
CHD3-212ENST00000570758 IGHV3-64A0A075B6Q5 118 aa3.46□□□□□ -1.86
CHD3-212ENST00000570758 LINC00959A0A1B0GUT2 108 aa3.46□□□□□ -1.86
CHD3-212ENST00000570758 A0A1B0GXF2 115 aa3.46□□□□□ -1.86
CHD3-212ENST00000570758 CHTF8P0CG12 524 aa3.46□□□□□ -1.86
CHD3-212ENST00000570758 ZNF25P17030 456 aaPredicted RBP3.46□□□□□ -1.86
CHD3-212ENST00000570758 CAMPP49913 170 aa3.46□□□□□ -1.86
CHD3-212ENST00000570758 HIGD2BQ4VC39 106 aa3.46□□□□□ -1.86
CHD3-212ENST00000570758 FAM104BQ5XKR9 115 aa3.46□□□□□ -1.86
CHD3-212ENST00000570758 MRPL54Q6P161 138 aaKnown RBP3.46□□□□□ -1.86
CHD3-212ENST00000570758 OR5A1Q8NGJ0 315 aa3.46□□□□□ -1.86
CHD3-212ENST00000570758 SMDT1Q9H4I9 107 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms