RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 TSKUQ8WUA8 353 aa19.23■□□□□ 0.67
RAB40C-211ENST00000568586 TRAV26-2A0A0B4J265 109 aa19.21■□□□□ 0.67
RAB40C-211ENST00000568586 C14orf177Q52M58 125 aa19.21■□□□□ 0.67
RAB40C-211ENST00000568586 Q5VSD8 79 aa19.21■□□□□ 0.67
RAB40C-211ENST00000568586 C20orf203Q8NBC4 194 aa19.21■□□□□ 0.67
RAB40C-211ENST00000568586 COTL1Q14019 142 aa19.2■□□□□ 0.66
RAB40C-211ENST00000568586 FAM74A3Q4VXF1 159 aa19.2■□□□□ 0.66
RAB40C-211ENST00000568586 SMR3BP02814 79 aaPredicted RBP19.19■□□□□ 0.66
RAB40C-211ENST00000568586 HIGD1CA8MV81 97 aa19.18■□□□□ 0.66
RAB40C-211ENST00000568586 HAMPP81172 84 aa19.18■□□□□ 0.66
RAB40C-211ENST00000568586 REG3AQ06141 175 aa19.17■□□□□ 0.66
RAB40C-211ENST00000568586 RPL39LQ96EH5 51 aaKnown RBP19.17■□□□□ 0.66
RAB40C-211ENST00000568586 IGLV4-60A0A075B6I1 120 aa19.16■□□□□ 0.66
RAB40C-211ENST00000568586 A0A1B0GUT8 65 aa19.16■□□□□ 0.66
RAB40C-211ENST00000568586 AMTP48728 403 aa19.16■□□□□ 0.66
RAB40C-211ENST00000568586 V9GYV3 84 aa19.16■□□□□ 0.66
RAB40C-211ENST00000568586 TRAV8-4A0A0B4J246 113 aa19.15■□□□□ 0.66
RAB40C-211ENST00000568586 TRBV6-5A0A0K0K1A5 114 aa19.15■□□□□ 0.66
RAB40C-211ENST00000568586 C9JQL5 133 aa19.15■□□□□ 0.66
RAB40C-211ENST00000568586 USP17L23D6RBM5 183 aa19.15■□□□□ 0.66
RAB40C-211ENST00000568586 NCR2O95944 276 aa19.15■□□□□ 0.66
RAB40C-211ENST00000568586 TMEM241Q24JQ0 296 aa19.15■□□□□ 0.66
RAB40C-211ENST00000568586 CLPSL2Q6UWE3 100 aa19.15■□□□□ 0.66
RAB40C-211ENST00000568586 ISOC2Q96AB3 205 aa19.15■□□□□ 0.66
RAB40C-211ENST00000568586 BORCS7Q96B45 105 aa19.15■□□□□ 0.66
RAB40C-211ENST00000568586 TMEM191AQ9H0A3 160 aa19.15■□□□□ 0.66
RAB40C-211ENST00000568586 SMDT1Q9H4I9 107 aa19.15■□□□□ 0.66
RAB40C-211ENST00000568586 LINC01620Q4KN68 170 aa19.14■□□□□ 0.65
RAB40C-211ENST00000568586 DEFB104AQ8WTQ1 72 aa19.13■□□□□ 0.65
RAB40C-211ENST00000568586 SDHAF1A6NFY7 115 aa19.12■□□□□ 0.65
RAB40C-211ENST00000568586 FAM229AH3BQW9 127 aa19.12■□□□□ 0.65
RAB40C-211ENST00000568586 HLA-DQA1P01909 254 aa19.12■□□□□ 0.65
RAB40C-211ENST00000568586 RPL23P62829 140 aaKnown RBP19.12■□□□□ 0.65
RAB40C-211ENST00000568586 UBE2L6O14933 153 aa19.11■□□□□ 0.65
RAB40C-211ENST00000568586 H7C423 109 aa19.1■□□□□ 0.65
RAB40C-211ENST00000568586 PRSS1P07477 247 aa19.1■□□□□ 0.65
RAB40C-211ENST00000568586 INAFM2P0DMQ5 153 aa19.1■□□□□ 0.65
RAB40C-211ENST00000568586 SRSF3P84103 164 aaKnown RBP19.1■□□□□ 0.65
RAB40C-211ENST00000568586 PEA15Q15121 130 aa19.1■□□□□ 0.65
RAB40C-211ENST00000568586 DGAT2L7PQ6IED9 249 aa19.09■□□□□ 0.65
RAB40C-211ENST00000568586 NUP35Q8NFH5 326 aa19.09■□□□□ 0.65
RAB40C-211ENST00000568586 RNF185Q96GF1 192 aa19.09■□□□□ 0.65
RAB40C-211ENST00000568586 NAT8Q9UHE5 227 aa19.09■□□□□ 0.65
RAB40C-211ENST00000568586 IGLV10-54A0A075B6I4 117 aa19.07■□□□□ 0.64
RAB40C-211ENST00000568586 GAS8-AS1O95177 125 aa19.07■□□□□ 0.64
RAB40C-211ENST00000568586 RAB4AP20338 218 aa19.07■□□□□ 0.64
RAB40C-211ENST00000568586 MYCBP2O75592 4640 aa19.06■□□□□ 0.64
RAB40C-211ENST00000568586 I3L3M4 83 aa19.06■□□□□ 0.64
RAB40C-211ENST00000568586 CLRN3Q8NCR9 226 aa19.06■□□□□ 0.64
RAB40C-211ENST00000568586 MRAP2Q96G30 205 aa19.06■□□□□ 0.64
RAB40C-211ENST00000568586 APCSP02743 223 aa19.05■□□□□ 0.64
RAB40C-211ENST00000568586 RIGQ13278 110 aa19.05■□□□□ 0.64
RAB40C-211ENST00000568586 CHAC1Q9BUX1 264 aa19.05■□□□□ 0.64
RAB40C-211ENST00000568586 NAT8BQ9UHF3 227 aa19.05■□□□□ 0.64
RAB40C-211ENST00000568586 POLR2KP53803 58 aaKnown RBP19.04■□□□□ 0.64
RAB40C-211ENST00000568586 ADIRFQ15847 76 aa19.04■□□□□ 0.64
RAB40C-211ENST00000568586 SCXQ7RTU7 201 aa19.04■□□□□ 0.64
RAB40C-211ENST00000568586 SMIM27A0A1W2PRY6 76 aa19.03■□□□□ 0.64
RAB40C-211ENST00000568586 AMN1Q8IY45 258 aa19.03■□□□□ 0.64
RAB40C-211ENST00000568586 ST20Q9HBF5 79 aa19.03■□□□□ 0.64
RAB40C-211ENST00000568586 ESDP10768 282 aa19.02■□□□□ 0.64
RAB40C-211ENST00000568586 PMCHP20382 165 aa19.02■□□□□ 0.64
RAB40C-211ENST00000568586 C9orf163Q8N9P6 203 aa19.02■□□□□ 0.64
RAB40C-211ENST00000568586 TRBV27A0A0K0K1C4 114 aa19.01■□□□□ 0.63
RAB40C-211ENST00000568586 RPS10P46783 165 aaKnown RBP19.01■□□□□ 0.63
RAB40C-211ENST00000568586 IGKV2D-29A0A075B6S2 120 aaPredicted RBP19■□□□□ 0.63
RAB40C-211ENST00000568586 IGKV2-29A2NJV5 120 aaPredicted RBP19■□□□□ 0.63
RAB40C-211ENST00000568586 TSHBP01222 138 aa19■□□□□ 0.63
RAB40C-211ENST00000568586 FGF6P10767 208 aa19■□□□□ 0.63
RAB40C-211ENST00000568586 FLG2Q5D862 2391 aaPredicted RBP19■□□□□ 0.63
RAB40C-211ENST00000568586 ZNF25P17030 456 aaPredicted RBP18.99■□□□□ 0.63
RAB40C-211ENST00000568586 AMMECR1LQ6DCA0 310 aa18.99■□□□□ 0.63
RAB40C-211ENST00000568586 CNBPP62633 177 aaKnown RBP18.98■□□□□ 0.63
RAB40C-211ENST00000568586 CIRBP-AS1Q8TBR5 109 aa18.98■□□□□ 0.63
RAB40C-211ENST00000568586 LINC00528Q8N1L1 170 aa18.97■□□□□ 0.63
RAB40C-211ENST00000568586 DMBT1Q9UGM3 2413 aaPredicted RBP18.97■□□□□ 0.63
RAB40C-211ENST00000568586 PPP1R17O96001 155 aa18.96■□□□□ 0.63
RAB40C-211ENST00000568586 NRACQ8N912 160 aa18.96■□□□□ 0.63
RAB40C-211ENST00000568586 A0A1B0GW15 77 aa18.95■□□□□ 0.62
RAB40C-211ENST00000568586 PLA2G1BP04054 148 aaKnown RBP18.95■□□□□ 0.62
RAB40C-211ENST00000568586 FAM104BQ5XKR9 115 aa18.95■□□□□ 0.62
RAB40C-211ENST00000568586 RNASEKQ6P5S7 137 aaKnown RBP18.95■□□□□ 0.62
RAB40C-211ENST00000568586 TMEM242Q9NWH2 141 aa18.95■□□□□ 0.62
RAB40C-211ENST00000568586 HERC1Q15751 4861 aa18.95■□□□□ 0.62
RAB40C-211ENST00000568586 SDIM1Q6ZPB5 146 aa18.93■□□□□ 0.62
RAB40C-211ENST00000568586 MRPL52Q86TS9 123 aaKnown RBP18.93■□□□□ 0.62
RAB40C-211ENST00000568586 hDV102S1A0JD36 115 aa18.92■□□□□ 0.62
RAB40C-211ENST00000568586 GAGE12HA6NDE8 117 aa18.92■□□□□ 0.62
RAB40C-211ENST00000568586 VCYO14598 125 aa18.92■□□□□ 0.62
RAB40C-211ENST00000568586 OR5A1Q8NGJ0 315 aa18.92■□□□□ 0.62
RAB40C-211ENST00000568586 SMKR1H3BMG3 65 aa18.91■□□□□ 0.62
RAB40C-211ENST00000568586 MRPL51Q4U2R6 128 aaKnown RBP18.91■□□□□ 0.62
RAB40C-211ENST00000568586 CHCHD10Q8WYQ3 142 aaPredicted RBP18.91■□□□□ 0.62
RAB40C-211ENST00000568586 SLPIP03973 132 aa18.9■□□□□ 0.62
RAB40C-211ENST00000568586 SUMO2P61956 95 aaKnown RBP18.9■□□□□ 0.62
RAB40C-211ENST00000568586 C15orf56Q8N910 161 aa18.9■□□□□ 0.62
RAB40C-211ENST00000568586 IGKV3OR2-268A0A0C4DH90 116 aa18.89■□□□□ 0.61
RAB40C-211ENST00000568586 LINC00862A6NCI5 91 aa18.89■□□□□ 0.61
RAB40C-211ENST00000568586 CFAP161Q6P656 301 aa18.89■□□□□ 0.61
RAB40C-211ENST00000568586 TMEM101Q96IK0 257 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms