RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 IGKCP01834 107 aa11.19□□□□□ -0.62
SNX20-204ENST00000568993 SLC25A34Q6PIV7 304 aa11.19□□□□□ -0.62
SNX20-204ENST00000568993 NOTCH3Q9UM47 2321 aa11.19□□□□□ -0.62
SNX20-204ENST00000568993 COX8AP10176 69 aa11.18□□□□□ -0.62
SNX20-204ENST00000568993 DNAJC30Q96LL9 226 aa11.18□□□□□ -0.62
SNX20-204ENST00000568993 TP53TG1Q9Y2A0 90 aa11.18□□□□□ -0.62
SNX20-204ENST00000568993 TRGV1A0A0A0MS02 117 aa11.18□□□□□ -0.62
SNX20-204ENST00000568993 WIPF1O43516 503 aa11.18□□□□□ -0.62
SNX20-204ENST00000568993 BAALCQ8WXS3 180 aa11.18□□□□□ -0.62
SNX20-204ENST00000568993 TMEM141Q96I45 108 aa11.18□□□□□ -0.62
SNX20-204ENST00000568993 TIMM17AQ99595 171 aa11.18□□□□□ -0.62
SNX20-204ENST00000568993 OVOL2Q9BRP0 275 aa11.18□□□□□ -0.62
SNX20-204ENST00000568993 MRPL35Q9NZE8 188 aaKnown RBP11.18□□□□□ -0.62
SNX20-204ENST00000568993 P0DMU3 169 aa11.17□□□□□ -0.62
SNX20-204ENST00000568993 FAM231AP0DMU4 169 aa11.17□□□□□ -0.62
SNX20-204ENST00000568993 FAM231CP0DMU5 169 aa11.17□□□□□ -0.62
SNX20-204ENST00000568993 HINT1P49773 126 aaPredicted RBP11.17□□□□□ -0.62
SNX20-204ENST00000568993 BOD1L2Q8IYS8 172 aa11.17□□□□□ -0.62
SNX20-204ENST00000568993 F8VRH5 84 aa11.16□□□□□ -0.62
SNX20-204ENST00000568993 RRN3P1Q2M238 152 aa11.16□□□□□ -0.62
SNX20-204ENST00000568993 TRAV4A0A0B4J268 109 aa11.16□□□□□ -0.62
SNX20-204ENST00000568993 PLNP26678 52 aa11.16□□□□□ -0.62
SNX20-204ENST00000568993 SMAGPQ0VAQ4 97 aa11.16□□□□□ -0.62
SNX20-204ENST00000568993 Q6ZTI0 123 aa11.16□□□□□ -0.62
SNX20-204ENST00000568993 RPL39P62891 51 aaKnown RBP11.15□□□□□ -0.62
SNX20-204ENST00000568993 C20orf203Q8NBC4 194 aa11.15□□□□□ -0.62
SNX20-204ENST00000568993 GEMIN7Q9H840 131 aaKnown RBP11.15□□□□□ -0.62
SNX20-204ENST00000568993 NOP10Q9NPE3 64 aaKnown RBP11.15□□□□□ -0.62
SNX20-204ENST00000568993 Q9UF83 564 aa11.14□□□□□ -0.63
SNX20-204ENST00000568993 PRSS29PA6NIE9 313 aa11.14□□□□□ -0.63
SNX20-204ENST00000568993 SIVA1O15304 175 aa11.14□□□□□ -0.63
SNX20-204ENST00000568993 FGF6P10767 208 aa11.14□□□□□ -0.63
SNX20-204ENST00000568993 SS18L2Q9UHA2 77 aa11.14□□□□□ -0.63
SNX20-204ENST00000568993 TAX1BP3O14907 124 aa11.13□□□□□ -0.63
SNX20-204ENST00000568993 DEFB104AQ8WTQ1 72 aa11.13□□□□□ -0.63
SNX20-204ENST00000568993 GTSF1LQ9H1H1 148 aa11.13□□□□□ -0.63
SNX20-204ENST00000568993 BAHCC1Q9P281 2608 aa11.13□□□□□ -0.63
SNX20-204ENST00000568993 KRTAP24-1Q3LI83 254 aa11.13□□□□□ -0.63
SNX20-204ENST00000568993 AMMECR1LQ6DCA0 310 aa11.13□□□□□ -0.63
SNX20-204ENST00000568993 TRBV10-1A0A0K0K1A3 114 aa11.12□□□□□ -0.63
SNX20-204ENST00000568993 PMVKQ15126 192 aa11.12□□□□□ -0.63
SNX20-204ENST00000568993 ZC2HC1BQ5TFG8 222 aa11.12□□□□□ -0.63
SNX20-204ENST00000568993 TP73-AS1Q9UF72 201 aa11.12□□□□□ -0.63
SNX20-204ENST00000568993 KIR2DL5BQ8NHK3 375 aa11.11□□□□□ -0.63
SNX20-204ENST00000568993 SMIM9A6NGZ8 99 aa11.11□□□□□ -0.63
SNX20-204ENST00000568993 PYGO1Q9Y3Y4 419 aa11.11□□□□□ -0.63
SNX20-204ENST00000568993 C2orf91Q6ZV80 131 aa11.09□□□□□ -0.63
SNX20-204ENST00000568993 TRBV7-3A0A075B6L6 115 aa11.09□□□□□ -0.63
SNX20-204ENST00000568993 IGKV2D-26A0A0A0MRZ7 120 aa11.09□□□□□ -0.63
SNX20-204ENST00000568993 K7EQD1 137 aa11.09□□□□□ -0.63
SNX20-204ENST00000568993 PAPPA-AS1Q5QFB9 102 aa11.09□□□□□ -0.63
SNX20-204ENST00000568993 CHCHD7Q9BUK0 85 aa11.09□□□□□ -0.63
SNX20-204ENST00000568993 GAGE7O76087 117 aa11.08□□□□□ -0.64
SNX20-204ENST00000568993 GAGE12FP0CL80 117 aa11.08□□□□□ -0.64
SNX20-204ENST00000568993 GAGE12GP0CL81 117 aa11.08□□□□□ -0.64
SNX20-204ENST00000568993 GAGE12IP0CL82 117 aa11.08□□□□□ -0.64
SNX20-204ENST00000568993 NMUP48645 174 aa11.08□□□□□ -0.64
SNX20-204ENST00000568993 X6R8D5 127 aa11.08□□□□□ -0.64
SNX20-204ENST00000568993 TRGV2A0A075B6R0 118 aa11.08□□□□□ -0.64
SNX20-204ENST00000568993 PCP2Q8IVA1 136 aa11.08□□□□□ -0.64
SNX20-204ENST00000568993 LINC00612Q8N6U2 182 aa11.08□□□□□ -0.64
SNX20-204ENST00000568993 SLC25A29Q8N8R3 303 aa11.08□□□□□ -0.64
SNX20-204ENST00000568993 TRRAPQ9Y4A5 3859 aa11.07□□□□□ -0.64
SNX20-204ENST00000568993 IGLV4-69A0A075B6H9 119 aa11.07□□□□□ -0.64
SNX20-204ENST00000568993 CYSRT1A8MQ03 144 aa11.07□□□□□ -0.64
SNX20-204ENST00000568993 APOC4P55056 127 aa11.07□□□□□ -0.64
SNX20-204ENST00000568993 RPL36AP83881 106 aaKnown RBP11.07□□□□□ -0.64
SNX20-204ENST00000568993 ZNRF2Q8NHG8 242 aa11.07□□□□□ -0.64
SNX20-204ENST00000568993 RPL36ALQ969Q0 106 aaKnown RBP11.07□□□□□ -0.64
SNX20-204ENST00000568993 VCX2Q9H322 139 aa11.07□□□□□ -0.64
SNX20-204ENST00000568993 TRBV6-4A0A1B0GX49 114 aa11.06□□□□□ -0.64
SNX20-204ENST00000568993 TCTAP57738 103 aa11.06□□□□□ -0.64
SNX20-204ENST00000568993 IGLV4-3A0A075B6K6 122 aa11.06□□□□□ -0.64
SNX20-204ENST00000568993 UBE2D3P61077 147 aa11.05□□□□□ -0.64
SNX20-204ENST00000568993 UBE2D2P62837 147 aa11.05□□□□□ -0.64
SNX20-204ENST00000568993 HSD52Q0P140 79 aa11.05□□□□□ -0.64
SNX20-204ENST00000568993 C12orf54Q6X4T0 127 aa11.05□□□□□ -0.64
SNX20-204ENST00000568993 DAZ4Q86SG3 579 aaKnown RBP11.05□□□□□ -0.64
SNX20-204ENST00000568993 FAM104AQ969W3 186 aa11.05□□□□□ -0.64
SNX20-204ENST00000568993 OPRPNQ99935 248 aaPredicted RBP11.05□□□□□ -0.64
SNX20-204ENST00000568993 DAZ3Q9NR90 486 aaKnown RBP11.05□□□□□ -0.64
SNX20-204ENST00000568993 SPANXA1Q9NS26 97 aa11.05□□□□□ -0.64
SNX20-204ENST00000568993 MPV17L2Q567V2 206 aa11.04□□□□□ -0.64
SNX20-204ENST00000568993 PHLDA1Q8WV24 401 aaPredicted RBP11.04□□□□□ -0.64
SNX20-204ENST00000568993 AMELXQ99217 191 aa11.04□□□□□ -0.64
SNX20-204ENST00000568993 IGHV3-38A0A0C4DH36 116 aa11.04□□□□□ -0.64
SNX20-204ENST00000568993 C11orf86A6NJI1 115 aa11.04□□□□□ -0.64
SNX20-204ENST00000568993 NFE4Q86UQ8 179 aa11.04□□□□□ -0.64
SNX20-204ENST00000568993 E9PLD3 99 aa11.03□□□□□ -0.64
SNX20-204ENST00000568993 FHL2Q14192 279 aa11.03□□□□□ -0.64
SNX20-204ENST00000568993 C3orf56Q8N813 242 aa11.03□□□□□ -0.64
SNX20-204ENST00000568993 HIGD1BQ9P298 99 aa11.03□□□□□ -0.64
SNX20-204ENST00000568993 UBE2D4Q9Y2X8 147 aa11.03□□□□□ -0.64
SNX20-204ENST00000568993 BVES-AS1Q5T3Y7 98 aa11.02□□□□□ -0.64
SNX20-204ENST00000568993 PRIMA1Q86XR5 153 aa11.02□□□□□ -0.64
SNX20-204ENST00000568993 SPATA25Q9BR10 227 aa11.02□□□□□ -0.64
SNX20-204ENST00000568993 TIMM21Q9BVV7 248 aa11.02□□□□□ -0.64
SNX20-204ENST00000568993 GAGE12HA6NDE8 117 aa11.02□□□□□ -0.65
SNX20-204ENST00000568993 TMEM97Q5BJF2 176 aa11.02□□□□□ -0.65
SNX20-204ENST00000568993 GTF2H5Q6ZYL4 71 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms