RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 OSTCQ9NRP0 149 aa11.01□□□□□ -0.65
USB1-211ENST00000565662 HLA-DQA1P01909 254 aa11□□□□□ -0.65
USB1-211ENST00000565662 REG3AQ06141 175 aa11□□□□□ -0.65
USB1-211ENST00000565662 WFDC2Q14508 124 aa11□□□□□ -0.65
USB1-211ENST00000565662 DGAT2L7PQ6IED9 249 aa11□□□□□ -0.65
USB1-211ENST00000565662 LINC00269Q8N2A0 174 aa11□□□□□ -0.65
USB1-211ENST00000565662 A0A1B0GUT8 65 aa10.99□□□□□ -0.65
USB1-211ENST00000565662 PPP1R17O96001 155 aa10.99□□□□□ -0.65
USB1-211ENST00000565662 PLA2G1BP04054 148 aaKnown RBP10.99□□□□□ -0.65
USB1-211ENST00000565662 GTSF1Q8WW33 167 aa10.99□□□□□ -0.65
USB1-211ENST00000565662 APCSP02743 223 aa10.98□□□□□ -0.65
USB1-211ENST00000565662 ZNF25P17030 456 aaPredicted RBP10.98□□□□□ -0.65
USB1-211ENST00000565662 GATD1Q8NB37 220 aa10.98□□□□□ -0.65
USB1-211ENST00000565662 TRBV6-5A0A0K0K1A5 114 aa10.97□□□□□ -0.65
USB1-211ENST00000565662 HIGD1CA8MV81 97 aa10.97□□□□□ -0.65
USB1-211ENST00000565662 INAFM2P0DMQ5 153 aa10.97□□□□□ -0.65
USB1-211ENST00000565662 SMAGPQ0VAQ4 97 aa10.97□□□□□ -0.65
USB1-211ENST00000565662 TMEM191AQ9H0A3 160 aa10.97□□□□□ -0.65
USB1-211ENST00000565662 USP17L23D6RBM5 183 aa10.96□□□□□ -0.65
USB1-211ENST00000565662 SRP19P09132 144 aaKnown RBP10.96□□□□□ -0.65
USB1-211ENST00000565662 PEA15Q15121 130 aa10.96□□□□□ -0.65
USB1-211ENST00000565662 AMMECR1LQ6DCA0 310 aa10.96□□□□□ -0.65
USB1-211ENST00000565662 MRAP2Q96G30 205 aa10.96□□□□□ -0.65
USB1-211ENST00000565662 ABCA13Q86UQ4 5058 aa10.96□□□□□ -0.66
USB1-211ENST00000565662 SDHAF1A6NFY7 115 aa10.95□□□□□ -0.66
USB1-211ENST00000565662 I3L3M4 83 aa10.95□□□□□ -0.66
USB1-211ENST00000565662 RIGQ13278 110 aa10.95□□□□□ -0.66
USB1-211ENST00000565662 TMEM241Q24JQ0 296 aa10.95□□□□□ -0.66
USB1-211ENST00000565662 C20orf203Q8NBC4 194 aa10.95□□□□□ -0.66
USB1-211ENST00000565662 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.94□□□□□ -0.66
USB1-211ENST00000565662 A0A1B0GW15 77 aa10.94□□□□□ -0.66
USB1-211ENST00000565662 CFAP161Q6P656 301 aa10.94□□□□□ -0.66
USB1-211ENST00000565662 BTF3L4Q96K17 158 aa10.94□□□□□ -0.66
USB1-211ENST00000565662 AP5S1Q9NUS5 200 aa10.94□□□□□ -0.66
USB1-211ENST00000565662 NAT8Q9UHE5 227 aa10.94□□□□□ -0.66
USB1-211ENST00000565662 NAT8BQ9UHF3 227 aa10.94□□□□□ -0.66
USB1-211ENST00000565662 CLPSL2Q6UWE3 100 aa10.93□□□□□ -0.66
USB1-211ENST00000565662 TMEM101Q96IK0 257 aa10.93□□□□□ -0.66
USB1-211ENST00000565662 CHAC1Q9BUX1 264 aa10.93□□□□□ -0.66
USB1-211ENST00000565662 ST20Q9HBF5 79 aa10.93□□□□□ -0.66
USB1-211ENST00000565662 TRAV26-2A0A0B4J265 109 aa10.92□□□□□ -0.66
USB1-211ENST00000565662 S100A8P05109 93 aa10.92□□□□□ -0.66
USB1-211ENST00000565662 PMCHP20382 165 aa10.92□□□□□ -0.66
USB1-211ENST00000565662 ISOC2Q96AB3 205 aa10.92□□□□□ -0.66
USB1-211ENST00000565662 PKIGQ9Y2B9 76 aa10.92□□□□□ -0.66
USB1-211ENST00000565662 PPP1R2P9O14990 202 aa10.91□□□□□ -0.66
USB1-211ENST00000565662 TCAPO15273 167 aa10.91□□□□□ -0.66
USB1-211ENST00000565662 SMR3BP02814 79 aaPredicted RBP10.91□□□□□ -0.66
USB1-211ENST00000565662 CNBPP62633 177 aaKnown RBP10.91□□□□□ -0.66
USB1-211ENST00000565662 C9orf163Q8N9P6 203 aa10.91□□□□□ -0.66
USB1-211ENST00000565662 FAM30AQ9NZY2 134 aa10.91□□□□□ -0.66
USB1-211ENST00000565662 IGLV4-60A0A075B6I1 120 aa10.9□□□□□ -0.66
USB1-211ENST00000565662 RPL39LQ96EH5 51 aaKnown RBP10.9□□□□□ -0.66
USB1-211ENST00000565662 V9GYV3 84 aa10.9□□□□□ -0.66
USB1-211ENST00000565662 TRBV27A0A0K0K1C4 114 aa10.89□□□□□ -0.67
USB1-211ENST00000565662 RPL23P62829 140 aaKnown RBP10.89□□□□□ -0.67
USB1-211ENST00000565662 ADIRFQ15847 76 aa10.89□□□□□ -0.67
USB1-211ENST00000565662 RNASEKQ6P5S7 137 aaKnown RBP10.89□□□□□ -0.67
USB1-211ENST00000565662 KRTAP26-1Q6PEX3 210 aa10.89□□□□□ -0.67
USB1-211ENST00000565662 SCXQ7RTU7 201 aa10.89□□□□□ -0.67
USB1-211ENST00000565662 LINC00528Q8N1L1 170 aa10.89□□□□□ -0.67
USB1-211ENST00000565662 IGLV10-54A0A075B6I4 117 aa10.88□□□□□ -0.67
USB1-211ENST00000565662 hDV102S1A0JD36 115 aa10.88□□□□□ -0.67
USB1-211ENST00000565662 LINC00862A6NCI5 91 aa10.88□□□□□ -0.67
USB1-211ENST00000565662 PRSS1P07477 247 aa10.88□□□□□ -0.67
USB1-211ENST00000565662 KIR2DL4Q99706 377 aa10.88□□□□□ -0.67
USB1-211ENST00000565662 A0A1B0GVG6 124 aa10.87□□□□□ -0.67
USB1-211ENST00000565662 C7orf77A4D0Y5 90 aa10.87□□□□□ -0.67
USB1-211ENST00000565662 FGF6P10767 208 aa10.87□□□□□ -0.67
USB1-211ENST00000565662 NUP35Q8NFH5 326 aa10.87□□□□□ -0.67
USB1-211ENST00000565662 OR5A1Q8NGJ0 315 aa10.87□□□□□ -0.67
USB1-211ENST00000565662 DEFB104AQ8WTQ1 72 aa10.87□□□□□ -0.67
USB1-211ENST00000565662 TMEM18Q96B42 140 aa10.87□□□□□ -0.67
USB1-211ENST00000565662 F8W036 122 aa10.86□□□□□ -0.67
USB1-211ENST00000565662 VCYO14598 125 aa10.86□□□□□ -0.67
USB1-211ENST00000565662 CCL25O15444 150 aa10.86□□□□□ -0.67
USB1-211ENST00000565662 RAB4AP20338 218 aa10.86□□□□□ -0.67
USB1-211ENST00000565662 MRPL52Q86TS9 123 aaKnown RBP10.86□□□□□ -0.67
USB1-211ENST00000565662 RNF185Q96GF1 192 aa10.86□□□□□ -0.67
USB1-211ENST00000565662 IGHV3-64A0A075B6Q5 118 aa10.85□□□□□ -0.67
USB1-211ENST00000565662 SMIM27A0A1W2PRY6 76 aa10.85□□□□□ -0.67
USB1-211ENST00000565662 ESDP10768 282 aa10.85□□□□□ -0.67
USB1-211ENST00000565662 FCER1GP30273 86 aa10.85□□□□□ -0.67
USB1-211ENST00000565662 POLR2KP53803 58 aaKnown RBP10.85□□□□□ -0.67
USB1-211ENST00000565662 HAMPP81172 84 aa10.85□□□□□ -0.67
USB1-211ENST00000565662 RAB14P61106 215 aa10.84□□□□□ -0.67
USB1-211ENST00000565662 SUMO2P61956 95 aaKnown RBP10.84□□□□□ -0.67
USB1-211ENST00000565662 AMN1Q8IY45 258 aa10.84□□□□□ -0.67
USB1-211ENST00000565662 CIRBP-AS1Q8TBR5 109 aa10.84□□□□□ -0.67
USB1-211ENST00000565662 CSDC2Q9Y534 153 aaKnown RBP10.84□□□□□ -0.67
USB1-211ENST00000565662 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.83□□□□□ -0.68
USB1-211ENST00000565662 IGKV2-29A2NJV5 120 aaPredicted RBP10.83□□□□□ -0.68
USB1-211ENST00000565662 RPL32P62910 135 aaKnown RBP10.83□□□□□ -0.68
USB1-211ENST00000565662 PNRC1Q12796 327 aaPredicted RBP10.83□□□□□ -0.68
USB1-211ENST00000565662 SS18Q15532 418 aa10.83□□□□□ -0.68
USB1-211ENST00000565662 LINC01620Q4KN68 170 aa10.83□□□□□ -0.68
USB1-211ENST00000565662 C20orf78Q9BR46 151 aa10.83□□□□□ -0.68
USB1-211ENST00000565662 GAGE12HA6NDE8 117 aa10.82□□□□□ -0.68
USB1-211ENST00000565662 TSHBP01222 138 aa10.82□□□□□ -0.68
USB1-211ENST00000565662 PPBPP02775 128 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms