RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 MGPP08493 103 aa17.09■□□□□ 0.33
LINC00543-201ENST00000567234 RBMY1DP0C7P1 496 aaKnown RBP17.09■□□□□ 0.33
LINC00543-201ENST00000567234 UBE2D3P61077 147 aa17.09■□□□□ 0.33
LINC00543-201ENST00000567234 SUMO2P61956 95 aaKnown RBP17.09■□□□□ 0.33
LINC00543-201ENST00000567234 UBE2D2P62837 147 aa17.09■□□□□ 0.33
LINC00543-201ENST00000567234 TEN1Q86WV5 123 aa17.08■□□□□ 0.33
LINC00543-201ENST00000567234 ERG28Q9UKR5 140 aa17.08■□□□□ 0.33
LINC00543-201ENST00000567234 C2CD3Q4AC94 2353 aa17.08■□□□□ 0.32
LINC00543-201ENST00000567234 Q6ZUT4 128 aa17.07■□□□□ 0.32
LINC00543-201ENST00000567234 ADARB2-AS1A8MUL3 147 aa17.06■□□□□ 0.32
LINC00543-201ENST00000567234 RBMY1A1P0DJD3 496 aaKnown RBP17.06■□□□□ 0.32
LINC00543-201ENST00000567234 RBMY1CP0DJD4 496 aa17.06■□□□□ 0.32
LINC00543-201ENST00000567234 CMC4P56277 68 aaPredicted RBP17.06■□□□□ 0.32
LINC00543-201ENST00000567234 RBMY1FQ15415 496 aaKnown RBP17.06■□□□□ 0.32
LINC00543-201ENST00000567234 LINC00467Q9BRT7 94 aa17.06■□□□□ 0.32
LINC00543-201ENST00000567234 PGPEP1Q9NXJ5 209 aa17.06■□□□□ 0.32
LINC00543-201ENST00000567234 RPL32P62910 135 aaKnown RBP17.05■□□□□ 0.32
LINC00543-201ENST00000567234 ODF3L2Q3SX64 289 aa17.05■□□□□ 0.32
LINC00543-201ENST00000567234 PAPPA-AS1Q5QFB9 102 aa17.05■□□□□ 0.32
LINC00543-201ENST00000567234 TOMM6Q96B49 74 aa17.05■□□□□ 0.32
LINC00543-201ENST00000567234 JMJD1CQ15652 2540 aa17.05■□□□□ 0.32
LINC00543-201ENST00000567234 NEXN-AS1Q8NBZ9 246 aa17.03■□□□□ 0.32
LINC00543-201ENST00000567234 RPL39LQ96EH5 51 aaKnown RBP17.03■□□□□ 0.32
LINC00543-201ENST00000567234 SMCPP49901 116 aaPredicted RBP17.03■□□□□ 0.32
LINC00543-201ENST00000567234 INSL3P51460 131 aa17.03■□□□□ 0.32
LINC00543-201ENST00000567234 JPT2Q9H910 190 aa17.03■□□□□ 0.32
LINC00543-201ENST00000567234 NDUFA11Q86Y39 141 aa17.02■□□□□ 0.31
LINC00543-201ENST00000567234 PIK3CD-AS1Q5SR53 167 aa17.01■□□□□ 0.31
LINC00543-201ENST00000567234 SUMO4Q6EEV6 95 aa17.01■□□□□ 0.31
LINC00543-201ENST00000567234 INSP01308 110 aa17■□□□□ 0.31
LINC00543-201ENST00000567234 PTH2Q96A98 100 aa17■□□□□ 0.31
LINC00543-201ENST00000567234 FAM110AQ9BQ89 295 aa17■□□□□ 0.31
LINC00543-201ENST00000567234 A0A087WWL8 130 aa17■□□□□ 0.31
LINC00543-201ENST00000567234 IGLV1-51P01701 117 aa17■□□□□ 0.31
LINC00543-201ENST00000567234 CRYGDP07320 174 aa17■□□□□ 0.31
LINC00543-201ENST00000567234 ZNF876PQ49A33 203 aa17■□□□□ 0.31
LINC00543-201ENST00000567234 STHQ8IWL8 128 aa17■□□□□ 0.31
LINC00543-201ENST00000567234 LINC01600Q96MT4 127 aa16.99■□□□□ 0.31
LINC00543-201ENST00000567234 SCGB3A1Q96QR1 104 aa16.99■□□□□ 0.31
LINC00543-201ENST00000567234 TRBV6-5A0A0K0K1A5 114 aa16.98■□□□□ 0.31
LINC00543-201ENST00000567234 A8MWV9 139 aa16.98■□□□□ 0.31
LINC00543-201ENST00000567234 NSUN5P1Q3KNT7 163 aa16.98■□□□□ 0.31
LINC00543-201ENST00000567234 F5H697 171 aa16.98■□□□□ 0.31
LINC00543-201ENST00000567234 ZNF415Q09FC8 603 aa16.98■□□□□ 0.31
LINC00543-201ENST00000567234 TRPT1Q86TN4 253 aaKnown RBP16.98■□□□□ 0.31
LINC00543-201ENST00000567234 NFE4Q86UQ8 179 aa16.98■□□□□ 0.31
LINC00543-201ENST00000567234 POLR2KP53803 58 aaKnown RBP16.97■□□□□ 0.31
LINC00543-201ENST00000567234 HERVK_113P61574 105 aa16.97■□□□□ 0.31
LINC00543-201ENST00000567234 ZFAND6Q6FIF0 208 aa16.96■□□□□ 0.31
LINC00543-201ENST00000567234 PRADC1Q9BSG0 188 aa16.96■□□□□ 0.31
LINC00543-201ENST00000567234 MT-ATP8P03928 68 aa16.96■□□□□ 0.3
LINC00543-201ENST00000567234 XGP55808 180 aa16.96■□□□□ 0.3
LINC00543-201ENST00000567234 GAGE5Q13069 117 aa16.96■□□□□ 0.3
LINC00543-201ENST00000567234 GAGE6Q13070 117 aa16.96■□□□□ 0.3
LINC00543-201ENST00000567234 FAM74A4Q5TZK3 123 aa16.96■□□□□ 0.3
LINC00543-201ENST00000567234 LINC01587Q99440 93 aa16.96■□□□□ 0.3
LINC00543-201ENST00000567234 M0R2P5 195 aa16.95■□□□□ 0.3
LINC00543-201ENST00000567234 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.95■□□□□ 0.3
LINC00543-201ENST00000567234 ZNF815PA8K554 130 aa16.94■□□□□ 0.3
LINC00543-201ENST00000567234 M0QY20 66 aa16.94■□□□□ 0.3
LINC00543-201ENST00000567234 VCYO14598 125 aa16.94■□□□□ 0.3
LINC00543-201ENST00000567234 PSMB2P49721 201 aa16.94■□□□□ 0.3
LINC00543-201ENST00000567234 KRTAP10-3P60369 221 aa16.94■□□□□ 0.3
LINC00543-201ENST00000567234 EDA2RQ9HAV5 297 aa16.94■□□□□ 0.3
LINC00543-201ENST00000567234 HTN1P15515 57 aa16.93■□□□□ 0.3
LINC00543-201ENST00000567234 ZNF56Q15929 161 aa16.93■□□□□ 0.3
LINC00543-201ENST00000567234 BEAN1Q3B7T3 259 aa16.93■□□□□ 0.3
LINC00543-201ENST00000567234 SPXQ9BT56 116 aa16.93■□□□□ 0.3
LINC00543-201ENST00000567234 SRSF9Q13242 221 aaKnown RBP eCLIP16.93■□□□□ 0.3
LINC00543-201ENST00000567234 Q6Q795 121 aa16.93■□□□□ 0.3
LINC00543-201ENST00000567234 SCGB1D4Q6XE38 83 aa16.93■□□□□ 0.3
LINC00543-201ENST00000567234 CARD19Q96LW7 228 aa16.93■□□□□ 0.3
LINC00543-201ENST00000567234 TRBV27A0A0K0K1C4 114 aa16.92■□□□□ 0.3
LINC00543-201ENST00000567234 ANAPC13Q9BS18 74 aa16.92■□□□□ 0.3
LINC00543-201ENST00000567234 C11orf72Q8NBR9 251 aa16.91■□□□□ 0.3
LINC00543-201ENST00000567234 BAALCQ8WXS3 180 aa16.91■□□□□ 0.3
LINC00543-201ENST00000567234 CITED1Q99966 193 aa16.91■□□□□ 0.3
LINC00543-201ENST00000567234 KIR2DL4Q99706 377 aa16.91■□□□□ 0.3
LINC00543-201ENST00000567234 LOC107984156A0A0G2JMH3 177 aa16.9■□□□□ 0.3
LINC00543-201ENST00000567234 SDHAF1A6NFY7 115 aa16.9■□□□□ 0.3
LINC00543-201ENST00000567234 ARL17AQ8IVW1 177 aa16.9■□□□□ 0.3
LINC00543-201ENST00000567234 C10orf126Q8N4M7 172 aa16.9■□□□□ 0.3
LINC00543-201ENST00000567234 XCL2Q9UBD3 114 aa16.9■□□□□ 0.3
LINC00543-201ENST00000567234 C2orf66Q6UXQ4 117 aa16.89■□□□□ 0.29
LINC00543-201ENST00000567234 PF4P02776 101 aa16.88■□□□□ 0.29
LINC00543-201ENST00000567234 RNF183Q96D59 192 aa16.88■□□□□ 0.29
LINC00543-201ENST00000567234 C19orf73Q9NVV2 129 aa16.88■□□□□ 0.29
LINC00543-201ENST00000567234 A0A0J9YY99 117 aa16.87■□□□□ 0.29
LINC00543-201ENST00000567234 PRSS29PA6NIE9 313 aa16.87■□□□□ 0.29
LINC00543-201ENST00000567234 C1orf158Q8N1D5 194 aa16.87■□□□□ 0.29
LINC00543-201ENST00000567234 LINC00482Q8N8I6 264 aa16.87■□□□□ 0.29
LINC00543-201ENST00000567234 TMEM141Q96I45 108 aa16.87■□□□□ 0.29
LINC00543-201ENST00000567234 TENM1Q9UKZ4 2725 aa16.87■□□□□ 0.29
LINC00543-201ENST00000567234 RHODO00212 210 aa16.86■□□□□ 0.29
LINC00543-201ENST00000567234 ZFP2Q6ZN57 461 aa16.86■□□□□ 0.29
LINC00543-201ENST00000567234 NACAE9PAV3 2078 aa16.86■□□□□ 0.29
LINC00543-201ENST00000567234 SCGB1C2P0DMR2 95 aa16.86■□□□□ 0.29
LINC00543-201ENST00000567234 P0DMU3 169 aa16.86■□□□□ 0.29
LINC00543-201ENST00000567234 FAM231AP0DMU4 169 aa16.86■□□□□ 0.29
LINC00543-201ENST00000567234 FAM231CP0DMU5 169 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms