RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 MRPL18Q9H0U6 180 aaKnown RBP11.39□□□□□ -0.59
COMMD4-224ENST00000568877 TSHBP01222 138 aa11.38□□□□□ -0.59
COMMD4-224ENST00000568877 AMTP48728 403 aa11.38□□□□□ -0.59
COMMD4-224ENST00000568877 FABP9Q0Z7S8 132 aa11.38□□□□□ -0.59
COMMD4-224ENST00000568877 TTC32Q5I0X7 151 aa11.38□□□□□ -0.59
COMMD4-224ENST00000568877 Q6ZR54 194 aa11.38□□□□□ -0.59
COMMD4-224ENST00000568877 NIT1Q86X76 327 aa11.38□□□□□ -0.59
COMMD4-224ENST00000568877 CHCHD5Q9BSY4 110 aa11.38□□□□□ -0.59
COMMD4-224ENST00000568877 RYR3Q15413 4870 aa11.38□□□□□ -0.59
COMMD4-224ENST00000568877 TRAV9-2A0A087WT02 112 aa11.37□□□□□ -0.59
COMMD4-224ENST00000568877 TMEM262E9PQX1 116 aa11.37□□□□□ -0.59
COMMD4-224ENST00000568877 IGHV3-30P01768 117 aa11.37□□□□□ -0.59
COMMD4-224ENST00000568877 IGHV3-33P01772 117 aa11.37□□□□□ -0.59
COMMD4-224ENST00000568877 IGHV3-30-3P0DP02 117 aa11.37□□□□□ -0.59
COMMD4-224ENST00000568877 IGHV3-30-5P0DP03 117 aa11.37□□□□□ -0.59
COMMD4-224ENST00000568877 KIR2DL4Q99706 377 aa11.37□□□□□ -0.59
COMMD4-224ENST00000568877 TMEM243Q9BU79 118 aa11.37□□□□□ -0.59
COMMD4-224ENST00000568877 SMIM2Q9BVW6 85 aa11.37□□□□□ -0.59
COMMD4-224ENST00000568877 TRAPPC1Q9Y5R8 145 aa11.37□□□□□ -0.59
COMMD4-224ENST00000568877 PRSS47A8MTI9 375 aa11.36□□□□□ -0.59
COMMD4-224ENST00000568877 K7EP13 123 aa11.36□□□□□ -0.59
COMMD4-224ENST00000568877 ATP6V1G1O75348 118 aa11.36□□□□□ -0.59
COMMD4-224ENST00000568877 S100A1P23297 94 aa11.36□□□□□ -0.59
COMMD4-224ENST00000568877 KRTAP1-5Q9BYS1 174 aa11.36□□□□□ -0.59
COMMD4-224ENST00000568877 MAP1LC3AQ9H492 121 aa11.36□□□□□ -0.59
COMMD4-224ENST00000568877 A0A087WX48 190 aa11.35□□□□□ -0.59
COMMD4-224ENST00000568877 SCO1O75880 301 aa11.35□□□□□ -0.59
COMMD4-224ENST00000568877 FCER1GP30273 86 aa11.35□□□□□ -0.59
COMMD4-224ENST00000568877 PKIAP61925 76 aa11.35□□□□□ -0.59
COMMD4-224ENST00000568877 GAGE6Q13070 117 aa11.35□□□□□ -0.59
COMMD4-224ENST00000568877 Q8N3U1 123 aa11.35□□□□□ -0.59
COMMD4-224ENST00000568877 CHCHD7Q9BUK0 85 aa11.35□□□□□ -0.59
COMMD4-224ENST00000568877 DNAH2Q9P225 4427 aa11.34□□□□□ -0.59
COMMD4-224ENST00000568877 LOC389332A0A1B0GUA5 103 aa11.34□□□□□ -0.59
COMMD4-224ENST00000568877 C10orf126Q8N4M7 172 aa11.34□□□□□ -0.59
COMMD4-224ENST00000568877 ALKBH7Q9BT30 221 aaPredicted RBP11.34□□□□□ -0.59
COMMD4-224ENST00000568877 UBE2L6O14933 153 aa11.33□□□□□ -0.6
COMMD4-224ENST00000568877 TCAPO15273 167 aa11.33□□□□□ -0.6
COMMD4-224ENST00000568877 ESDP10768 282 aa11.33□□□□□ -0.6
COMMD4-224ENST00000568877 COLCA2A8K830 154 aa11.32□□□□□ -0.6
COMMD4-224ENST00000568877 MPV17L2Q567V2 206 aa11.32□□□□□ -0.6
COMMD4-224ENST00000568877 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.31□□□□□ -0.6
COMMD4-224ENST00000568877 IGKV2-29A2NJV5 120 aaPredicted RBP11.31□□□□□ -0.6
COMMD4-224ENST00000568877 IBA57-AS1B1ANH7 110 aa11.31□□□□□ -0.6
COMMD4-224ENST00000568877 H7C423 109 aa11.31□□□□□ -0.6
COMMD4-224ENST00000568877 RBX1P62877 108 aa11.31□□□□□ -0.6
COMMD4-224ENST00000568877 Q8N8P6 123 aa11.31□□□□□ -0.6
COMMD4-224ENST00000568877 BTF3P20290 206 aaKnown RBP11.3□□□□□ -0.6
COMMD4-224ENST00000568877 RAB5AP20339 215 aa11.3□□□□□ -0.6
COMMD4-224ENST00000568877 C1orf134Q5TEV5 83 aa11.3□□□□□ -0.6
COMMD4-224ENST00000568877 Q8N976 141 aa11.3□□□□□ -0.6
COMMD4-224ENST00000568877 A0A1B0GUV1 79 aa11.29□□□□□ -0.6
COMMD4-224ENST00000568877 IFI27P40305 119 aaPredicted RBP11.29□□□□□ -0.6
COMMD4-224ENST00000568877 C6orf223Q8N319 242 aa11.29□□□□□ -0.6
COMMD4-224ENST00000568877 NXT2Q9NPJ8 142 aaKnown RBP11.29□□□□□ -0.6
COMMD4-224ENST00000568877 KLK12Q9UKR0 248 aa11.29□□□□□ -0.6
COMMD4-224ENST00000568877 ANGP03950 147 aaKnown RBP11.28□□□□□ -0.6
COMMD4-224ENST00000568877 FGF6P10767 208 aa11.28□□□□□ -0.6
COMMD4-224ENST00000568877 LAGE3Q14657 143 aa11.28□□□□□ -0.6
COMMD4-224ENST00000568877 AMMECR1LQ6DCA0 310 aa11.28□□□□□ -0.6
COMMD4-224ENST00000568877 DNAH10Q8IVF4 4471 aa11.27□□□□□ -0.61
COMMD4-224ENST00000568877 K7EMI3 77 aa11.27□□□□□ -0.61
COMMD4-224ENST00000568877 C20orf203Q8NBC4 194 aa11.27□□□□□ -0.61
COMMD4-224ENST00000568877 PRSS3P2Q8NHM4 247 aa11.27□□□□□ -0.61
COMMD4-224ENST00000568877 IGLV4-60A0A075B6I1 120 aa11.26□□□□□ -0.61
COMMD4-224ENST00000568877 TRGC2P03986 189 aa11.26□□□□□ -0.61
COMMD4-224ENST00000568877 RNASEKQ6P5S7 137 aaKnown RBP11.26□□□□□ -0.61
COMMD4-224ENST00000568877 TMEM18Q96B42 140 aa11.26□□□□□ -0.61
COMMD4-224ENST00000568877 ZNF25P17030 456 aaPredicted RBP11.25□□□□□ -0.61
COMMD4-224ENST00000568877 ORMDL2Q53FV1 153 aa11.25□□□□□ -0.61
COMMD4-224ENST00000568877 MRPL52Q86TS9 123 aaKnown RBP11.25□□□□□ -0.61
COMMD4-224ENST00000568877 NFE4Q86UQ8 179 aa11.25□□□□□ -0.61
COMMD4-224ENST00000568877 C18orf32Q8TCD1 76 aa11.25□□□□□ -0.61
COMMD4-224ENST00000568877 UBE2WQ96B02 151 aa11.25□□□□□ -0.61
COMMD4-224ENST00000568877 Q9HAA7 133 aa11.25□□□□□ -0.61
COMMD4-224ENST00000568877 TRAV8-3A0A0A6YYJ7 113 aa11.24□□□□□ -0.61
COMMD4-224ENST00000568877 RTL8CO15255 209 aa11.24□□□□□ -0.61
COMMD4-224ENST00000568877 SMAGPQ0VAQ4 97 aa11.24□□□□□ -0.61
COMMD4-224ENST00000568877 LINC00269Q8N2A0 174 aa11.24□□□□□ -0.61
COMMD4-224ENST00000568877 TMEM101Q96IK0 257 aa11.24□□□□□ -0.61
COMMD4-224ENST00000568877 DNAH17Q9UFH2 4485 aa11.24□□□□□ -0.61
COMMD4-224ENST00000568877 CRPP02741 224 aa11.23□□□□□ -0.61
COMMD4-224ENST00000568877 RPL39P62891 51 aaKnown RBP11.23□□□□□ -0.61
COMMD4-224ENST00000568877 Q0VG73 95 aa11.23□□□□□ -0.61
COMMD4-224ENST00000568877 ENHOQ6UWT2 76 aa11.23□□□□□ -0.61
COMMD4-224ENST00000568877 OR5A1Q8NGJ0 315 aa11.23□□□□□ -0.61
COMMD4-224ENST00000568877 PRR34Q9NV39 138 aa11.23□□□□□ -0.61
COMMD4-224ENST00000568877 UBE2D4Q9Y2X8 147 aa11.23□□□□□ -0.61
COMMD4-224ENST00000568877 LINC01546A6NGU7 62 aa11.22□□□□□ -0.61
COMMD4-224ENST00000568877 DGAT2L7PQ6IED9 249 aa11.22□□□□□ -0.61
COMMD4-224ENST00000568877 Q6ZRN7 208 aaPredicted RBP11.22□□□□□ -0.61
COMMD4-224ENST00000568877 FA2HQ7L5A8 372 aa11.22□□□□□ -0.61
COMMD4-224ENST00000568877 TIMM21Q9BVV7 248 aa11.22□□□□□ -0.61
COMMD4-224ENST00000568877 CSDC2Q9Y534 153 aaKnown RBP11.22□□□□□ -0.61
COMMD4-224ENST00000568877 FRAS1Q86XX4 4008 aa11.21□□□□□ -0.61
COMMD4-224ENST00000568877 REG3AQ06141 175 aa11.21□□□□□ -0.61
COMMD4-224ENST00000568877 CLPSL2Q6UWE3 100 aa11.21□□□□□ -0.61
COMMD4-224ENST00000568877 CDC42SE2Q9NRR3 84 aa11.21□□□□□ -0.61
COMMD4-224ENST00000568877 G0S2P27469 103 aa11.2□□□□□ -0.62
COMMD4-224ENST00000568877 MIAQ16674 131 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms