RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 BORCS7Q96B45 105 aa9.01□□□□□ -0.97
GTF3C1-211ENST00000569653 OSTCQ9NRP0 149 aa9.01□□□□□ -0.97
GTF3C1-211ENST00000569653 V9GYV3 84 aa9.01□□□□□ -0.97
GTF3C1-211ENST00000569653 PKIAP61925 76 aa9□□□□□ -0.97
GTF3C1-211ENST00000569653 ADIRFQ15847 76 aa9□□□□□ -0.97
GTF3C1-211ENST00000569653 KRTAP26-1Q6PEX3 210 aa9□□□□□ -0.97
GTF3C1-211ENST00000569653 RASL11AQ6T310 242 aa9□□□□□ -0.97
GTF3C1-211ENST00000569653 UQCC3Q6UW78 93 aa9□□□□□ -0.97
GTF3C1-211ENST00000569653 COMMD7Q86VX2 200 aa9□□□□□ -0.97
GTF3C1-211ENST00000569653 Q8N976 141 aa9□□□□□ -0.97
GTF3C1-211ENST00000569653 GFRA4Q9GZZ7 299 aa9□□□□□ -0.97
GTF3C1-211ENST00000569653 COX11Q9Y6N1 276 aa9□□□□□ -0.97
GTF3C1-211ENST00000569653 FAM231BA6NCW3 169 aa8.99□□□□□ -0.97
GTF3C1-211ENST00000569653 ELOBQ15370 118 aa8.99□□□□□ -0.97
GTF3C1-211ENST00000569653 TSKUQ8WUA8 353 aa8.99□□□□□ -0.97
GTF3C1-211ENST00000569653 RMI2Q96E14 147 aa8.99□□□□□ -0.97
GTF3C1-211ENST00000569653 PGLYRP4Q96LB8 373 aa8.99□□□□□ -0.97
GTF3C1-211ENST00000569653 TRBV25-1A0A075B6N4 114 aa8.98□□□□□ -0.97
GTF3C1-211ENST00000569653 TMEM218A2RU14 115 aa8.98□□□□□ -0.97
GTF3C1-211ENST00000569653 FOXA3P55318 350 aaPredicted RBP8.98□□□□□ -0.97
GTF3C1-211ENST00000569653 CIRBP-AS1Q8TBR5 109 aa8.98□□□□□ -0.97
GTF3C1-211ENST00000569653 CHCHD5Q9BSY4 110 aa8.98□□□□□ -0.97
GTF3C1-211ENST00000569653 CHAC1Q9BUX1 264 aa8.98□□□□□ -0.97
GTF3C1-211ENST00000569653 NIT2Q9NQR4 276 aa8.98□□□□□ -0.97
GTF3C1-211ENST00000569653 HMCN2Q8NDA2 5059 aa8.97□□□□□ -0.97
GTF3C1-211ENST00000569653 HIGD1CA8MV81 97 aa8.97□□□□□ -0.97
GTF3C1-211ENST00000569653 TMEM262E9PQX1 116 aa8.97□□□□□ -0.97
GTF3C1-211ENST00000569653 IGHV1-24A0A0C4DH33 117 aa8.96□□□□□ -0.98
GTF3C1-211ENST00000569653 A0A1B0GUT8 65 aa8.96□□□□□ -0.98
GTF3C1-211ENST00000569653 USP17L23D6RBM5 183 aa8.96□□□□□ -0.98
GTF3C1-211ENST00000569653 PLA2G1BP04054 148 aaKnown RBP8.96□□□□□ -0.98
GTF3C1-211ENST00000569653 CLPSL2Q6UWE3 100 aa8.96□□□□□ -0.98
GTF3C1-211ENST00000569653 C1orf43Q9BWL3 253 aa8.96□□□□□ -0.98
GTF3C1-211ENST00000569653 PRR34Q9NV39 138 aa8.96□□□□□ -0.98
GTF3C1-211ENST00000569653 KRTAP29-1A8MX34 341 aaPredicted RBP8.95□□□□□ -0.98
GTF3C1-211ENST00000569653 ANGP03950 147 aaKnown RBP8.95□□□□□ -0.98
GTF3C1-211ENST00000569653 PRSS1P07477 247 aa8.95□□□□□ -0.98
GTF3C1-211ENST00000569653 RBX1P62877 108 aa8.95□□□□□ -0.98
GTF3C1-211ENST00000569653 Q0VG73 95 aa8.95□□□□□ -0.98
GTF3C1-211ENST00000569653 GAGE6Q13070 117 aa8.95□□□□□ -0.98
GTF3C1-211ENST00000569653 IQCJQ1A5X6 159 aa8.95□□□□□ -0.98
GTF3C1-211ENST00000569653 GATD1Q8NB37 220 aa8.95□□□□□ -0.98
GTF3C1-211ENST00000569653 TRAV26-2A0A0B4J265 109 aa8.94□□□□□ -0.98
GTF3C1-211ENST00000569653 PANO1I0J062 215 aa8.94□□□□□ -0.98
GTF3C1-211ENST00000569653 HLA-DQA1P01909 254 aa8.94□□□□□ -0.98
GTF3C1-211ENST00000569653 CRPP02741 224 aa8.94□□□□□ -0.98
GTF3C1-211ENST00000569653 NUP35Q8NFH5 326 aa8.94□□□□□ -0.98
GTF3C1-211ENST00000569653 NAT8BQ9UHF3 227 aa8.94□□□□□ -0.98
GTF3C1-211ENST00000569653 SMIM27A0A1W2PRY6 76 aa8.93□□□□□ -0.98
GTF3C1-211ENST00000569653 F8W036 122 aa8.93□□□□□ -0.98
GTF3C1-211ENST00000569653 J3QL48 77 aa8.93□□□□□ -0.98
GTF3C1-211ENST00000569653 PNRC1Q12796 327 aaPredicted RBP8.93□□□□□ -0.98
GTF3C1-211ENST00000569653 RIGQ13278 110 aa8.93□□□□□ -0.98
GTF3C1-211ENST00000569653 COTL1Q14019 142 aa8.93□□□□□ -0.98
GTF3C1-211ENST00000569653 C10orf91Q5T1B1 145 aa8.93□□□□□ -0.98
GTF3C1-211ENST00000569653 DEFB104AQ8WTQ1 72 aa8.93□□□□□ -0.98
GTF3C1-211ENST00000569653 SEC11CQ9BY50 192 aa8.93□□□□□ -0.98
GTF3C1-211ENST00000569653 HNRNPA3P51991 378 aaKnown RBP8.92□□□□□ -0.98
GTF3C1-211ENST00000569653 LINC00269Q8N2A0 174 aa8.92□□□□□ -0.98
GTF3C1-211ENST00000569653 C20orf203Q8NBC4 194 aa8.92□□□□□ -0.98
GTF3C1-211ENST00000569653 TMEM243Q9BU79 118 aa8.92□□□□□ -0.98
GTF3C1-211ENST00000569653 TMEM191AQ9H0A3 160 aa8.92□□□□□ -0.98
GTF3C1-211ENST00000569653 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.92□□□□□ -0.98
GTF3C1-211ENST00000569653 AMTP48728 403 aa8.91□□□□□ -0.98
GTF3C1-211ENST00000569653 MIAQ16674 131 aa8.91□□□□□ -0.98
GTF3C1-211ENST00000569653 RPL39LQ96EH5 51 aaKnown RBP8.91□□□□□ -0.98
GTF3C1-211ENST00000569653 IGLV4-60A0A075B6I1 120 aa8.9□□□□□ -0.98
GTF3C1-211ENST00000569653 UBE2L6O14933 153 aa8.9□□□□□ -0.98
GTF3C1-211ENST00000569653 NCR2O95944 276 aa8.9□□□□□ -0.98
GTF3C1-211ENST00000569653 MRAP2Q96G30 205 aa8.9□□□□□ -0.98
GTF3C1-211ENST00000569653 CARHSP1Q9Y2V2 147 aaKnown RBP8.9□□□□□ -0.98
GTF3C1-211ENST00000569653 IGLV10-54A0A075B6I4 117 aa8.89□□□□□ -0.99
GTF3C1-211ENST00000569653 A0A1B0GW15 77 aa8.89□□□□□ -0.99
GTF3C1-211ENST00000569653 SDHAF1A6NFY7 115 aa8.89□□□□□ -0.99
GTF3C1-211ENST00000569653 C14orf177Q52M58 125 aa8.89□□□□□ -0.99
GTF3C1-211ENST00000569653 TRBV6-5A0A0K0K1A5 114 aa8.88□□□□□ -0.99
GTF3C1-211ENST00000569653 PPP1R2P9O14990 202 aa8.88□□□□□ -0.99
GTF3C1-211ENST00000569653 APCSP02743 223 aa8.88□□□□□ -0.99
GTF3C1-211ENST00000569653 MT-ND4LP03901 98 aa8.88□□□□□ -0.99
GTF3C1-211ENST00000569653 SLPIP03973 132 aa8.88□□□□□ -0.99
GTF3C1-211ENST00000569653 RAB4AP20338 218 aa8.88□□□□□ -0.99
GTF3C1-211ENST00000569653 AMN1Q8IY45 258 aa8.88□□□□□ -0.99
GTF3C1-211ENST00000569653 C9orf163Q8N9P6 203 aa8.88□□□□□ -0.99
GTF3C1-211ENST00000569653 ANAPC16Q96DE5 110 aa8.88□□□□□ -0.99
GTF3C1-211ENST00000569653 ST20Q9HBF5 79 aa8.88□□□□□ -0.99
GTF3C1-211ENST00000569653 A0A1B0GUV1 79 aa8.87□□□□□ -0.99
GTF3C1-211ENST00000569653 A0A1B0GXF2 115 aa8.87□□□□□ -0.99
GTF3C1-211ENST00000569653 I3L3M4 83 aa8.87□□□□□ -0.99
GTF3C1-211ENST00000569653 GAS8-AS1O95177 125 aa8.87□□□□□ -0.99
GTF3C1-211ENST00000569653 REG3AQ06141 175 aa8.87□□□□□ -0.99
GTF3C1-211ENST00000569653 SDIM1Q6ZPB5 146 aa8.87□□□□□ -0.99
GTF3C1-211ENST00000569653 SLC7A5P1Q8MH63 180 aa8.87□□□□□ -0.99
GTF3C1-211ENST00000569653 RNF185Q96GF1 192 aa8.87□□□□□ -0.99
GTF3C1-211ENST00000569653 PPP1R17O96001 155 aa8.86□□□□□ -0.99
GTF3C1-211ENST00000569653 S100A8P05109 93 aa8.86□□□□□ -0.99
GTF3C1-211ENST00000569653 PMCHP20382 165 aa8.86□□□□□ -0.99
GTF3C1-211ENST00000569653 H7C423 109 aa8.85□□□□□ -0.99
GTF3C1-211ENST00000569653 CAMPP49913 170 aa8.85□□□□□ -0.99
GTF3C1-211ENST00000569653 HBBP68871 147 aa8.85□□□□□ -0.99
GTF3C1-211ENST00000569653 DGAT2L7PQ6IED9 249 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms