RNA–Protein interactions for RNA: ENST00000566247.1

TRADD-205, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-205ENST00000566247 CDPF1Q6NVV7 123 aa12.06□□□□□ -0.48
TRADD-205ENST00000566247 MRPL54Q6P161 138 aaKnown RBP12.06□□□□□ -0.48
TRADD-205ENST00000566247 TRBV6-5A0A0K0K1A5 114 aa12.05□□□□□ -0.48
TRADD-205ENST00000566247 GAS8-AS1O95177 125 aa12.05□□□□□ -0.48
TRADD-205ENST00000566247 NCR2O95944 276 aa12.05□□□□□ -0.48
TRADD-205ENST00000566247 APCSP02743 223 aa12.05□□□□□ -0.48
TRADD-205ENST00000566247 FUSP35637 526 aaKnown RBP eCLIP12.05□□□□□ -0.48
TRADD-205ENST00000566247 HBBP68871 147 aa12.05□□□□□ -0.48
TRADD-205ENST00000566247 C1orf43Q9BWL3 253 aa12.05□□□□□ -0.48
TRADD-205ENST00000566247 DNAH11Q96DT5 4516 aa12.04□□□□□ -0.48
TRADD-205ENST00000566247 SMKR1H3BMG3 65 aa12.04□□□□□ -0.48
TRADD-205ENST00000566247 I3L3M4 83 aa12.04□□□□□ -0.48
TRADD-205ENST00000566247 CLPSL2Q6UWE3 100 aa12.04□□□□□ -0.48
TRADD-205ENST00000566247 ENHOQ6UWT2 76 aa12.04□□□□□ -0.48
TRADD-205ENST00000566247 ANAPC16Q96DE5 110 aa12.04□□□□□ -0.48
TRADD-205ENST00000566247 F8W036 122 aa12.03□□□□□ -0.48
TRADD-205ENST00000566247 PPP1R17O96001 155 aa12.03□□□□□ -0.48
TRADD-205ENST00000566247 RPS10P46783 165 aaKnown RBP12.03□□□□□ -0.48
TRADD-205ENST00000566247 FAM104BQ5XKR9 115 aa12.03□□□□□ -0.48
TRADD-205ENST00000566247 COMMD7Q86VX2 200 aa12.03□□□□□ -0.48
TRADD-205ENST00000566247 LINC00269Q8N2A0 174 aa12.03□□□□□ -0.48
TRADD-205ENST00000566247 Q8N814 137 aa12.03□□□□□ -0.48
TRADD-205ENST00000566247 TMEM218A2RU14 115 aa12.02□□□□□ -0.49
TRADD-205ENST00000566247 LECT2O14960 151 aa12.02□□□□□ -0.49
TRADD-205ENST00000566247 MIAQ16674 131 aa12.02□□□□□ -0.49
TRADD-205ENST00000566247 BAALCQ8WXS3 180 aa12.02□□□□□ -0.49
TRADD-205ENST00000566247 TMEM70Q9BUB7 260 aa12.02□□□□□ -0.49
TRADD-205ENST00000566247 DYNC1H1Q14204 4646 aaKnown RBP12.02□□□□□ -0.49
TRADD-205ENST00000566247 MRPL51Q4U2R6 128 aaKnown RBP12.01□□□□□ -0.49
TRADD-205ENST00000566247 AMMECR1LQ6DCA0 310 aa12.01□□□□□ -0.49
TRADD-205ENST00000566247 TMEM242Q9NWH2 141 aa12.01□□□□□ -0.49
TRADD-205ENST00000566247 IGLV5-52A0A0A0MRZ9 124 aa12□□□□□ -0.49
TRADD-205ENST00000566247 A0A1B0GUV1 79 aa12□□□□□ -0.49
TRADD-205ENST00000566247 A0A1B0GXF2 115 aa12□□□□□ -0.49
TRADD-205ENST00000566247 CKS2P33552 79 aa12□□□□□ -0.49
TRADD-205ENST00000566247 ATP5L2Q7Z4Y8 100 aa12□□□□□ -0.49
TRADD-205ENST00000566247 MAPKAPK5-AS1Q8N8E1 139 aa12□□□□□ -0.49
TRADD-205ENST00000566247 C20orf203Q8NBC4 194 aa12□□□□□ -0.49
TRADD-205ENST00000566247 NTN5Q8WTR8 489 aaPredicted RBP12□□□□□ -0.49
TRADD-205ENST00000566247 PRR34Q9NV39 138 aa12□□□□□ -0.49
TRADD-205ENST00000566247 IGLV4-60A0A075B6I1 120 aa11.99□□□□□ -0.49
TRADD-205ENST00000566247 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.99□□□□□ -0.49
TRADD-205ENST00000566247 IGKV2-29A2NJV5 120 aaPredicted RBP11.99□□□□□ -0.49
TRADD-205ENST00000566247 ADCYAP1P18509 176 aa11.99□□□□□ -0.49
TRADD-205ENST00000566247 REG3AQ06141 175 aa11.99□□□□□ -0.49
TRADD-205ENST00000566247 WFDC2Q14508 124 aa11.99□□□□□ -0.49
TRADD-205ENST00000566247 TRBV27A0A0K0K1C4 114 aa11.98□□□□□ -0.49
TRADD-205ENST00000566247 LINC00862A6NCI5 91 aa11.98□□□□□ -0.49
TRADD-205ENST00000566247 H7C423 109 aa11.98□□□□□ -0.49
TRADD-205ENST00000566247 VCYO14598 125 aa11.98□□□□□ -0.49
TRADD-205ENST00000566247 TSHBP01222 138 aa11.98□□□□□ -0.49
TRADD-205ENST00000566247 HLA-DQA1P01909 254 aa11.98□□□□□ -0.49
TRADD-205ENST00000566247 POLR2KP53803 58 aaKnown RBP11.98□□□□□ -0.49
TRADD-205ENST00000566247 SUMO2P61956 95 aaKnown RBP11.98□□□□□ -0.49
TRADD-205ENST00000566247 RNASEKQ6P5S7 137 aaKnown RBP11.98□□□□□ -0.49
TRADD-205ENST00000566247 NRACQ8N912 160 aa11.98□□□□□ -0.49
TRADD-205ENST00000566247 FCER1GP30273 86 aa11.97□□□□□ -0.49
TRADD-205ENST00000566247 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.96□□□□□ -0.49
TRADD-205ENST00000566247 D6R8Y8 96 aa11.96□□□□□ -0.49
TRADD-205ENST00000566247 CDK2AP2O75956 126 aa11.96□□□□□ -0.49
TRADD-205ENST00000566247 FGF6P10767 208 aa11.96□□□□□ -0.49
TRADD-205ENST00000566247 GCSHP23434 173 aa11.96□□□□□ -0.49
TRADD-205ENST00000566247 BTF3L4Q96K17 158 aa11.96□□□□□ -0.49
TRADD-205ENST00000566247 KIR2DL4Q99706 377 aa11.96□□□□□ -0.49
TRADD-205ENST00000566247 SEC11CQ9BY50 192 aa11.96□□□□□ -0.49
TRADD-205ENST00000566247 KIAA1109Q2LD37 5005 aa11.96□□□□□ -0.5
TRADD-205ENST00000566247 IGLV10-54A0A075B6I4 117 aa11.95□□□□□ -0.5
TRADD-205ENST00000566247 TMEM101Q96IK0 257 aa11.95□□□□□ -0.5
TRADD-205ENST00000566247 TRAV8-4A0A0B4J246 113 aa11.94□□□□□ -0.5
TRADD-205ENST00000566247 IGKV3OR2-268A0A0C4DH90 116 aa11.94□□□□□ -0.5
TRADD-205ENST00000566247 PPBPP02775 128 aa11.94□□□□□ -0.5
TRADD-205ENST00000566247 C20orf78Q9BR46 151 aa11.94□□□□□ -0.5
TRADD-205ENST00000566247 C7orf77A4D0Y5 90 aa11.93□□□□□ -0.5
TRADD-205ENST00000566247 TNFRSF6BO95407 300 aa11.93□□□□□ -0.5
TRADD-205ENST00000566247 ESDP10768 282 aa11.93□□□□□ -0.5
TRADD-205ENST00000566247 ZNF25P17030 456 aaPredicted RBP11.93□□□□□ -0.5
TRADD-205ENST00000566247 C14orf177Q52M58 125 aa11.93□□□□□ -0.5
TRADD-205ENST00000566247 CTDSP1Q9GZU7 261 aa11.93□□□□□ -0.5
TRADD-205ENST00000566247 TRBV24-1A0A075B6N3 115 aa11.92□□□□□ -0.5
TRADD-205ENST00000566247 KRTAP10-1P60331 282 aa11.92□□□□□ -0.5
TRADD-205ENST00000566247 ORMDL3Q8N138 153 aa11.92□□□□□ -0.5
TRADD-205ENST00000566247 OR5A1Q8NGJ0 315 aa11.92□□□□□ -0.5
TRADD-205ENST00000566247 IMMP2LQ96T52 175 aa11.92□□□□□ -0.5
TRADD-205ENST00000566247 HERC2O95714 4834 aa11.92□□□□□ -0.5
TRADD-205ENST00000566247 USP17L23D6RBM5 183 aa11.91□□□□□ -0.5
TRADD-205ENST00000566247 NPYP01303 97 aa11.91□□□□□ -0.5
TRADD-205ENST00000566247 TMEM136Q6ZRR5 245 aa11.91□□□□□ -0.5
TRADD-205ENST00000566247 PHOX2AO14813 284 aa11.9□□□□□ -0.5
TRADD-205ENST00000566247 TCAPO15273 167 aa11.9□□□□□ -0.5
TRADD-205ENST00000566247 SMAGPQ0VAQ4 97 aa11.9□□□□□ -0.5
TRADD-205ENST00000566247 PRELID3AQ96N28 172 aa11.9□□□□□ -0.5
TRADD-205ENST00000566247 SMIM2Q9BVW6 85 aa11.9□□□□□ -0.5
TRADD-205ENST00000566247 LRP1BQ9NZR2 4599 aa11.9□□□□□ -0.5
TRADD-205ENST00000566247 S100PP25815 95 aa11.89□□□□□ -0.51
TRADD-205ENST00000566247 RPL32P62910 135 aaKnown RBP11.89□□□□□ -0.51
TRADD-205ENST00000566247 DGAT2L7PQ6IED9 249 aa11.89□□□□□ -0.51
TRADD-205ENST00000566247 DNAH5Q8TE73 4624 aa11.88□□□□□ -0.51
TRADD-205ENST00000566247 KRTAP26-1Q6PEX3 210 aa11.88□□□□□ -0.51
TRADD-205ENST00000566247 MRPL52Q86TS9 123 aaKnown RBP11.88□□□□□ -0.51
TRADD-205ENST00000566247 TMEM18Q96B42 140 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms