RNA–Protein interactions for RNA: ENST00000567470.1

RBFOX1-217, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2

Gene RBFOX1, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-217ENST00000567470 UBE2L6O14933 153 aa11.78□□□□□ -0.52
RBFOX1-217ENST00000567470 AMTP48728 403 aa11.78□□□□□ -0.52
RBFOX1-217ENST00000567470 COTL1Q14019 142 aa11.78□□□□□ -0.52
RBFOX1-217ENST00000567470 C20orf203Q8NBC4 194 aa11.78□□□□□ -0.52
RBFOX1-217ENST00000567470 GATCO43716 136 aaKnown RBP11.77□□□□□ -0.53
RBFOX1-217ENST00000567470 PRSS1P07477 247 aa11.77□□□□□ -0.53
RBFOX1-217ENST00000567470 KRTAP26-1Q6PEX3 210 aa11.77□□□□□ -0.53
RBFOX1-217ENST00000567470 SMIM15Q7Z3B0 74 aa11.77□□□□□ -0.53
RBFOX1-217ENST00000567470 GATD1Q8NB37 220 aa11.77□□□□□ -0.53
RBFOX1-217ENST00000567470 LYPD6BQ8NI32 183 aa11.77□□□□□ -0.53
RBFOX1-217ENST00000567470 IGLV4-60A0A075B6I1 120 aa11.76□□□□□ -0.53
RBFOX1-217ENST00000567470 A0A1B0GUV1 79 aa11.75□□□□□ -0.53
RBFOX1-217ENST00000567470 FAM231DQ6ZW35 169 aa11.75□□□□□ -0.53
RBFOX1-217ENST00000567470 CIRBP-AS1Q8TBR5 109 aa11.75□□□□□ -0.53
RBFOX1-217ENST00000567470 EIF5A2Q9GZV4 153 aaKnown RBP11.75□□□□□ -0.53
RBFOX1-217ENST00000567470 GFRA4Q9GZZ7 299 aa11.75□□□□□ -0.53
RBFOX1-217ENST00000567470 TRAV8-4A0A0B4J246 113 aa11.74□□□□□ -0.53
RBFOX1-217ENST00000567470 A8MWL6 223 aa11.74□□□□□ -0.53
RBFOX1-217ENST00000567470 FOXA3P55318 350 aaPredicted RBP11.74□□□□□ -0.53
RBFOX1-217ENST00000567470 RPL39LQ96EH5 51 aaKnown RBP11.74□□□□□ -0.53
RBFOX1-217ENST00000567470 SMIM7Q9BQ49 75 aa11.74□□□□□ -0.53
RBFOX1-217ENST00000567470 DGAT2L7PQ6IED9 249 aa11.73□□□□□ -0.53
RBFOX1-217ENST00000567470 CT83Q5H943 113 aa11.72□□□□□ -0.53
RBFOX1-217ENST00000567470 BORCS7Q96B45 105 aa11.72□□□□□ -0.53
RBFOX1-217ENST00000567470 TEX261Q6UWH6 196 aa11.71□□□□□ -0.53
RBFOX1-217ENST00000567470 CLRN3Q8NCR9 226 aa11.71□□□□□ -0.53
RBFOX1-217ENST00000567470 hDV102S1A0JD36 115 aa11.7□□□□□ -0.54
RBFOX1-217ENST00000567470 ZNF727A8MUV8 499 aa11.7□□□□□ -0.54
RBFOX1-217ENST00000567470 LINC01551Q86U37 167 aa11.7□□□□□ -0.54
RBFOX1-217ENST00000567470 FAM210AQ96ND0 272 aa11.7□□□□□ -0.54
RBFOX1-217ENST00000567470 IGKV3OR2-268A0A0C4DH90 116 aa11.69□□□□□ -0.54
RBFOX1-217ENST00000567470 SDHAF1A6NFY7 115 aa11.69□□□□□ -0.54
RBFOX1-217ENST00000567470 NCR2O95944 276 aa11.69□□□□□ -0.54
RBFOX1-217ENST00000567470 APCSP02743 223 aa11.69□□□□□ -0.54
RBFOX1-217ENST00000567470 AMMECR1LQ6DCA0 310 aa11.69□□□□□ -0.54
RBFOX1-217ENST00000567470 C9orf163Q8N9P6 203 aa11.69□□□□□ -0.54
RBFOX1-217ENST00000567470 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.68□□□□□ -0.54
RBFOX1-217ENST00000567470 IGKV2-29A2NJV5 120 aaPredicted RBP11.68□□□□□ -0.54
RBFOX1-217ENST00000567470 HIGD1CA8MV81 97 aa11.68□□□□□ -0.54
RBFOX1-217ENST00000567470 J3QL48 77 aa11.68□□□□□ -0.54
RBFOX1-217ENST00000567470 NDUFS6O75380 124 aaKnown RBP11.68□□□□□ -0.54
RBFOX1-217ENST00000567470 TSKUQ8WUA8 353 aa11.68□□□□□ -0.54
RBFOX1-217ENST00000567470 A0A1B0GUT8 65 aa11.67□□□□□ -0.54
RBFOX1-217ENST00000567470 SRP19P09132 144 aaKnown RBP11.67□□□□□ -0.54
RBFOX1-217ENST00000567470 RNASEKQ6P5S7 137 aaKnown RBP11.67□□□□□ -0.54
RBFOX1-217ENST00000567470 AP5S1Q9NUS5 200 aa11.67□□□□□ -0.54
RBFOX1-217ENST00000567470 A0A1B0GVG6 124 aa11.66□□□□□ -0.54
RBFOX1-217ENST00000567470 CNBPP62633 177 aaKnown RBP11.66□□□□□ -0.54
RBFOX1-217ENST00000567470 OSTCQ9NRP0 149 aa11.66□□□□□ -0.54
RBFOX1-217ENST00000567470 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.66□□□□□ -0.54
RBFOX1-217ENST00000567470 GAGE12HA6NDE8 117 aa11.65□□□□□ -0.54
RBFOX1-217ENST00000567470 I3L3M4 83 aa11.65□□□□□ -0.54
RBFOX1-217ENST00000567470 PMCHP20382 165 aa11.65□□□□□ -0.54
RBFOX1-217ENST00000567470 TRBV6-5A0A0K0K1A5 114 aa11.64□□□□□ -0.55
RBFOX1-217ENST00000567470 H7C423 109 aa11.64□□□□□ -0.55
RBFOX1-217ENST00000567470 GAS8-AS1O95177 125 aa11.64□□□□□ -0.55
RBFOX1-217ENST00000567470 FGF6P10767 208 aa11.64□□□□□ -0.55
RBFOX1-217ENST00000567470 KRTAP10-4P60372 401 aaPredicted RBP11.64□□□□□ -0.55
RBFOX1-217ENST00000567470 TMEM191AQ9H0A3 160 aa11.64□□□□□ -0.55
RBFOX1-217ENST00000567470 ST20Q9HBF5 79 aa11.64□□□□□ -0.55
RBFOX1-217ENST00000567470 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.63□□□□□ -0.55
RBFOX1-217ENST00000567470 FAM231BA6NCW3 169 aa11.63□□□□□ -0.55
RBFOX1-217ENST00000567470 SDIM1Q6ZPB5 146 aa11.63□□□□□ -0.55
RBFOX1-217ENST00000567470 TMEM242Q9NWH2 141 aa11.63□□□□□ -0.55
RBFOX1-217ENST00000567470 IGHV3-64A0A075B6Q5 118 aa11.62□□□□□ -0.55
RBFOX1-217ENST00000567470 PANO1I0J062 215 aa11.62□□□□□ -0.55
RBFOX1-217ENST00000567470 ZNF25P17030 456 aaPredicted RBP11.62□□□□□ -0.55
RBFOX1-217ENST00000567470 RPL37AP61513 92 aaKnown RBP11.62□□□□□ -0.55
RBFOX1-217ENST00000567470 C15orf56Q8N910 161 aa11.62□□□□□ -0.55
RBFOX1-217ENST00000567470 CHCHD10Q8WYQ3 142 aaPredicted RBP11.62□□□□□ -0.55
RBFOX1-217ENST00000567470 MRAP2Q96G30 205 aa11.62□□□□□ -0.55
RBFOX1-217ENST00000567470 BTF3L4Q96K17 158 aa11.62□□□□□ -0.55
RBFOX1-217ENST00000567470 V9GYV3 84 aa11.62□□□□□ -0.55
RBFOX1-217ENST00000567470 TSHBP01222 138 aa11.61□□□□□ -0.55
RBFOX1-217ENST00000567470 SLPIP03973 132 aa11.61□□□□□ -0.55
RBFOX1-217ENST00000567470 RPS10P46783 165 aaKnown RBP11.61□□□□□ -0.55
RBFOX1-217ENST00000567470 TMEM241Q24JQ0 296 aa11.61□□□□□ -0.55
RBFOX1-217ENST00000567470 CFAP161Q6P656 301 aa11.61□□□□□ -0.55
RBFOX1-217ENST00000567470 AMN1Q8IY45 258 aa11.61□□□□□ -0.55
RBFOX1-217ENST00000567470 ISOC2Q96AB3 205 aa11.61□□□□□ -0.55
RBFOX1-217ENST00000567470 RNF185Q96GF1 192 aa11.61□□□□□ -0.55
RBFOX1-217ENST00000567470 KRTAP29-1A8MX34 341 aaPredicted RBP11.6□□□□□ -0.55
RBFOX1-217ENST00000567470 RAB4AP20338 218 aa11.6□□□□□ -0.55
RBFOX1-217ENST00000567470 RIGQ13278 110 aa11.6□□□□□ -0.55
RBFOX1-217ENST00000567470 HIGD2BQ4VC39 106 aa11.6□□□□□ -0.55
RBFOX1-217ENST00000567470 FAM74A3Q4VXF1 159 aa11.6□□□□□ -0.55
RBFOX1-217ENST00000567470 NUP35Q8NFH5 326 aa11.6□□□□□ -0.55
RBFOX1-217ENST00000567470 TMEM101Q96IK0 257 aa11.6□□□□□ -0.55
RBFOX1-217ENST00000567470 RPL23P62829 140 aaKnown RBP11.59□□□□□ -0.55
RBFOX1-217ENST00000567470 ADIRFQ15847 76 aa11.59□□□□□ -0.55
RBFOX1-217ENST00000567470 OR5A1Q8NGJ0 315 aa11.59□□□□□ -0.55
RBFOX1-217ENST00000567470 SMKR1H3BMG3 65 aa11.58□□□□□ -0.56
RBFOX1-217ENST00000567470 ESDP10768 282 aa11.58□□□□□ -0.56
RBFOX1-217ENST00000567470 NAT8BQ9UHF3 227 aa11.58□□□□□ -0.56
RBFOX1-217ENST00000567470 TRBV27A0A0K0K1C4 114 aa11.57□□□□□ -0.56
RBFOX1-217ENST00000567470 C9JQL5 133 aa11.57□□□□□ -0.56
RBFOX1-217ENST00000567470 CHTF8P0CG12 524 aa11.57□□□□□ -0.56
RBFOX1-217ENST00000567470 XCL1P47992 114 aa11.57□□□□□ -0.56
RBFOX1-217ENST00000567470 CIRBPQ14011 172 aaKnown RBP11.57□□□□□ -0.56
RBFOX1-217ENST00000567470 NAT8Q9UHE5 227 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms