RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 TRAV26-2A0A0B4J265 109 aa6.68□□□□□ -1.34
GTF3C1-206ENST00000566779 GAGE12HA6NDE8 117 aa6.68□□□□□ -1.34
GTF3C1-206ENST00000566779 F2Z2F3 143 aa6.68□□□□□ -1.34
GTF3C1-206ENST00000566779 GATCO43716 136 aaKnown RBP6.68□□□□□ -1.34
GTF3C1-206ENST00000566779 RASL11AQ6T310 242 aa6.68□□□□□ -1.34
GTF3C1-206ENST00000566779 ATRAIDQ6UW56 229 aa6.68□□□□□ -1.34
GTF3C1-206ENST00000566779 NTM-AS1Q6ZSK4 140 aa6.68□□□□□ -1.34
GTF3C1-206ENST00000566779 IGHV1-24A0A0C4DH33 117 aa6.67□□□□□ -1.34
GTF3C1-206ENST00000566779 M0QY20 66 aa6.67□□□□□ -1.34
GTF3C1-206ENST00000566779 CTRLP40313 264 aa6.67□□□□□ -1.34
GTF3C1-206ENST00000566779 PKIAP61925 76 aa6.67□□□□□ -1.34
GTF3C1-206ENST00000566779 RBX1P62877 108 aa6.67□□□□□ -1.34
GTF3C1-206ENST00000566779 Q0VG73 95 aa6.67□□□□□ -1.34
GTF3C1-206ENST00000566779 TMEM97Q5BJF2 176 aa6.67□□□□□ -1.34
GTF3C1-206ENST00000566779 PGLYRP4Q96LB8 373 aa6.67□□□□□ -1.34
GTF3C1-206ENST00000566779 SMIM7Q9BQ49 75 aa6.67□□□□□ -1.34
GTF3C1-206ENST00000566779 IGLV10-54A0A075B6I4 117 aa6.66□□□□□ -1.34
GTF3C1-206ENST00000566779 IGKV3OR2-268A0A0C4DH90 116 aa6.66□□□□□ -1.34
GTF3C1-206ENST00000566779 TMEM250H0YL14 139 aa6.66□□□□□ -1.34
GTF3C1-206ENST00000566779 UBE2L6O14933 153 aa6.66□□□□□ -1.34
GTF3C1-206ENST00000566779 AMTP48728 403 aa6.66□□□□□ -1.34
GTF3C1-206ENST00000566779 ENHOQ6UWT2 76 aa6.66□□□□□ -1.34
GTF3C1-206ENST00000566779 SMIM15Q7Z3B0 74 aa6.66□□□□□ -1.34
GTF3C1-206ENST00000566779 LINC00269Q8N2A0 174 aa6.66□□□□□ -1.34
GTF3C1-206ENST00000566779 BORCS7Q96B45 105 aa6.66□□□□□ -1.34
GTF3C1-206ENST00000566779 TMEM243Q9BU79 118 aa6.66□□□□□ -1.34
GTF3C1-206ENST00000566779 TMEM70Q9BUB7 260 aa6.66□□□□□ -1.34
GTF3C1-206ENST00000566779 ZNF727A8MUV8 499 aa6.65□□□□□ -1.34
GTF3C1-206ENST00000566779 USP17L23D6RBM5 183 aa6.65□□□□□ -1.34
GTF3C1-206ENST00000566779 INAFM2P0DMQ5 153 aa6.65□□□□□ -1.34
GTF3C1-206ENST00000566779 FOXA3P55318 350 aaPredicted RBP6.65□□□□□ -1.34
GTF3C1-206ENST00000566779 COTL1Q14019 142 aa6.65□□□□□ -1.34
GTF3C1-206ENST00000566779 RPL39LQ96EH5 51 aaKnown RBP6.65□□□□□ -1.34
GTF3C1-206ENST00000566779 MIAQ16674 131 aa6.64□□□□□ -1.35
GTF3C1-206ENST00000566779 IQCJQ1A5X6 159 aa6.64□□□□□ -1.35
GTF3C1-206ENST00000566779 GTSF1Q8WW33 167 aa6.64□□□□□ -1.35
GTF3C1-206ENST00000566779 NIT2Q9NQR4 276 aa6.64□□□□□ -1.35
GTF3C1-206ENST00000566779 A8MWL6 223 aa6.63□□□□□ -1.35
GTF3C1-206ENST00000566779 REG3AQ06141 175 aa6.63□□□□□ -1.35
GTF3C1-206ENST00000566779 C14orf177Q52M58 125 aa6.63□□□□□ -1.35
GTF3C1-206ENST00000566779 AMMECR1LQ6DCA0 310 aa6.63□□□□□ -1.35
GTF3C1-206ENST00000566779 GATD1Q8NB37 220 aa6.63□□□□□ -1.35
GTF3C1-206ENST00000566779 FAM210AQ96ND0 272 aa6.63□□□□□ -1.35
GTF3C1-206ENST00000566779 FLG2Q5D862 2391 aaPredicted RBP6.62□□□□□ -1.35
GTF3C1-206ENST00000566779 SRP19P09132 144 aaKnown RBP6.62□□□□□ -1.35
GTF3C1-206ENST00000566779 ADIRFQ15847 76 aa6.62□□□□□ -1.35
GTF3C1-206ENST00000566779 DGAT2L7PQ6IED9 249 aa6.62□□□□□ -1.35
GTF3C1-206ENST00000566779 RNASEKQ6P5S7 137 aaKnown RBP6.62□□□□□ -1.35
GTF3C1-206ENST00000566779 LINC01551Q86U37 167 aa6.62□□□□□ -1.35
GTF3C1-206ENST00000566779 IGLV4-60A0A075B6I1 120 aa6.61□□□□□ -1.35
GTF3C1-206ENST00000566779 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.61□□□□□ -1.35
GTF3C1-206ENST00000566779 IGKV2-29A2NJV5 120 aaPredicted RBP6.61□□□□□ -1.35
GTF3C1-206ENST00000566779 APCSP02743 223 aa6.61□□□□□ -1.35
GTF3C1-206ENST00000566779 WDR73Q6P4I2 378 aa6.61□□□□□ -1.35
GTF3C1-206ENST00000566779 FAM231DQ6ZW35 169 aa6.61□□□□□ -1.35
GTF3C1-206ENST00000566779 C20orf203Q8NBC4 194 aa6.61□□□□□ -1.35
GTF3C1-206ENST00000566779 LYPD6BQ8NI32 183 aa6.61□□□□□ -1.35
GTF3C1-206ENST00000566779 CNFNQ9BYD5 112 aa6.61□□□□□ -1.35
GTF3C1-206ENST00000566779 GFRA4Q9GZZ7 299 aa6.61□□□□□ -1.35
GTF3C1-206ENST00000566779 hDV102S1A0JD36 115 aa6.6□□□□□ -1.35
GTF3C1-206ENST00000566779 HIGD1CA8MV81 97 aa6.6□□□□□ -1.35
GTF3C1-206ENST00000566779 NCR2O95944 276 aa6.6□□□□□ -1.35
GTF3C1-206ENST00000566779 SCXQ7RTU7 201 aa6.6□□□□□ -1.35
GTF3C1-206ENST00000566779 A0A1B0GUT8 65 aa6.59□□□□□ -1.35
GTF3C1-206ENST00000566779 SDHAF1A6NFY7 115 aa6.59□□□□□ -1.35
GTF3C1-206ENST00000566779 PRSS1P07477 247 aa6.59□□□□□ -1.35
GTF3C1-206ENST00000566779 PMCHP20382 165 aa6.59□□□□□ -1.35
GTF3C1-206ENST00000566779 TSKUQ8WUA8 353 aa6.59□□□□□ -1.35
GTF3C1-206ENST00000566779 PRR34Q9NV39 138 aa6.59□□□□□ -1.35
GTF3C1-206ENST00000566779 TMEM242Q9NWH2 141 aa6.59□□□□□ -1.35
GTF3C1-206ENST00000566779 PRSS47A8MTI9 375 aa6.58□□□□□ -1.36
GTF3C1-206ENST00000566779 SMKR1H3BMG3 65 aa6.58□□□□□ -1.36
GTF3C1-206ENST00000566779 GAS8-AS1O95177 125 aa6.58□□□□□ -1.36
GTF3C1-206ENST00000566779 TMEM241Q24JQ0 296 aa6.58□□□□□ -1.36
GTF3C1-206ENST00000566779 XP32Q5T750 250 aa6.58□□□□□ -1.36
GTF3C1-206ENST00000566779 TEX261Q6UWH6 196 aa6.58□□□□□ -1.36
GTF3C1-206ENST00000566779 Q6ZSA8 131 aa6.58□□□□□ -1.36
GTF3C1-206ENST00000566779 AMN1Q8IY45 258 aa6.58□□□□□ -1.36
GTF3C1-206ENST00000566779 ST20Q9HBF5 79 aa6.58□□□□□ -1.36
GTF3C1-206ENST00000566779 OSTCQ9NRP0 149 aa6.58□□□□□ -1.36
GTF3C1-206ENST00000566779 RPL23P62829 140 aaKnown RBP6.57□□□□□ -1.36
GTF3C1-206ENST00000566779 RIGQ13278 110 aa6.57□□□□□ -1.36
GTF3C1-206ENST00000566779 PEA15Q15121 130 aa6.57□□□□□ -1.36
GTF3C1-206ENST00000566779 ISOC2Q96AB3 205 aa6.57□□□□□ -1.36
GTF3C1-206ENST00000566779 NAT8Q9UHE5 227 aa6.57□□□□□ -1.36
GTF3C1-206ENST00000566779 V9GYV3 84 aa6.57□□□□□ -1.36
GTF3C1-206ENST00000566779 DMBT1Q9UGM3 2413 aaPredicted RBP6.56□□□□□ -1.36
GTF3C1-206ENST00000566779 C9JQL5 133 aa6.56□□□□□ -1.36
GTF3C1-206ENST00000566779 I3L3M4 83 aa6.56□□□□□ -1.36
GTF3C1-206ENST00000566779 FGF6P10767 208 aa6.56□□□□□ -1.36
GTF3C1-206ENST00000566779 RPS10P46783 165 aaKnown RBP6.56□□□□□ -1.36
GTF3C1-206ENST00000566779 CAMPP49913 170 aa6.56□□□□□ -1.36
GTF3C1-206ENST00000566779 HIGD2BQ4VC39 106 aa6.56□□□□□ -1.36
GTF3C1-206ENST00000566779 TMEM101Q96IK0 257 aa6.56□□□□□ -1.36
GTF3C1-206ENST00000566779 BTF3L4Q96K17 158 aa6.56□□□□□ -1.36
GTF3C1-206ENST00000566779 CHAC1Q9BUX1 264 aa6.56□□□□□ -1.36
GTF3C1-206ENST00000566779 TRAV8-4A0A0B4J246 113 aa6.55□□□□□ -1.36
GTF3C1-206ENST00000566779 A0A1B0GUV1 79 aa6.55□□□□□ -1.36
GTF3C1-206ENST00000566779 TSHBP01222 138 aa6.55□□□□□ -1.36
GTF3C1-206ENST00000566779 FCER1GP30273 86 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms