RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 LYSTQ99698 3801 aa12.02□□□□□ -0.49
RAB40C-210ENST00000566290 NACAE9PAV3 2078 aa12.01□□□□□ -0.49
RAB40C-210ENST00000566290 DNAH7Q8WXX0 4024 aa12.01□□□□□ -0.49
RAB40C-210ENST00000566290 F8VRH5 84 aa12.01□□□□□ -0.49
RAB40C-210ENST00000566290 DLEU1O43261 78 aa12.01□□□□□ -0.49
RAB40C-210ENST00000566290 RPL35AP18077 110 aaKnown RBP12.01□□□□□ -0.49
RAB40C-210ENST00000566290 CASC10Q5T4H9 136 aa12.01□□□□□ -0.49
RAB40C-210ENST00000566290 IGKCP01834 107 aa12□□□□□ -0.49
RAB40C-210ENST00000566290 APOC4P55056 127 aa12□□□□□ -0.49
RAB40C-210ENST00000566290 MAJINQ3KP22 176 aa12□□□□□ -0.49
RAB40C-210ENST00000566290 C20orf203Q8NBC4 194 aa12□□□□□ -0.49
RAB40C-210ENST00000566290 OR4C5Q8NGB2 326 aa12□□□□□ -0.49
RAB40C-210ENST00000566290 PYGO1Q9Y3Y4 419 aa12□□□□□ -0.49
RAB40C-210ENST00000566290 TNFRSF18Q9Y5U5 241 aa12□□□□□ -0.49
RAB40C-210ENST00000566290 hDV102S1A0JD36 115 aa11.99□□□□□ -0.49
RAB40C-210ENST00000566290 COX8AP10176 69 aa11.99□□□□□ -0.49
RAB40C-210ENST00000566290 PAPPA-AS1Q5QFB9 102 aa11.99□□□□□ -0.49
RAB40C-210ENST00000566290 ZMAT5Q9UDW3 170 aaKnown RBP11.99□□□□□ -0.49
RAB40C-210ENST00000566290 TP53TG1Q9Y2A0 90 aa11.99□□□□□ -0.49
RAB40C-210ENST00000566290 IGHV3OR16-12A0A075B7B8 117 aa11.98□□□□□ -0.49
RAB40C-210ENST00000566290 TRGV1A0A0A0MS02 117 aa11.98□□□□□ -0.49
RAB40C-210ENST00000566290 LCE6AA0A183 80 aa11.98□□□□□ -0.49
RAB40C-210ENST00000566290 H0Y8G0 127 aa11.98□□□□□ -0.49
RAB40C-210ENST00000566290 PRM2P04554 102 aa11.98□□□□□ -0.49
RAB40C-210ENST00000566290 SLC25A34Q6PIV7 304 aa11.98□□□□□ -0.49
RAB40C-210ENST00000566290 BAALCQ8WXS3 180 aa11.98□□□□□ -0.49
RAB40C-210ENST00000566290 DKK2Q9UBU2 259 aa11.98□□□□□ -0.49
RAB40C-210ENST00000566290 HHLA3Q9XRX5 114 aa11.98□□□□□ -0.49
RAB40C-210ENST00000566290 HUWE1Q7Z6Z7 4374 aaKnown RBP11.98□□□□□ -0.49
RAB40C-210ENST00000566290 M0R143 59 aa11.97□□□□□ -0.49
RAB40C-210ENST00000566290 HNRNPA3P51991 378 aaKnown RBP11.97□□□□□ -0.49
RAB40C-210ENST00000566290 Q6ZTI0 123 aa11.97□□□□□ -0.49
RAB40C-210ENST00000566290 C2orf88Q9BSF0 95 aa11.97□□□□□ -0.49
RAB40C-210ENST00000566290 TRBV6-4A0A1B0GX49 114 aa11.96□□□□□ -0.49
RAB40C-210ENST00000566290 A8MZ25 164 aa11.96□□□□□ -0.49
RAB40C-210ENST00000566290 K7EQD1 137 aa11.96□□□□□ -0.49
RAB40C-210ENST00000566290 P0DMU3 169 aa11.96□□□□□ -0.49
RAB40C-210ENST00000566290 FAM231AP0DMU4 169 aa11.96□□□□□ -0.49
RAB40C-210ENST00000566290 FAM231CP0DMU5 169 aa11.96□□□□□ -0.49
RAB40C-210ENST00000566290 MRPL35Q9NZE8 188 aaKnown RBP11.96□□□□□ -0.49
RAB40C-210ENST00000566290 X6R8D5 127 aa11.96□□□□□ -0.49
RAB40C-210ENST00000566290 SIVA1O15304 175 aa11.95□□□□□ -0.5
RAB40C-210ENST00000566290 NHLRC4P0CG21 123 aaPredicted RBP11.95□□□□□ -0.5
RAB40C-210ENST00000566290 PMVKQ15126 192 aa11.95□□□□□ -0.5
RAB40C-210ENST00000566290 Q6ZSN1 163 aa11.95□□□□□ -0.5
RAB40C-210ENST00000566290 NEGR1Q7Z3B1 354 aa11.95□□□□□ -0.5
RAB40C-210ENST00000566290 TIMM21Q9BVV7 248 aa11.95□□□□□ -0.5
RAB40C-210ENST00000566290 FGF6P10767 208 aa11.94□□□□□ -0.5
RAB40C-210ENST00000566290 ANKRD39Q53RE8 183 aa11.94□□□□□ -0.5
RAB40C-210ENST00000566290 BOD1L2Q8IYS8 172 aa11.94□□□□□ -0.5
RAB40C-210ENST00000566290 NOP10Q9NPE3 64 aaKnown RBP11.94□□□□□ -0.5
RAB40C-210ENST00000566290 SPANXA1Q9NS26 97 aa11.94□□□□□ -0.5
RAB40C-210ENST00000566290 CHTOPQ9Y3Y2 248 aaKnown RBP11.94□□□□□ -0.5
RAB40C-210ENST00000566290 CSMD3Q7Z407 3707 aa11.94□□□□□ -0.5
RAB40C-210ENST00000566290 TRBV7-3A0A075B6L6 115 aa11.93□□□□□ -0.5
RAB40C-210ENST00000566290 LYRM9A8MSI8 78 aa11.93□□□□□ -0.5
RAB40C-210ENST00000566290 RPL36AP83881 106 aaKnown RBP11.93□□□□□ -0.5
RAB40C-210ENST00000566290 DAZ4Q86SG3 579 aaKnown RBP11.93□□□□□ -0.5
RAB40C-210ENST00000566290 MUC7Q8TAX7 377 aa11.93□□□□□ -0.5
RAB40C-210ENST00000566290 RPL36ALQ969Q0 106 aaKnown RBP11.93□□□□□ -0.5
RAB40C-210ENST00000566290 ZNF479Q96JC4 524 aa11.93□□□□□ -0.5
RAB40C-210ENST00000566290 SNHG12Q9BXW3 62 aa11.93□□□□□ -0.5
RAB40C-210ENST00000566290 DAZ3Q9NR90 486 aaKnown RBP11.93□□□□□ -0.5
RAB40C-210ENST00000566290 IGHV3-73A0A0B4J1V6 119 aa11.92□□□□□ -0.5
RAB40C-210ENST00000566290 PRSS29PA6NIE9 313 aa11.92□□□□□ -0.5
RAB40C-210ENST00000566290 COTL1Q14019 142 aa11.92□□□□□ -0.5
RAB40C-210ENST00000566290 HERC2O95714 4834 aa11.92□□□□□ -0.5
RAB40C-210ENST00000566290 RPL39P62891 51 aaKnown RBP11.91□□□□□ -0.5
RAB40C-210ENST00000566290 SMAGPQ0VAQ4 97 aa11.91□□□□□ -0.5
RAB40C-210ENST00000566290 NFE4Q86UQ8 179 aa11.91□□□□□ -0.5
RAB40C-210ENST00000566290 CHCHD7Q9BUK0 85 aa11.91□□□□□ -0.5
RAB40C-210ENST00000566290 CST9LQ9H4G1 147 aa11.91□□□□□ -0.5
RAB40C-210ENST00000566290 UBE2D3P61077 147 aa11.9□□□□□ -0.5
RAB40C-210ENST00000566290 UBE2D2P62837 147 aa11.9□□□□□ -0.5
RAB40C-210ENST00000566290 ZC2HC1BQ5TFG8 222 aa11.9□□□□□ -0.5
RAB40C-210ENST00000566290 SBSPONQ8IVN8 264 aa11.9□□□□□ -0.5
RAB40C-210ENST00000566290 GTSF1LQ9H1H1 148 aa11.9□□□□□ -0.5
RAB40C-210ENST00000566290 STARD9Q9P2P6 4700 aa11.89□□□□□ -0.51
RAB40C-210ENST00000566290 TRGV2A0A075B6R0 118 aa11.89□□□□□ -0.51
RAB40C-210ENST00000566290 EREGO14944 169 aa11.89□□□□□ -0.51
RAB40C-210ENST00000566290 LINC00694P0DN24 101 aa11.89□□□□□ -0.51
RAB40C-210ENST00000566290 MIFP14174 115 aa11.89□□□□□ -0.51
RAB40C-210ENST00000566290 MRPS36P82909 103 aaKnown RBP11.89□□□□□ -0.51
RAB40C-210ENST00000566290 STPG4Q8N801 248 aa11.89□□□□□ -0.51
RAB40C-210ENST00000566290 SLC25A29Q8N8R3 303 aa11.89□□□□□ -0.51
RAB40C-210ENST00000566290 AMELXQ99217 191 aa11.89□□□□□ -0.51
RAB40C-210ENST00000566290 HIGD1BQ9P298 99 aa11.89□□□□□ -0.51
RAB40C-210ENST00000566290 CSDC2Q9Y534 153 aaKnown RBP11.89□□□□□ -0.51
RAB40C-210ENST00000566290 IGLV4-69A0A075B6H9 119 aa11.88□□□□□ -0.51
RAB40C-210ENST00000566290 IGLV4-3A0A075B6K6 122 aa11.88□□□□□ -0.51
RAB40C-210ENST00000566290 IGHV4-30-4P0DP06 118 aa11.88□□□□□ -0.51
RAB40C-210ENST00000566290 TMEM97Q5BJF2 176 aa11.88□□□□□ -0.51
RAB40C-210ENST00000566290 PCLOQ9Y6V0 5065 aa11.87□□□□□ -0.51
RAB40C-210ENST00000566290 GAGE12BA1L429 117 aa11.87□□□□□ -0.51
RAB40C-210ENST00000566290 C11orf86A6NJI1 115 aa11.87□□□□□ -0.51
RAB40C-210ENST00000566290 H7C423 109 aa11.87□□□□□ -0.51
RAB40C-210ENST00000566290 GAGE7O76087 117 aa11.87□□□□□ -0.51
RAB40C-210ENST00000566290 GAGE12FP0CL80 117 aa11.87□□□□□ -0.51
RAB40C-210ENST00000566290 GAGE12GP0CL81 117 aa11.87□□□□□ -0.51
RAB40C-210ENST00000566290 GAGE12IP0CL82 117 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms