RNA–Protein interactions for RNA: ENST00000567377.5

COMMD4-218, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-218ENST00000567377 SRP19P09132 144 aaKnown RBP11.91□□□□□ -0.5
COMMD4-218ENST00000567377 Q5VSD8 79 aa11.91□□□□□ -0.5
COMMD4-218ENST00000567377 GATD1Q8NB37 220 aa11.91□□□□□ -0.5
COMMD4-218ENST00000567377 TSKUQ8WUA8 353 aa11.91□□□□□ -0.5
COMMD4-218ENST00000567377 NCR2O95944 276 aa11.9□□□□□ -0.5
COMMD4-218ENST00000567377 A0A1B0GUT8 65 aa11.89□□□□□ -0.51
COMMD4-218ENST00000567377 AMTP48728 403 aa11.89□□□□□ -0.51
COMMD4-218ENST00000567377 REG3AQ06141 175 aa11.89□□□□□ -0.51
COMMD4-218ENST00000567377 SMDT1Q9H4I9 107 aa11.89□□□□□ -0.51
COMMD4-218ENST00000567377 FAM30AQ9NZY2 134 aa11.89□□□□□ -0.51
COMMD4-218ENST00000567377 SMR3BP02814 79 aaPredicted RBP11.88□□□□□ -0.51
COMMD4-218ENST00000567377 TMEM241Q24JQ0 296 aa11.88□□□□□ -0.51
COMMD4-218ENST00000567377 HIGD1CA8MV81 97 aa11.87□□□□□ -0.51
COMMD4-218ENST00000567377 USP17L23D6RBM5 183 aa11.87□□□□□ -0.51
COMMD4-218ENST00000567377 H7C423 109 aa11.87□□□□□ -0.51
COMMD4-218ENST00000567377 HLA-DQA1P01909 254 aa11.87□□□□□ -0.51
COMMD4-218ENST00000567377 INAFM2P0DMQ5 153 aa11.87□□□□□ -0.51
COMMD4-218ENST00000567377 DGAT2L7PQ6IED9 249 aa11.87□□□□□ -0.51
COMMD4-218ENST00000567377 C20orf203Q8NBC4 194 aa11.87□□□□□ -0.51
COMMD4-218ENST00000567377 CLRN3Q8NCR9 226 aa11.87□□□□□ -0.51
COMMD4-218ENST00000567377 FAT1Q14517 4588 aa11.86□□□□□ -0.51
COMMD4-218ENST00000567377 TRAV26-2A0A0B4J265 109 aa11.86□□□□□ -0.51
COMMD4-218ENST00000567377 PEA15Q15121 130 aa11.86□□□□□ -0.51
COMMD4-218ENST00000567377 TMEM191AQ9H0A3 160 aa11.86□□□□□ -0.51
COMMD4-218ENST00000567377 DMBT1Q9UGM3 2413 aaPredicted RBP11.85□□□□□ -0.51
COMMD4-218ENST00000567377 TRBV6-5A0A0K0K1A5 114 aa11.85□□□□□ -0.51
COMMD4-218ENST00000567377 SDHAF1A6NFY7 115 aa11.85□□□□□ -0.51
COMMD4-218ENST00000567377 KRTAP26-1Q6PEX3 210 aa11.85□□□□□ -0.51
COMMD4-218ENST00000567377 CLPSL2Q6UWE3 100 aa11.85□□□□□ -0.51
COMMD4-218ENST00000567377 VPS13BQ7Z7G8 4022 aa11.84□□□□□ -0.51
COMMD4-218ENST00000567377 IGLV4-60A0A075B6I1 120 aa11.84□□□□□ -0.51
COMMD4-218ENST00000567377 I3L3M4 83 aa11.83□□□□□ -0.52
COMMD4-218ENST00000567377 APCSP02743 223 aa11.83□□□□□ -0.52
COMMD4-218ENST00000567377 RIGQ13278 110 aa11.83□□□□□ -0.52
COMMD4-218ENST00000567377 AMMECR1LQ6DCA0 310 aa11.83□□□□□ -0.52
COMMD4-218ENST00000567377 ISOC2Q96AB3 205 aa11.83□□□□□ -0.52
COMMD4-218ENST00000567377 RPL39LQ96EH5 51 aaKnown RBP11.83□□□□□ -0.52
COMMD4-218ENST00000567377 MRAP2Q96G30 205 aa11.83□□□□□ -0.52
COMMD4-218ENST00000567377 NAT8Q9UHE5 227 aa11.83□□□□□ -0.52
COMMD4-218ENST00000567377 V9GYV3 84 aa11.83□□□□□ -0.52
COMMD4-218ENST00000567377 DNAH8Q96JB1 4490 aa11.83□□□□□ -0.52
COMMD4-218ENST00000567377 PPP1R17O96001 155 aa11.82□□□□□ -0.52
COMMD4-218ENST00000567377 PLA2G1BP04054 148 aaKnown RBP11.82□□□□□ -0.52
COMMD4-218ENST00000567377 PMCHP20382 165 aa11.82□□□□□ -0.52
COMMD4-218ENST00000567377 HAMPP81172 84 aa11.82□□□□□ -0.52
COMMD4-218ENST00000567377 CHAC1Q9BUX1 264 aa11.82□□□□□ -0.52
COMMD4-218ENST00000567377 ST20Q9HBF5 79 aa11.82□□□□□ -0.52
COMMD4-218ENST00000567377 NAT8BQ9UHF3 227 aa11.82□□□□□ -0.52
COMMD4-218ENST00000567377 PRSS1P07477 247 aa11.81□□□□□ -0.52
COMMD4-218ENST00000567377 ZNF25P17030 456 aaPredicted RBP11.81□□□□□ -0.52
COMMD4-218ENST00000567377 RPL23P62829 140 aaKnown RBP11.81□□□□□ -0.52
COMMD4-218ENST00000567377 FLG2Q5D862 2391 aaPredicted RBP11.81□□□□□ -0.52
COMMD4-218ENST00000567377 IGLV10-54A0A075B6I4 117 aa11.8□□□□□ -0.52
COMMD4-218ENST00000567377 RAB4AP20338 218 aa11.8□□□□□ -0.52
COMMD4-218ENST00000567377 LINC01620Q4KN68 170 aa11.8□□□□□ -0.52
COMMD4-218ENST00000567377 NUP35Q8NFH5 326 aa11.8□□□□□ -0.52
COMMD4-218ENST00000567377 ADIRFQ15847 76 aa11.79□□□□□ -0.52
COMMD4-218ENST00000567377 CFAP161Q6P656 301 aa11.79□□□□□ -0.52
COMMD4-218ENST00000567377 C9orf163Q8N9P6 203 aa11.79□□□□□ -0.52
COMMD4-218ENST00000567377 DEFB104AQ8WTQ1 72 aa11.79□□□□□ -0.52
COMMD4-218ENST00000567377 A0A1B0GW15 77 aa11.78□□□□□ -0.52
COMMD4-218ENST00000567377 RNASEKQ6P5S7 137 aaKnown RBP11.78□□□□□ -0.52
COMMD4-218ENST00000567377 SCXQ7RTU7 201 aa11.78□□□□□ -0.52
COMMD4-218ENST00000567377 RNF185Q96GF1 192 aa11.78□□□□□ -0.52
COMMD4-218ENST00000567377 BTF3L4Q96K17 158 aa11.78□□□□□ -0.52
COMMD4-218ENST00000567377 AP5S1Q9NUS5 200 aa11.78□□□□□ -0.52
COMMD4-218ENST00000567377 TRBV27A0A0K0K1C4 114 aa11.77□□□□□ -0.53
COMMD4-218ENST00000567377 FGF6P10767 208 aa11.77□□□□□ -0.53
COMMD4-218ENST00000567377 POLR2KP53803 58 aaKnown RBP11.77□□□□□ -0.53
COMMD4-218ENST00000567377 CNBPP62633 177 aaKnown RBP11.77□□□□□ -0.53
COMMD4-218ENST00000567377 LINC00528Q8N1L1 170 aa11.77□□□□□ -0.53
COMMD4-218ENST00000567377 TMEM101Q96IK0 257 aa11.77□□□□□ -0.53
COMMD4-218ENST00000567377 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.76□□□□□ -0.53
COMMD4-218ENST00000567377 SMIM27A0A1W2PRY6 76 aa11.76□□□□□ -0.53
COMMD4-218ENST00000567377 C9JQL5 133 aa11.76□□□□□ -0.53
COMMD4-218ENST00000567377 SMAGPQ0VAQ4 97 aa11.76□□□□□ -0.53
COMMD4-218ENST00000567377 AMN1Q8IY45 258 aa11.76□□□□□ -0.53
COMMD4-218ENST00000567377 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.75□□□□□ -0.53
COMMD4-218ENST00000567377 hDV102S1A0JD36 115 aa11.75□□□□□ -0.53
COMMD4-218ENST00000567377 IGKV2-29A2NJV5 120 aaPredicted RBP11.75□□□□□ -0.53
COMMD4-218ENST00000567377 VCYO14598 125 aa11.75□□□□□ -0.53
COMMD4-218ENST00000567377 S100A8P05109 93 aa11.75□□□□□ -0.53
COMMD4-218ENST00000567377 ESDP10768 282 aa11.75□□□□□ -0.53
COMMD4-218ENST00000567377 CIRBP-AS1Q8TBR5 109 aa11.75□□□□□ -0.53
COMMD4-218ENST00000567377 LINC00862A6NCI5 91 aa11.74□□□□□ -0.53
COMMD4-218ENST00000567377 PPP1R2P9O14990 202 aa11.74□□□□□ -0.53
COMMD4-218ENST00000567377 TSHBP01222 138 aa11.74□□□□□ -0.53
COMMD4-218ENST00000567377 OR5A1Q8NGJ0 315 aa11.74□□□□□ -0.53
COMMD4-218ENST00000567377 SRSF3P84103 164 aaKnown RBP11.73□□□□□ -0.53
COMMD4-218ENST00000567377 FAM104BQ5XKR9 115 aa11.73□□□□□ -0.53
COMMD4-218ENST00000567377 MRPL52Q86TS9 123 aaKnown RBP11.73□□□□□ -0.53
COMMD4-218ENST00000567377 IGKV3OR2-268A0A0C4DH90 116 aa11.72□□□□□ -0.53
COMMD4-218ENST00000567377 GAGE12HA6NDE8 117 aa11.72□□□□□ -0.53
COMMD4-218ENST00000567377 GAS8-AS1O95177 125 aa11.72□□□□□ -0.53
COMMD4-218ENST00000567377 RPS10P46783 165 aaKnown RBP11.72□□□□□ -0.53
COMMD4-218ENST00000567377 SDIM1Q6ZPB5 146 aa11.72□□□□□ -0.53
COMMD4-218ENST00000567377 CHCHD10Q8WYQ3 142 aaPredicted RBP11.72□□□□□ -0.53
COMMD4-218ENST00000567377 KIR2DL4Q99706 377 aa11.72□□□□□ -0.53
COMMD4-218ENST00000567377 TMEM242Q9NWH2 141 aa11.72□□□□□ -0.53
COMMD4-218ENST00000567377 C7orf77A4D0Y5 90 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms