RNA–Protein interactions for RNA: ENST00000566398.1

CPNE7-208, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-208ENST00000566398 DEFB104AQ8WTQ1 72 aa12.46□□□□□ -0.41
CPNE7-208ENST00000566398 TSKUQ8WUA8 353 aa12.46□□□□□ -0.41
CPNE7-208ENST00000566398 OSTCQ9NRP0 149 aa12.46□□□□□ -0.41
CPNE7-208ENST00000566398 HIGD1CA8MV81 97 aa12.45□□□□□ -0.42
CPNE7-208ENST00000566398 UBE2L6O14933 153 aa12.45□□□□□ -0.42
CPNE7-208ENST00000566398 FAM74A3Q4VXF1 159 aa12.45□□□□□ -0.42
CPNE7-208ENST00000566398 GFRA4Q9GZZ7 299 aa12.45□□□□□ -0.42
CPNE7-208ENST00000566398 FAM30AQ9NZY2 134 aa12.45□□□□□ -0.42
CPNE7-208ENST00000566398 SMR3BP02814 79 aaPredicted RBP12.44□□□□□ -0.42
CPNE7-208ENST00000566398 REG3AQ06141 175 aa12.44□□□□□ -0.42
CPNE7-208ENST00000566398 RPL39LQ96EH5 51 aaKnown RBP12.44□□□□□ -0.42
CPNE7-208ENST00000566398 A0A1B0GUT8 65 aa12.43□□□□□ -0.42
CPNE7-208ENST00000566398 A0A1B0GUV1 79 aa12.43□□□□□ -0.42
CPNE7-208ENST00000566398 FAM231BA6NCW3 169 aa12.43□□□□□ -0.42
CPNE7-208ENST00000566398 C20orf203Q8NBC4 194 aa12.43□□□□□ -0.42
CPNE7-208ENST00000566398 USP17L23D6RBM5 183 aa12.42□□□□□ -0.42
CPNE7-208ENST00000566398 TMEM241Q24JQ0 296 aa12.42□□□□□ -0.42
CPNE7-208ENST00000566398 LINC01620Q4KN68 170 aa12.42□□□□□ -0.42
CPNE7-208ENST00000566398 Q6ZSA8 131 aa12.42□□□□□ -0.42
CPNE7-208ENST00000566398 ISOC2Q96AB3 205 aa12.42□□□□□ -0.42
CPNE7-208ENST00000566398 IGLV4-60A0A075B6I1 120 aa12.41□□□□□ -0.42
CPNE7-208ENST00000566398 PEA15Q15121 130 aa12.41□□□□□ -0.42
CPNE7-208ENST00000566398 V9GYV3 84 aa12.41□□□□□ -0.42
CPNE7-208ENST00000566398 VPS13BQ7Z7G8 4022 aa12.4□□□□□ -0.42
CPNE7-208ENST00000566398 IGLV10-54A0A075B6I4 117 aa12.4□□□□□ -0.42
CPNE7-208ENST00000566398 SDHAF1A6NFY7 115 aa12.4□□□□□ -0.42
CPNE7-208ENST00000566398 C9JQL5 133 aa12.4□□□□□ -0.42
CPNE7-208ENST00000566398 FAM229AH3BQW9 127 aa12.4□□□□□ -0.42
CPNE7-208ENST00000566398 NCR2O95944 276 aa12.4□□□□□ -0.42
CPNE7-208ENST00000566398 ADIRFQ15847 76 aa12.4□□□□□ -0.42
CPNE7-208ENST00000566398 TMEM191AQ9H0A3 160 aa12.4□□□□□ -0.42
CPNE7-208ENST00000566398 NAT8Q9UHE5 227 aa12.4□□□□□ -0.42
CPNE7-208ENST00000566398 TRAV8-4A0A0B4J246 113 aa12.39□□□□□ -0.43
CPNE7-208ENST00000566398 APCSP02743 223 aa12.39□□□□□ -0.43
CPNE7-208ENST00000566398 RPL23P62829 140 aaKnown RBP12.39□□□□□ -0.43
CPNE7-208ENST00000566398 KRTAP26-1Q6PEX3 210 aa12.38□□□□□ -0.43
CPNE7-208ENST00000566398 SMDT1Q9H4I9 107 aa12.38□□□□□ -0.43
CPNE7-208ENST00000566398 TRBV6-5A0A0K0K1A5 114 aa12.37□□□□□ -0.43
CPNE7-208ENST00000566398 INAFM2P0DMQ5 153 aa12.37□□□□□ -0.43
CPNE7-208ENST00000566398 SRSF3P84103 164 aaKnown RBP12.37□□□□□ -0.43
CPNE7-208ENST00000566398 RIGQ13278 110 aa12.37□□□□□ -0.43
CPNE7-208ENST00000566398 AMMECR1LQ6DCA0 310 aa12.37□□□□□ -0.43
CPNE7-208ENST00000566398 NUP35Q8NFH5 326 aa12.37□□□□□ -0.43
CPNE7-208ENST00000566398 I3L3M4 83 aa12.36□□□□□ -0.43
CPNE7-208ENST00000566398 PRSS1P07477 247 aa12.36□□□□□ -0.43
CPNE7-208ENST00000566398 PMCHP20382 165 aa12.36□□□□□ -0.43
CPNE7-208ENST00000566398 AMN1Q8IY45 258 aa12.36□□□□□ -0.43
CPNE7-208ENST00000566398 MRAP2Q96G30 205 aa12.36□□□□□ -0.43
CPNE7-208ENST00000566398 ST20Q9HBF5 79 aa12.36□□□□□ -0.43
CPNE7-208ENST00000566398 NAT8BQ9UHF3 227 aa12.36□□□□□ -0.43
CPNE7-208ENST00000566398 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.35□□□□□ -0.43
CPNE7-208ENST00000566398 IGKV2-29A2NJV5 120 aaPredicted RBP12.35□□□□□ -0.43
CPNE7-208ENST00000566398 RNF185Q96GF1 192 aa12.35□□□□□ -0.43
CPNE7-208ENST00000566398 H7C423 109 aa12.34□□□□□ -0.43
CPNE7-208ENST00000566398 GAS8-AS1O95177 125 aa12.34□□□□□ -0.43
CPNE7-208ENST00000566398 RAB4AP20338 218 aa12.34□□□□□ -0.43
CPNE7-208ENST00000566398 RNASEKQ6P5S7 137 aaKnown RBP12.34□□□□□ -0.43
CPNE7-208ENST00000566398 SCXQ7RTU7 201 aa12.34□□□□□ -0.43
CPNE7-208ENST00000566398 FGF6P10767 208 aa12.33□□□□□ -0.44
CPNE7-208ENST00000566398 DGAT2L7PQ6IED9 249 aa12.33□□□□□ -0.44
CPNE7-208ENST00000566398 CLRN3Q8NCR9 226 aa12.33□□□□□ -0.44
CPNE7-208ENST00000566398 CHAC1Q9BUX1 264 aa12.33□□□□□ -0.44
CPNE7-208ENST00000566398 TMEM242Q9NWH2 141 aa12.33□□□□□ -0.44
CPNE7-208ENST00000566398 IGKV3OR2-268A0A0C4DH90 116 aa12.32□□□□□ -0.44
CPNE7-208ENST00000566398 RPS10P46783 165 aaKnown RBP12.32□□□□□ -0.44
CPNE7-208ENST00000566398 SMIM27A0A1W2PRY6 76 aa12.31□□□□□ -0.44
CPNE7-208ENST00000566398 TSHBP01222 138 aa12.31□□□□□ -0.44
CPNE7-208ENST00000566398 ZNF25P17030 456 aaPredicted RBP12.31□□□□□ -0.44
CPNE7-208ENST00000566398 LINC00528Q8N1L1 170 aa12.31□□□□□ -0.44
CPNE7-208ENST00000566398 SRRM2Q9UQ35 2752 aaKnown RBP12.3□□□□□ -0.44
CPNE7-208ENST00000566398 TRBV27A0A0K0K1C4 114 aa12.3□□□□□ -0.44
CPNE7-208ENST00000566398 hDV102S1A0JD36 115 aa12.3□□□□□ -0.44
CPNE7-208ENST00000566398 PPP1R17O96001 155 aa12.3□□□□□ -0.44
CPNE7-208ENST00000566398 BTF3L4Q96K17 158 aa12.3□□□□□ -0.44
CPNE7-208ENST00000566398 GAGE12HA6NDE8 117 aa12.29□□□□□ -0.44
CPNE7-208ENST00000566398 SMKR1H3BMG3 65 aa12.29□□□□□ -0.44
CPNE7-208ENST00000566398 POLR2KP53803 58 aaKnown RBP12.29□□□□□ -0.44
CPNE7-208ENST00000566398 TMEM101Q96IK0 257 aa12.29□□□□□ -0.44
CPNE7-208ENST00000566398 A0A1B0GW15 77 aa12.28□□□□□ -0.44
CPNE7-208ENST00000566398 PLA2G1BP04054 148 aaKnown RBP12.28□□□□□ -0.44
CPNE7-208ENST00000566398 ESDP10768 282 aa12.28□□□□□ -0.44
CPNE7-208ENST00000566398 CAMPP49913 170 aa12.28□□□□□ -0.44
CPNE7-208ENST00000566398 C9orf163Q8N9P6 203 aa12.28□□□□□ -0.44
CPNE7-208ENST00000566398 CIRBP-AS1Q8TBR5 109 aa12.28□□□□□ -0.44
CPNE7-208ENST00000566398 AP5S1Q9NUS5 200 aa12.28□□□□□ -0.44
CPNE7-208ENST00000566398 C7orf77A4D0Y5 90 aa12.27□□□□□ -0.45
CPNE7-208ENST00000566398 VCYO14598 125 aa12.27□□□□□ -0.45
CPNE7-208ENST00000566398 RAB14P61106 215 aa12.27□□□□□ -0.45
CPNE7-208ENST00000566398 CNBPP62633 177 aaKnown RBP12.27□□□□□ -0.45
CPNE7-208ENST00000566398 FAM104BQ5XKR9 115 aa12.27□□□□□ -0.45
CPNE7-208ENST00000566398 NRACQ8N912 160 aa12.27□□□□□ -0.45
CPNE7-208ENST00000566398 OR5A1Q8NGJ0 315 aa12.27□□□□□ -0.45
CPNE7-208ENST00000566398 CHCHD10Q8WYQ3 142 aaPredicted RBP12.27□□□□□ -0.45
CPNE7-208ENST00000566398 MYCBP2O75592 4640 aa12.27□□□□□ -0.45
CPNE7-208ENST00000566398 FCER1GP30273 86 aa12.26□□□□□ -0.45
CPNE7-208ENST00000566398 SUMO2P61956 95 aaKnown RBP12.26□□□□□ -0.45
CPNE7-208ENST00000566398 MRPL51Q4U2R6 128 aaKnown RBP12.26□□□□□ -0.45
CPNE7-208ENST00000566398 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.25□□□□□ -0.45
CPNE7-208ENST00000566398 PPP1R2P9O14990 202 aa12.25□□□□□ -0.45
CPNE7-208ENST00000566398 S100A8P05109 93 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms