RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 LINC00467Q9BRT7 94 aa12.27□□□□□ -0.44
CMTM3-213ENST00000566756 VCX2Q9H322 139 aa12.27□□□□□ -0.44
CMTM3-213ENST00000566756 PEMTQ9UBM1 199 aa12.27□□□□□ -0.44
CMTM3-213ENST00000566756 NOTCH2Q04721 2471 aa12.27□□□□□ -0.44
CMTM3-213ENST00000566756 ANK3Q12955 4377 aaKnown RBP12.27□□□□□ -0.45
CMTM3-213ENST00000566756 HIVEP2P31629 2446 aa12.27□□□□□ -0.45
CMTM3-213ENST00000566756 GAGE12HA6NDE8 117 aa12.27□□□□□ -0.45
CMTM3-213ENST00000566756 APOMO95445 188 aa12.27□□□□□ -0.45
CMTM3-213ENST00000566756 LY6G6DO95868 133 aa12.27□□□□□ -0.45
CMTM3-213ENST00000566756 HILS1P60008 231 aa12.27□□□□□ -0.45
CMTM3-213ENST00000566756 C16orf95Q9H693 158 aa12.27□□□□□ -0.45
CMTM3-213ENST00000566756 TMEM238C9JI98 176 aa12.26□□□□□ -0.45
CMTM3-213ENST00000566756 C4orf3Q8WVX3 66 aa12.26□□□□□ -0.45
CMTM3-213ENST00000566756 SMR3AQ99954 134 aa12.26□□□□□ -0.45
CMTM3-213ENST00000566756 C1QTNF4Q9BXJ3 329 aa12.26□□□□□ -0.45
CMTM3-213ENST00000566756 PRO1854Q9UHT4 67 aa12.26□□□□□ -0.45
CMTM3-213ENST00000566756 MTORP42345 2549 aa12.26□□□□□ -0.45
CMTM3-213ENST00000566756 H3BMM0 161 aa12.25□□□□□ -0.45
CMTM3-213ENST00000566756 RBMY1A1P0DJD3 496 aaKnown RBP12.25□□□□□ -0.45
CMTM3-213ENST00000566756 RBMY1CP0DJD4 496 aa12.25□□□□□ -0.45
CMTM3-213ENST00000566756 RBMY1FQ15415 496 aaKnown RBP12.25□□□□□ -0.45
CMTM3-213ENST00000566756 DEFB104AQ8WTQ1 72 aa12.25□□□□□ -0.45
CMTM3-213ENST00000566756 TSSC4Q9Y5U2 329 aaPredicted RBP12.25□□□□□ -0.45
CMTM3-213ENST00000566756 LOC107984156A0A0G2JMH3 177 aa12.25□□□□□ -0.45
CMTM3-213ENST00000566756 M0R2P5 195 aa12.25□□□□□ -0.45
CMTM3-213ENST00000566756 ARL17AQ8IVW1 177 aa12.25□□□□□ -0.45
CMTM3-213ENST00000566756 OPRPNQ99935 248 aaPredicted RBP12.25□□□□□ -0.45
CMTM3-213ENST00000566756 MRPS36P82909 103 aaKnown RBP12.24□□□□□ -0.45
CMTM3-213ENST00000566756 SBSPONQ8IVN8 264 aa12.24□□□□□ -0.45
CMTM3-213ENST00000566756 A0A0B4J2C4 111 aa12.23□□□□□ -0.45
CMTM3-213ENST00000566756 PSMB2P49721 201 aa12.23□□□□□ -0.45
CMTM3-213ENST00000566756 SMCPP49901 116 aaPredicted RBP12.23□□□□□ -0.45
CMTM3-213ENST00000566756 ZNF415Q09FC8 603 aa12.23□□□□□ -0.45
CMTM3-213ENST00000566756 DEFB131AP59861 70 aa12.23□□□□□ -0.45
CMTM3-213ENST00000566756 FOXI1Q12951 378 aa12.23□□□□□ -0.45
CMTM3-213ENST00000566756 TNFRSF18Q9Y5U5 241 aa12.23□□□□□ -0.45
CMTM3-213ENST00000566756 A0A0J9YXV3 536 aa12.22□□□□□ -0.45
CMTM3-213ENST00000566756 KNCNA6PVL3 124 aa12.22□□□□□ -0.45
CMTM3-213ENST00000566756 DNAJC30Q96LL9 226 aa12.22□□□□□ -0.45
CMTM3-213ENST00000566756 SPANXA1Q9NS26 97 aa12.22□□□□□ -0.45
CMTM3-213ENST00000566756 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.21□□□□□ -0.45
CMTM3-213ENST00000566756 OTOGQ6ZRI0 2925 aa12.21□□□□□ -0.45
CMTM3-213ENST00000566756 M0QXV9 152 aa12.21□□□□□ -0.46
CMTM3-213ENST00000566756 CD28P10747 220 aa12.21□□□□□ -0.46
CMTM3-213ENST00000566756 AZU1P20160 251 aa12.21□□□□□ -0.46
CMTM3-213ENST00000566756 C18orf65Q6ZTR6 163 aa12.21□□□□□ -0.46
CMTM3-213ENST00000566756 LINC01006Q8NI28 216 aa12.21□□□□□ -0.46
CMTM3-213ENST00000566756 FAM104AQ969W3 186 aa12.21□□□□□ -0.46
CMTM3-213ENST00000566756 CLUHP3Q96NS8 147 aa12.21□□□□□ -0.46
CMTM3-213ENST00000566756 DUX3Q96PT4 197 aa12.21□□□□□ -0.46
CMTM3-213ENST00000566756 SPXQ9BT56 116 aa12.21□□□□□ -0.46
CMTM3-213ENST00000566756 NDUFA7O95182 113 aa12.2□□□□□ -0.46
CMTM3-213ENST00000566756 SLURP1P55000 103 aa12.2□□□□□ -0.46
CMTM3-213ENST00000566756 MTURNQ8N3F0 131 aa12.2□□□□□ -0.46
CMTM3-213ENST00000566756 A4D1N5 150 aa12.19□□□□□ -0.46
CMTM3-213ENST00000566756 RBMY1BA6NDE4 496 aaKnown RBP12.19□□□□□ -0.46
CMTM3-213ENST00000566756 RBMY1EA6NEQ0 496 aaKnown RBP12.19□□□□□ -0.46
CMTM3-213ENST00000566756 TCL1BO95988 128 aa12.19□□□□□ -0.46
CMTM3-213ENST00000566756 RBMY1DP0C7P1 496 aaKnown RBP12.19□□□□□ -0.46
CMTM3-213ENST00000566756 TEN1Q86WV5 123 aa12.19□□□□□ -0.46
CMTM3-213ENST00000566756 TMEM263Q8WUH6 116 aaKnown RBP12.19□□□□□ -0.46
CMTM3-213ENST00000566756 RAX2Q96IS3 184 aa12.19□□□□□ -0.46
CMTM3-213ENST00000566756 TIMM21Q9BVV7 248 aa12.19□□□□□ -0.46
CMTM3-213ENST00000566756 TINCRA0A1B0GVN0 87 aa12.18□□□□□ -0.46
CMTM3-213ENST00000566756 IGHV3-33P01772 117 aa12.18□□□□□ -0.46
CMTM3-213ENST00000566756 IGHV3-30-3P0DP02 117 aa12.18□□□□□ -0.46
CMTM3-213ENST00000566756 NF1P21359 2839 aa12.18□□□□□ -0.46
CMTM3-213ENST00000566756 DEFB136Q30KP8 78 aa12.18□□□□□ -0.46
CMTM3-213ENST00000566756 BEAN1Q3B7T3 259 aa12.18□□□□□ -0.46
CMTM3-213ENST00000566756 GTSF1LQ9H1H1 148 aa12.18□□□□□ -0.46
CMTM3-213ENST00000566756 A0A0J9YXY3 114 aa12.18□□□□□ -0.46
CMTM3-213ENST00000566756 TMEM61Q8N0U2 210 aa12.18□□□□□ -0.46
CMTM3-213ENST00000566756 PPDPFLQ8WWR9 84 aa12.18□□□□□ -0.46
CMTM3-213ENST00000566756 IGHV1-58A0A0C4DH39 117 aa12.17□□□□□ -0.46
CMTM3-213ENST00000566756 IGHV3-53P01767 116 aa12.17□□□□□ -0.46
CMTM3-213ENST00000566756 INSL3P51460 131 aa12.17□□□□□ -0.46
CMTM3-213ENST00000566756 KHDC1LQ5JSQ8 128 aa12.17□□□□□ -0.46
CMTM3-213ENST00000566756 CHCHD7Q9BUK0 85 aa12.17□□□□□ -0.46
CMTM3-213ENST00000566756 MAP6D1Q9H9H5 199 aa12.17□□□□□ -0.46
CMTM3-213ENST00000566756 MUSTN1Q8IVN3 82 aa12.16□□□□□ -0.46
CMTM3-213ENST00000566756 C11orf72Q8NBR9 251 aa12.16□□□□□ -0.46
CMTM3-213ENST00000566756 DYNLRB2Q8TF09 96 aa12.16□□□□□ -0.46
CMTM3-213ENST00000566756 ERG28Q9UKR5 140 aa12.16□□□□□ -0.46
CMTM3-213ENST00000566756 UBE2D4Q9Y2X8 147 aa12.16□□□□□ -0.46
CMTM3-213ENST00000566756 SPANXDQ9BXN6 97 aa12.16□□□□□ -0.46
CMTM3-213ENST00000566756 SPANXCQ9NY87 97 aa12.16□□□□□ -0.46
CMTM3-213ENST00000566756 RS1O15537 224 aa12.15□□□□□ -0.46
CMTM3-213ENST00000566756 INSP01308 110 aa12.15□□□□□ -0.46
CMTM3-213ENST00000566756 SCGB1C2P0DMR2 95 aa12.15□□□□□ -0.46
CMTM3-213ENST00000566756 PROK1P58294 105 aa12.15□□□□□ -0.46
CMTM3-213ENST00000566756 FHL3Q13643 280 aa12.15□□□□□ -0.46
CMTM3-213ENST00000566756 RNF183Q96D59 192 aa12.15□□□□□ -0.46
CMTM3-213ENST00000566756 IGHV3-73A0A0B4J1V6 119 aa12.14□□□□□ -0.47
CMTM3-213ENST00000566756 EIF4EBP3O60516 100 aaPredicted RBP12.14□□□□□ -0.47
CMTM3-213ENST00000566756 HTN1P15515 57 aa12.14□□□□□ -0.47
CMTM3-213ENST00000566756 SFTA2Q6UW10 78 aa12.14□□□□□ -0.47
CMTM3-213ENST00000566756 LINC01600Q96MT4 127 aa12.14□□□□□ -0.47
CMTM3-213ENST00000566756 LITAFQ99732 161 aa12.14□□□□□ -0.47
CMTM3-213ENST00000566756 TRAV25A0A0B4J276 109 aa12.14□□□□□ -0.47
CMTM3-213ENST00000566756 DEFB114Q30KQ6 69 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms