RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 LINC01619G3V211 115 aa12.62□□□□□ -0.39
VAC14-210ENST00000568548 A0A0J9YX75 114 aa12.61□□□□□ -0.39
VAC14-210ENST00000568548 PAPPA-AS1Q5QFB9 102 aa12.61□□□□□ -0.39
VAC14-210ENST00000568548 IGHV1OR15-1A0A075B7D0 117 aa12.61□□□□□ -0.39
VAC14-210ENST00000568548 TRBV27A0A0K0K1C4 114 aa12.61□□□□□ -0.39
VAC14-210ENST00000568548 CD28P10747 220 aa12.61□□□□□ -0.39
VAC14-210ENST00000568548 CRYBA4P53673 196 aa12.61□□□□□ -0.39
VAC14-210ENST00000568548 SNRPD3P62318 126 aaKnown RBP12.61□□□□□ -0.39
VAC14-210ENST00000568548 NTN5Q8WTR8 489 aaPredicted RBP12.61□□□□□ -0.39
VAC14-210ENST00000568548 TMEM141Q96I45 108 aa12.61□□□□□ -0.39
VAC14-210ENST00000568548 ZNF22P17026 224 aaPredicted RBP12.61□□□□□ -0.39
VAC14-210ENST00000568548 APRG1Q8IVJ8 170 aa12.61□□□□□ -0.39
VAC14-210ENST00000568548 NBPF19A0A087WUL8 3843 aa12.6□□□□□ -0.39
VAC14-210ENST00000568548 KHDC1LQ5JSQ8 128 aa12.6□□□□□ -0.39
VAC14-210ENST00000568548 NXPH4O95158 308 aa12.6□□□□□ -0.39
VAC14-210ENST00000568548 LYRM7Q5U5X0 104 aa12.6□□□□□ -0.39
VAC14-210ENST00000568548 Q6ZSN1 163 aa12.6□□□□□ -0.39
VAC14-210ENST00000568548 RNF183Q96D59 192 aa12.6□□□□□ -0.39
VAC14-210ENST00000568548 TIMM17AQ99595 171 aa12.6□□□□□ -0.39
VAC14-210ENST00000568548 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.59□□□□□ -0.39
VAC14-210ENST00000568548 IGKV2-29A2NJV5 120 aaPredicted RBP12.59□□□□□ -0.39
VAC14-210ENST00000568548 ZNF625Q96I27 306 aaPredicted RBP12.59□□□□□ -0.39
VAC14-210ENST00000568548 RHODO00212 210 aa12.58□□□□□ -0.39
VAC14-210ENST00000568548 MED14OSP0DP75 135 aa12.58□□□□□ -0.39
VAC14-210ENST00000568548 PSMB8P28062 276 aa12.58□□□□□ -0.39
VAC14-210ENST00000568548 C11orf44Q8N8P7 122 aa12.58□□□□□ -0.39
VAC14-210ENST00000568548 IGHV3OR16-12A0A075B7B8 117 aa12.58□□□□□ -0.4
VAC14-210ENST00000568548 LGALS9O00182 355 aa12.58□□□□□ -0.4
VAC14-210ENST00000568548 IGHV3-33P01772 117 aa12.58□□□□□ -0.4
VAC14-210ENST00000568548 DEFB131AP59861 70 aa12.58□□□□□ -0.4
VAC14-210ENST00000568548 KRTAP10-9P60411 292 aa12.58□□□□□ -0.4
VAC14-210ENST00000568548 IGLV4-3A0A075B6K6 122 aa12.58□□□□□ -0.4
VAC14-210ENST00000568548 TEX49A0A1B0GTD5 131 aa12.58□□□□□ -0.4
VAC14-210ENST00000568548 TMEM223A0PJW6 202 aa12.58□□□□□ -0.4
VAC14-210ENST00000568548 SLURP1P55000 103 aa12.58□□□□□ -0.4
VAC14-210ENST00000568548 C20orf203Q8NBC4 194 aa12.58□□□□□ -0.4
VAC14-210ENST00000568548 C9orf85Q96MD7 179 aa12.58□□□□□ -0.4
VAC14-210ENST00000568548 SETXQ7Z333 2677 aaKnown RBP12.57□□□□□ -0.4
VAC14-210ENST00000568548 TRBV20-1A0A075B6N2 111 aa12.57□□□□□ -0.4
VAC14-210ENST00000568548 LINC01356Q8N9X3 169 aa12.57□□□□□ -0.4
VAC14-210ENST00000568548 IGHV3-30-3P0DP02 117 aa12.56□□□□□ -0.4
VAC14-210ENST00000568548 HOXD3P31249 432 aaPredicted RBP12.56□□□□□ -0.4
VAC14-210ENST00000568548 ADAMTSL4-AS1Q5T5F5 129 aa12.56□□□□□ -0.4
VAC14-210ENST00000568548 TIMM21Q9BVV7 248 aa12.56□□□□□ -0.4
VAC14-210ENST00000568548 I3L3M4 83 aa12.55□□□□□ -0.4
VAC14-210ENST00000568548 CFHR3Q02985 330 aa12.55□□□□□ -0.4
VAC14-210ENST00000568548 POM121L12Q8N7R1 296 aa12.55□□□□□ -0.4
VAC14-210ENST00000568548 A0A096LNT2 108 aa12.55□□□□□ -0.4
VAC14-210ENST00000568548 A0A0J9YXY3 114 aa12.55□□□□□ -0.4
VAC14-210ENST00000568548 K7EQG2 157 aa12.55□□□□□ -0.4
VAC14-210ENST00000568548 LEPROTO15243 131 aa12.55□□□□□ -0.4
VAC14-210ENST00000568548 TCTEX1D4Q5JR98 221 aa12.55□□□□□ -0.4
VAC14-210ENST00000568548 CLEC2BQ92478 149 aa12.55□□□□□ -0.4
VAC14-210ENST00000568548 TMEM263Q8WUH6 116 aaKnown RBP12.55□□□□□ -0.4
VAC14-210ENST00000568548 ANAPC13Q9BS18 74 aa12.55□□□□□ -0.4
VAC14-210ENST00000568548 ATP6V0E2Q8NHE4 81 aa12.54□□□□□ -0.4
VAC14-210ENST00000568548 CRLF1O75462 422 aa12.53□□□□□ -0.4
VAC14-210ENST00000568548 TRIAP1O43715 76 aa12.53□□□□□ -0.4
VAC14-210ENST00000568548 TNFRSF18Q9Y5U5 241 aa12.53□□□□□ -0.4
VAC14-210ENST00000568548 H3BUA1 57 aa12.52□□□□□ -0.41
VAC14-210ENST00000568548 SS18L2Q9UHA2 77 aa12.52□□□□□ -0.41
VAC14-210ENST00000568548 NDUFA7O95182 113 aa12.51□□□□□ -0.41
VAC14-210ENST00000568548 FAM104AQ969W3 186 aa12.51□□□□□ -0.41
VAC14-210ENST00000568548 NDUFA12Q9UI09 145 aa12.51□□□□□ -0.41
VAC14-210ENST00000568548 FLNAP21333 2647 aaKnown RBP12.51□□□□□ -0.41
VAC14-210ENST00000568548 TRAV4A0A0B4J268 109 aa12.51□□□□□ -0.41
VAC14-210ENST00000568548 K7EMT4 169 aa12.51□□□□□ -0.41
VAC14-210ENST00000568548 TEX29Q8N6K0 151 aa12.51□□□□□ -0.41
VAC14-210ENST00000568548 GCN1Q92616 2671 aaKnown RBP12.51□□□□□ -0.41
VAC14-210ENST00000568548 TRBV6-5A0A0K0K1A5 114 aa12.51□□□□□ -0.41
VAC14-210ENST00000568548 LINC01620Q4KN68 170 aa12.51□□□□□ -0.41
VAC14-210ENST00000568548 NOTCH2Q04721 2471 aa12.51□□□□□ -0.41
VAC14-210ENST00000568548 APCP25054 2843 aa12.5□□□□□ -0.41
VAC14-210ENST00000568548 RBMY1BA6NDE4 496 aaKnown RBP12.5□□□□□ -0.41
VAC14-210ENST00000568548 RBMY1EA6NEQ0 496 aaKnown RBP12.5□□□□□ -0.41
VAC14-210ENST00000568548 RBMY1DP0C7P1 496 aaKnown RBP12.5□□□□□ -0.41
VAC14-210ENST00000568548 IGHV3-53P01767 116 aa12.5□□□□□ -0.41
VAC14-210ENST00000568548 ZFAND6Q6FIF0 208 aa12.5□□□□□ -0.41
VAC14-210ENST00000568548 NSUN5P1Q3KNT7 163 aa12.49□□□□□ -0.41
VAC14-210ENST00000568548 UBE2E2Q96LR5 201 aa12.49□□□□□ -0.41
VAC14-210ENST00000568548 TRBV7-9A0A0J9YWB2 115 aa12.49□□□□□ -0.41
VAC14-210ENST00000568548 RHOHQ15669 191 aa12.48□□□□□ -0.41
VAC14-210ENST00000568548 TENM4Q6N022 2769 aa12.48□□□□□ -0.41
VAC14-210ENST00000568548 ITPR3Q14573 2671 aa12.48□□□□□ -0.41
VAC14-210ENST00000568548 B5MCH6 92 aa12.48□□□□□ -0.41
VAC14-210ENST00000568548 J3QLI3 93 aa12.48□□□□□ -0.41
VAC14-210ENST00000568548 DEFB113Q30KQ7 82 aa12.48□□□□□ -0.41
VAC14-210ENST00000568548 TTC32Q5I0X7 151 aa12.48□□□□□ -0.41
VAC14-210ENST00000568548 C2orf82Q6UX34 121 aa12.48□□□□□ -0.41
VAC14-210ENST00000568548 LINC01587Q99440 93 aa12.48□□□□□ -0.41
VAC14-210ENST00000568548 LINC00467Q9BRT7 94 aa12.48□□□□□ -0.41
VAC14-210ENST00000568548 XCL2Q9UBD3 114 aa12.48□□□□□ -0.41
VAC14-210ENST00000568548 SNCGO76070 127 aa12.48□□□□□ -0.41
VAC14-210ENST00000568548 RPL32P62910 135 aaKnown RBP12.48□□□□□ -0.41
VAC14-210ENST00000568548 TMEM61Q8N0U2 210 aa12.48□□□□□ -0.41
VAC14-210ENST00000568548 HIVEP2P31629 2446 aa12.47□□□□□ -0.41
VAC14-210ENST00000568548 ATXN8Q156A1 80 aa12.47□□□□□ -0.41
VAC14-210ENST00000568548 CR1P17927 2039 aa12.46□□□□□ -0.41
VAC14-210ENST00000568548 A0A1W2PRX2 142 aa12.46□□□□□ -0.41
VAC14-210ENST00000568548 M0R2P5 195 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms