RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 C11orf72Q8NBR9 251 aa4.39□□□□□ -1.71
CYLD-216ENST00000569891 COPS9Q8WXC6 57 aa4.39□□□□□ -1.71
CYLD-216ENST00000569891 NOTCH3Q9UM47 2321 aa4.39□□□□□ -1.71
CYLD-216ENST00000569891 LRP1BQ9NZR2 4599 aa4.39□□□□□ -1.71
CYLD-216ENST00000569891 RYR1P21817 5038 aa4.39□□□□□ -1.71
CYLD-216ENST00000569891 WIPF1O43516 503 aa4.39□□□□□ -1.71
CYLD-216ENST00000569891 ATOH7Q8N100 152 aa4.39□□□□□ -1.71
CYLD-216ENST00000569891 C20orf203Q8NBC4 194 aa4.39□□□□□ -1.71
CYLD-216ENST00000569891 TIMM21Q9BVV7 248 aa4.39□□□□□ -1.71
CYLD-216ENST00000569891 ZMAT4Q9H898 229 aa4.39□□□□□ -1.71
CYLD-216ENST00000569891 NOP10Q9NPE3 64 aaKnown RBP4.39□□□□□ -1.71
CYLD-216ENST00000569891 LINC00315P59091 139 aa4.38□□□□□ -1.71
CYLD-216ENST00000569891 PLEKHB2Q96CS7 222 aa4.38□□□□□ -1.71
CYLD-216ENST00000569891 TMEM238LA0A1B0GVL6 79 aa4.38□□□□□ -1.71
CYLD-216ENST00000569891 A6NJY4 79 aa4.38□□□□□ -1.71
CYLD-216ENST00000569891 LINC00587B1AMM8 73 aa4.38□□□□□ -1.71
CYLD-216ENST00000569891 NMUP48645 174 aa4.38□□□□□ -1.71
CYLD-216ENST00000569891 TENM2Q9NT68 2774 aa4.38□□□□□ -1.71
CYLD-216ENST00000569891 TRBV25-1A0A075B6N4 114 aa4.38□□□□□ -1.71
CYLD-216ENST00000569891 ODF1Q14990 250 aa4.38□□□□□ -1.71
CYLD-216ENST00000569891 ZNF124Q15973 351 aa4.38□□□□□ -1.71
CYLD-216ENST00000569891 GEMIN7Q9H840 131 aaKnown RBP4.38□□□□□ -1.71
CYLD-216ENST00000569891 SPART-AS1P0CW21 52 aa4.37□□□□□ -1.71
CYLD-216ENST00000569891 IGLL1P15814 213 aa4.37□□□□□ -1.71
CYLD-216ENST00000569891 ZNF25P17030 456 aaPredicted RBP4.37□□□□□ -1.71
CYLD-216ENST00000569891 Q6ZQT7 251 aa4.37□□□□□ -1.71
CYLD-216ENST00000569891 GAGE12BA1L429 117 aa4.37□□□□□ -1.71
CYLD-216ENST00000569891 GAGE7O76087 117 aa4.37□□□□□ -1.71
CYLD-216ENST00000569891 GAGE12FP0CL80 117 aa4.37□□□□□ -1.71
CYLD-216ENST00000569891 GAGE12GP0CL81 117 aa4.37□□□□□ -1.71
CYLD-216ENST00000569891 GAGE12IP0CL82 117 aa4.37□□□□□ -1.71
CYLD-216ENST00000569891 DAD1P61803 113 aa4.37□□□□□ -1.71
CYLD-216ENST00000569891 HSD52Q0P140 79 aa4.37□□□□□ -1.71
CYLD-216ENST00000569891 ZNF575Q86XF7 245 aa4.37□□□□□ -1.71
CYLD-216ENST00000569891 TMEM243Q9BU79 118 aa4.37□□□□□ -1.71
CYLD-216ENST00000569891 LGALS3P17931 250 aaKnown RBP4.37□□□□□ -1.71
CYLD-216ENST00000569891 TAL2Q16559 108 aa4.37□□□□□ -1.71
CYLD-216ENST00000569891 ZC2HC1BQ5TFG8 222 aa4.37□□□□□ -1.71
CYLD-216ENST00000569891 Q8N976 141 aa4.37□□□□□ -1.71
CYLD-216ENST00000569891 ZNRF2Q8NHG8 242 aa4.37□□□□□ -1.71
CYLD-216ENST00000569891 JPT2Q9H910 190 aa4.37□□□□□ -1.71
CYLD-216ENST00000569891 OR5A1Q8NGJ0 315 aa4.37□□□□□ -1.71
CYLD-216ENST00000569891 IGHV3-73A0A0B4J1V6 119 aa4.36□□□□□ -1.71
CYLD-216ENST00000569891 BATFQ16520 125 aa4.36□□□□□ -1.71
CYLD-216ENST00000569891 NEXN-AS1Q8NBZ9 246 aa4.36□□□□□ -1.71
CYLD-216ENST00000569891 IL17DQ8TAD2 202 aa4.36□□□□□ -1.71
CYLD-216ENST00000569891 BAALCQ8WXS3 180 aa4.36□□□□□ -1.71
CYLD-216ENST00000569891 C14orf144Q96I85 54 aa4.36□□□□□ -1.71
CYLD-216ENST00000569891 GTSF1LQ9H1H1 148 aa4.36□□□□□ -1.71
CYLD-216ENST00000569891 C19orf73Q9NVV2 129 aa4.36□□□□□ -1.71
CYLD-216ENST00000569891 MRPL35Q9NZE8 188 aaKnown RBP4.36□□□□□ -1.71
CYLD-216ENST00000569891 SONP18583 2426 aaKnown RBP4.36□□□□□ -1.71
CYLD-216ENST00000569891 RBMY1A1P0DJD3 496 aaKnown RBP4.36□□□□□ -1.71
CYLD-216ENST00000569891 RBMY1CP0DJD4 496 aa4.36□□□□□ -1.71
CYLD-216ENST00000569891 RBMY1FQ15415 496 aaKnown RBP4.36□□□□□ -1.71
CYLD-216ENST00000569891 LINC00173Q6ZV60 143 aa4.36□□□□□ -1.71
CYLD-216ENST00000569891 HIGD1BQ9P298 99 aa4.36□□□□□ -1.71
CYLD-216ENST00000569891 PRO0255Q9UI72 69 aa4.36□□□□□ -1.71
CYLD-216ENST00000569891 FLNAP21333 2647 aaKnown RBP4.36□□□□□ -1.71
CYLD-216ENST00000569891 A0A096LNJ9 63 aa4.36□□□□□ -1.71
CYLD-216ENST00000569891 hDV102S1A0JD36 115 aa4.36□□□□□ -1.71
CYLD-216ENST00000569891 PRSS29PA6NIE9 313 aa4.36□□□□□ -1.71
CYLD-216ENST00000569891 ATP5G1P05496 136 aa4.36□□□□□ -1.71
CYLD-216ENST00000569891 CTAG1AP78358 180 aa4.36□□□□□ -1.71
CYLD-216ENST00000569891 MRPS36P82909 103 aaKnown RBP4.36□□□□□ -1.71
CYLD-216ENST00000569891 TMEM170BQ5T4T1 132 aa4.36□□□□□ -1.71
CYLD-216ENST00000569891 SCGB1D4Q6XE38 83 aa4.36□□□□□ -1.71
CYLD-216ENST00000569891 C11orf86A6NJI1 115 aa4.36□□□□□ -1.71
CYLD-216ENST00000569891 CCL25O15444 150 aa4.36□□□□□ -1.71
CYLD-216ENST00000569891 SPRY2O43597 315 aa4.36□□□□□ -1.71
CYLD-216ENST00000569891 TENM3Q9P273 2699 aa4.35□□□□□ -1.71
CYLD-216ENST00000569891 MYO9AB2RTY4 2548 aa4.35□□□□□ -1.71
CYLD-216ENST00000569891 LYRM7Q5U5X0 104 aa4.35□□□□□ -1.71
CYLD-216ENST00000569891 Q6ZTI0 123 aa4.35□□□□□ -1.71
CYLD-216ENST00000569891 TSHBP01222 138 aa4.35□□□□□ -1.71
CYLD-216ENST00000569891 EMP1P54849 157 aa4.35□□□□□ -1.71
CYLD-216ENST00000569891 KRTAP10-3P60369 221 aa4.35□□□□□ -1.71
CYLD-216ENST00000569891 HERVK_113P63121 156 aa4.35□□□□□ -1.71
CYLD-216ENST00000569891 CDPF1Q6NVV7 123 aa4.35□□□□□ -1.71
CYLD-216ENST00000569891 SFTA2Q6UW10 78 aa4.35□□□□□ -1.71
CYLD-216ENST00000569891 CST9LQ9H4G1 147 aa4.35□□□□□ -1.71
CYLD-216ENST00000569891 TLN2Q9Y4G6 2542 aa4.35□□□□□ -1.71
CYLD-216ENST00000569891 A8MZ25 164 aa4.35□□□□□ -1.71
CYLD-216ENST00000569891 CSDC2Q9Y534 153 aaKnown RBP4.35□□□□□ -1.71
CYLD-216ENST00000569891 PTTG1IPP53801 180 aa4.34□□□□□ -1.71
CYLD-216ENST00000569891 CIRBPQ14011 172 aaKnown RBP4.34□□□□□ -1.71
CYLD-216ENST00000569891 UFSP1Q6NVU6 142 aa4.34□□□□□ -1.71
CYLD-216ENST00000569891 DKK2Q9UBU2 259 aa4.34□□□□□ -1.71
CYLD-216ENST00000569891 HHLA3Q9XRX5 114 aa4.34□□□□□ -1.71
CYLD-216ENST00000569891 FASNP49327 2511 aaKnown RBP4.34□□□□□ -1.71
CYLD-216ENST00000569891 GAGE12JA6NER3 117 aa4.34□□□□□ -1.71
CYLD-216ENST00000569891 IGIPA6NJ69 53 aa4.34□□□□□ -1.71
CYLD-216ENST00000569891 E9PLD3 99 aa4.34□□□□□ -1.71
CYLD-216ENST00000569891 DEFB130BP0DP73 79 aa4.34□□□□□ -1.71
CYLD-216ENST00000569891 DEFB130AP0DP74 79 aa4.34□□□□□ -1.71
CYLD-216ENST00000569891 GAGE1Q13065 139 aa4.34□□□□□ -1.71
CYLD-216ENST00000569891 GAGE4Q13068 117 aa4.34□□□□□ -1.71
CYLD-216ENST00000569891 GAGE5Q13069 117 aa4.34□□□□□ -1.71
CYLD-216ENST00000569891 GAGE13Q4V321 117 aa4.34□□□□□ -1.71
CYLD-216ENST00000569891 CHAC1Q9BUX1 264 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms