RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 C20orf203Q8NBC4 194 aa14.6□□□□□ -0.07
RBFOX1-219ENST00000569895 RNASE7Q9H1E1 156 aaKnown RBP14.6□□□□□ -0.07
RBFOX1-219ENST00000569895 MYCBP2O75592 4640 aa14.6□□□□□ -0.07
RBFOX1-219ENST00000569895 IGLV10-54A0A075B6I4 117 aa14.59□□□□□ -0.07
RBFOX1-219ENST00000569895 AMTP48728 403 aa14.59□□□□□ -0.07
RBFOX1-219ENST00000569895 KRTAP29-1A8MX34 341 aaPredicted RBP14.58□□□□□ -0.08
RBFOX1-219ENST00000569895 IGLV4-60A0A075B6I1 120 aa14.57□□□□□ -0.08
RBFOX1-219ENST00000569895 TMEM250H0YL14 139 aa14.57□□□□□ -0.08
RBFOX1-219ENST00000569895 K7EN84 100 aa14.57□□□□□ -0.08
RBFOX1-219ENST00000569895 Q6ZNX1 250 aa14.57□□□□□ -0.08
RBFOX1-219ENST00000569895 AKAP14Q86UN6 197 aa14.57□□□□□ -0.08
RBFOX1-219ENST00000569895 TEX261Q6UWH6 196 aa14.56□□□□□ -0.08
RBFOX1-219ENST00000569895 GATD1Q8NB37 220 aa14.55□□□□□ -0.08
RBFOX1-219ENST00000569895 AP5S1Q9NUS5 200 aa14.55□□□□□ -0.08
RBFOX1-219ENST00000569895 hDV102S1A0JD36 115 aa14.54□□□□□ -0.08
RBFOX1-219ENST00000569895 A8MWL6 223 aa14.54□□□□□ -0.08
RBFOX1-219ENST00000569895 GATCO43716 136 aaKnown RBP14.54□□□□□ -0.08
RBFOX1-219ENST00000569895 ALKAL2Q6UX46 152 aa14.53□□□□□ -0.08
RBFOX1-219ENST00000569895 GTSF1Q8WW33 167 aa14.53□□□□□ -0.08
RBFOX1-219ENST00000569895 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.52□□□□□ -0.09
RBFOX1-219ENST00000569895 TRAV26-2A0A0B4J265 109 aa14.52□□□□□ -0.09
RBFOX1-219ENST00000569895 NCR2O95944 276 aa14.52□□□□□ -0.09
RBFOX1-219ENST00000569895 CNBPP62633 177 aaKnown RBP14.52□□□□□ -0.09
RBFOX1-219ENST00000569895 FAM231DQ6ZW35 169 aa14.52□□□□□ -0.09
RBFOX1-219ENST00000569895 AMMECR1LQ6DCA0 310 aa14.51□□□□□ -0.09
RBFOX1-219ENST00000569895 CFAP161Q6P656 301 aa14.51□□□□□ -0.09
RBFOX1-219ENST00000569895 SDIM1Q6ZPB5 146 aa14.51□□□□□ -0.09
RBFOX1-219ENST00000569895 BORCS7Q96B45 105 aa14.51□□□□□ -0.09
RBFOX1-219ENST00000569895 GFRA4Q9GZZ7 299 aa14.51□□□□□ -0.09
RBFOX1-219ENST00000569895 H7C423 109 aa14.5□□□□□ -0.09
RBFOX1-219ENST00000569895 CEBPGP53567 150 aa14.5□□□□□ -0.09
RBFOX1-219ENST00000569895 KRTAP10-4P60372 401 aaPredicted RBP14.5□□□□□ -0.09
RBFOX1-219ENST00000569895 RPL37AP61513 92 aaKnown RBP14.5□□□□□ -0.09
RBFOX1-219ENST00000569895 LYPD6BQ8NI32 183 aa14.5□□□□□ -0.09
RBFOX1-219ENST00000569895 CT83Q5H943 113 aa14.49□□□□□ -0.09
RBFOX1-219ENST00000569895 IGHV3-64A0A075B6Q5 118 aa14.48□□□□□ -0.09
RBFOX1-219ENST00000569895 OXTP01178 125 aa14.48□□□□□ -0.09
RBFOX1-219ENST00000569895 APCSP02743 223 aa14.48□□□□□ -0.09
RBFOX1-219ENST00000569895 FOXA3P55318 350 aaPredicted RBP14.48□□□□□ -0.09
RBFOX1-219ENST00000569895 RPL39LQ96EH5 51 aaKnown RBP14.48□□□□□ -0.09
RBFOX1-219ENST00000569895 DPH3Q96FX2 82 aa14.48□□□□□ -0.09
RBFOX1-219ENST00000569895 EIF5A2Q9GZV4 153 aaKnown RBP14.48□□□□□ -0.09
RBFOX1-219ENST00000569895 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.48□□□□□ -0.09
RBFOX1-219ENST00000569895 RNASEKQ6P5S7 137 aaKnown RBP14.47□□□□□ -0.09
RBFOX1-219ENST00000569895 hCG_2014768A0A024R1R8 64 aa14.46□□□□□ -0.09
RBFOX1-219ENST00000569895 IGKV3OR2-268A0A0C4DH90 116 aa14.46□□□□□ -0.09
RBFOX1-219ENST00000569895 SDHAF1A6NFY7 115 aa14.46□□□□□ -0.09
RBFOX1-219ENST00000569895 NDUFS6O75380 124 aaKnown RBP14.46□□□□□ -0.09
RBFOX1-219ENST00000569895 GAGE12HA6NDE8 117 aa14.45□□□□□ -0.1
RBFOX1-219ENST00000569895 PMCHP20382 165 aa14.45□□□□□ -0.1
RBFOX1-219ENST00000569895 FAM210AQ96ND0 272 aa14.45□□□□□ -0.1
RBFOX1-219ENST00000569895 SMIM7Q9BQ49 75 aa14.45□□□□□ -0.1
RBFOX1-219ENST00000569895 I3L3M4 83 aa14.44□□□□□ -0.1
RBFOX1-219ENST00000569895 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.43□□□□□ -0.1
RBFOX1-219ENST00000569895 IGKV2-29A2NJV5 120 aaPredicted RBP14.43□□□□□ -0.1
RBFOX1-219ENST00000569895 FGF6P10767 208 aa14.43□□□□□ -0.1
RBFOX1-219ENST00000569895 TSKUQ8WUA8 353 aa14.43□□□□□ -0.1
RBFOX1-219ENST00000569895 BTF3L4Q96K17 158 aa14.43□□□□□ -0.1
RBFOX1-219ENST00000569895 TRBV6-5A0A0K0K1A5 114 aa14.42□□□□□ -0.1
RBFOX1-219ENST00000569895 A0A1B0GUT8 65 aa14.42□□□□□ -0.1
RBFOX1-219ENST00000569895 ZNF25P17030 456 aaPredicted RBP14.42□□□□□ -0.1
RBFOX1-219ENST00000569895 CIRBPQ14011 172 aaKnown RBP14.42□□□□□ -0.1
RBFOX1-219ENST00000569895 CHCHD10Q8WYQ3 142 aaPredicted RBP14.42□□□□□ -0.1
RBFOX1-219ENST00000569895 RNF185Q96GF1 192 aa14.42□□□□□ -0.1
RBFOX1-219ENST00000569895 TMEM101Q96IK0 257 aa14.42□□□□□ -0.1
RBFOX1-219ENST00000569895 ST20Q9HBF5 79 aa14.42□□□□□ -0.1
RBFOX1-219ENST00000569895 FAM231BA6NCW3 169 aa14.41□□□□□ -0.1
RBFOX1-219ENST00000569895 ZNF727A8MUV8 499 aa14.41□□□□□ -0.1
RBFOX1-219ENST00000569895 HIGD1CA8MV81 97 aa14.41□□□□□ -0.1
RBFOX1-219ENST00000569895 PANO1I0J062 215 aa14.41□□□□□ -0.1
RBFOX1-219ENST00000569895 SLPIP03973 132 aa14.41□□□□□ -0.1
RBFOX1-219ENST00000569895 LINC01551Q86U37 167 aa14.41□□□□□ -0.1
RBFOX1-219ENST00000569895 TMEM191AQ9H0A3 160 aa14.4□□□□□ -0.1
RBFOX1-219ENST00000569895 OSTCQ9NRP0 149 aa14.4□□□□□ -0.1
RBFOX1-219ENST00000569895 RPS10P46783 165 aaKnown RBP14.39□□□□□ -0.11
RBFOX1-219ENST00000569895 SERTAD4-AS1Q5TG53 156 aa14.39□□□□□ -0.11
RBFOX1-219ENST00000569895 C15orf56Q8N910 161 aa14.39□□□□□ -0.11
RBFOX1-219ENST00000569895 OR5A1Q8NGJ0 315 aa14.38□□□□□ -0.11
RBFOX1-219ENST00000569895 MRAP2Q96G30 205 aa14.38□□□□□ -0.11
RBFOX1-219ENST00000569895 SRP19P09132 144 aaKnown RBP14.36□□□□□ -0.11
RBFOX1-219ENST00000569895 RIGQ13278 110 aa14.36□□□□□ -0.11
RBFOX1-219ENST00000569895 HIGD2BQ4VC39 106 aa14.36□□□□□ -0.11
RBFOX1-219ENST00000569895 A0A087WYN8 130 aa14.35□□□□□ -0.11
RBFOX1-219ENST00000569895 ESDP10768 282 aa14.35□□□□□ -0.11
RBFOX1-219ENST00000569895 RAB4AP20338 218 aa14.35□□□□□ -0.11
RBFOX1-219ENST00000569895 SPACA4Q8TDM5 124 aa14.35□□□□□ -0.11
RBFOX1-219ENST00000569895 PPP1R17O96001 155 aa14.34□□□□□ -0.11
RBFOX1-219ENST00000569895 TSHBP01222 138 aa14.34□□□□□ -0.11
RBFOX1-219ENST00000569895 CHTF8P0CG12 524 aa14.34□□□□□ -0.11
RBFOX1-219ENST00000569895 TMEM242Q9NWH2 141 aa14.34□□□□□ -0.11
RBFOX1-219ENST00000569895 GVQW2A0A096LPI5 108 aaPredicted RBP14.33□□□□□ -0.12
RBFOX1-219ENST00000569895 TRBV27A0A0K0K1C4 114 aa14.33□□□□□ -0.12
RBFOX1-219ENST00000569895 GAS8-AS1O95177 125 aa14.33□□□□□ -0.12
RBFOX1-219ENST00000569895 POLR2KP53803 58 aaKnown RBP14.33□□□□□ -0.12
RBFOX1-219ENST00000569895 COX6A2Q02221 97 aa14.33□□□□□ -0.12
RBFOX1-219ENST00000569895 FOXI1Q12951 378 aa14.33□□□□□ -0.12
RBFOX1-219ENST00000569895 SS18Q15532 418 aa14.33□□□□□ -0.12
RBFOX1-219ENST00000569895 TMEM241Q24JQ0 296 aa14.33□□□□□ -0.12
RBFOX1-219ENST00000569895 FAM74A3Q4VXF1 159 aa14.33□□□□□ -0.12
RBFOX1-219ENST00000569895 LINC00959A0A1B0GUT2 108 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms