RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 UBE2D3P61077 147 aa13.41□□□□□ -0.26
CSPG4P13-201ENST00000565545 UBE2D2P62837 147 aa13.41□□□□□ -0.26
CSPG4P13-201ENST00000565545 Q9UF83 564 aa13.41□□□□□ -0.26
CSPG4P13-201ENST00000565545 LEPROTL1O95214 131 aa13.4□□□□□ -0.26
CSPG4P13-201ENST00000565545 NUDT3O95989 172 aa13.4□□□□□ -0.26
CSPG4P13-201ENST00000565545 PMCHL1Q16048 86 aa13.4□□□□□ -0.26
CSPG4P13-201ENST00000565545 NEGR1Q7Z3B1 354 aa13.4□□□□□ -0.26
CSPG4P13-201ENST00000565545 OR10D4PQ8NGN7 298 aa13.4□□□□□ -0.26
CSPG4P13-201ENST00000565545 C11orf45Q8TAV5 145 aa13.4□□□□□ -0.26
CSPG4P13-201ENST00000565545 HSPB8Q9UJY1 196 aa13.4□□□□□ -0.26
CSPG4P13-201ENST00000565545 A0A096LNJ9 63 aa13.39□□□□□ -0.27
CSPG4P13-201ENST00000565545 GAGE12JA6NER3 117 aa13.39□□□□□ -0.27
CSPG4P13-201ENST00000565545 TSHBP01222 138 aa13.39□□□□□ -0.27
CSPG4P13-201ENST00000565545 AKR1D1P51857 326 aa13.39□□□□□ -0.27
CSPG4P13-201ENST00000565545 GAGE1Q13065 139 aa13.39□□□□□ -0.27
CSPG4P13-201ENST00000565545 GAGE4Q13068 117 aa13.39□□□□□ -0.27
CSPG4P13-201ENST00000565545 GAGE5Q13069 117 aa13.39□□□□□ -0.27
CSPG4P13-201ENST00000565545 GAGE13Q4V321 117 aa13.39□□□□□ -0.27
CSPG4P13-201ENST00000565545 DNAH1Q9P2D7 4330 aa13.38□□□□□ -0.27
CSPG4P13-201ENST00000565545 F5H768 121 aa13.38□□□□□ -0.27
CSPG4P13-201ENST00000565545 PAX4O43316 350 aa13.38□□□□□ -0.27
CSPG4P13-201ENST00000565545 LINC00694P0DN24 101 aa13.38□□□□□ -0.27
CSPG4P13-201ENST00000565545 COTL1Q14019 142 aa13.38□□□□□ -0.27
CSPG4P13-201ENST00000565545 GYPEP15421 78 aa13.36□□□□□ -0.27
CSPG4P13-201ENST00000565545 BTF3P20290 206 aaKnown RBP13.36□□□□□ -0.27
CSPG4P13-201ENST00000565545 TMEM97Q5BJF2 176 aa13.36□□□□□ -0.27
CSPG4P13-201ENST00000565545 TOMM6Q96B49 74 aa13.36□□□□□ -0.27
CSPG4P13-201ENST00000565545 LOC100131303A0A0U1RQF7 123 aa13.35□□□□□ -0.27
CSPG4P13-201ENST00000565545 PHLDA1Q8WV24 401 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P13-201ENST00000565545 GTSF1LQ9H1H1 148 aa13.35□□□□□ -0.27
CSPG4P13-201ENST00000565545 CYSLTR1Q9Y271 337 aa13.35□□□□□ -0.27
CSPG4P13-201ENST00000565545 H3BNG1 76 aa13.34□□□□□ -0.27
CSPG4P13-201ENST00000565545 ATP5LO75964 103 aa13.34□□□□□ -0.27
CSPG4P13-201ENST00000565545 HTN3P15516 51 aa13.34□□□□□ -0.27
CSPG4P13-201ENST00000565545 C2orf66Q6UXQ4 117 aa13.34□□□□□ -0.27
CSPG4P13-201ENST00000565545 SH2D6Q7Z4S9 175 aa13.34□□□□□ -0.27
CSPG4P13-201ENST00000565545 VSIG2Q96IQ7 327 aa13.34□□□□□ -0.27
CSPG4P13-201ENST00000565545 TRAV26-1A0A087WT03 109 aa13.33□□□□□ -0.28
CSPG4P13-201ENST00000565545 IGHV3-38A0A0C4DH36 116 aa13.33□□□□□ -0.28
CSPG4P13-201ENST00000565545 NANOS2P60321 138 aaKnown RBP13.33□□□□□ -0.28
CSPG4P13-201ENST00000565545 Q6ZTC4 211 aa13.33□□□□□ -0.28
CSPG4P13-201ENST00000565545 C20orf203Q8NBC4 194 aa13.33□□□□□ -0.28
CSPG4P13-201ENST00000565545 MAP1LC3CQ9BXW4 147 aa13.33□□□□□ -0.28
CSPG4P13-201ENST00000565545 MRPL23Q16540 153 aaKnown RBP13.32□□□□□ -0.28
CSPG4P13-201ENST00000565545 ATP6V0E2Q8NHE4 81 aa13.32□□□□□ -0.28
CSPG4P13-201ENST00000565545 C3orf79P0CE67 100 aa13.31□□□□□ -0.28
CSPG4P13-201ENST00000565545 KRTDAPP60985 99 aa13.31□□□□□ -0.28
CSPG4P13-201ENST00000565545 IFI27L1Q96BM0 104 aa13.31□□□□□ -0.28
CSPG4P13-201ENST00000565545 SCGB3A1Q96QR1 104 aa13.31□□□□□ -0.28
CSPG4P13-201ENST00000565545 TRAV10A0A0B4J240 114 aa13.3□□□□□ -0.28
CSPG4P13-201ENST00000565545 A0A0J9YY99 117 aa13.3□□□□□ -0.28
CSPG4P13-201ENST00000565545 JOSD1Q15040 202 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P13-201ENST00000565545 LINC00173Q6ZV60 143 aa13.3□□□□□ -0.28
CSPG4P13-201ENST00000565545 ERASQ7Z444 233 aa13.3□□□□□ -0.28
CSPG4P13-201ENST00000565545 CHCHD7Q9BUK0 85 aa13.3□□□□□ -0.28
CSPG4P13-201ENST00000565545 ICOSQ9Y6W8 199 aa13.3□□□□□ -0.28
CSPG4P13-201ENST00000565545 DEFB131BA0A096LNP1 70 aa13.29□□□□□ -0.28
CSPG4P13-201ENST00000565545 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P13-201ENST00000565545 SMAGPQ0VAQ4 97 aa13.29□□□□□ -0.28
CSPG4P13-201ENST00000565545 PET117Q6UWS5 81 aa13.29□□□□□ -0.28
CSPG4P13-201ENST00000565545 DEFB104AQ8WTQ1 72 aa13.29□□□□□ -0.28
CSPG4P13-201ENST00000565545 TMEM141Q96I45 108 aa13.29□□□□□ -0.28
CSPG4P13-201ENST00000565545 TIMM17AQ99595 171 aa13.29□□□□□ -0.28
CSPG4P13-201ENST00000565545 SYS1-DBNDD2H3BUS1 97 aa13.28□□□□□ -0.28
CSPG4P13-201ENST00000565545 NPSP0C0P6 89 aa13.28□□□□□ -0.28
CSPG4P13-201ENST00000565545 SPATA12Q7Z6I5 190 aa13.28□□□□□ -0.28
CSPG4P13-201ENST00000565545 STARD9Q9P2P6 4700 aa13.27□□□□□ -0.28
CSPG4P13-201ENST00000565545 TRBV25-1A0A075B6N4 114 aa13.27□□□□□ -0.29
CSPG4P13-201ENST00000565545 H7C423 109 aa13.27□□□□□ -0.29
CSPG4P13-201ENST00000565545 SMIM6P0DI80 62 aa13.27□□□□□ -0.29
CSPG4P13-201ENST00000565545 NTM-AS1Q6ZSK4 140 aa13.27□□□□□ -0.29
CSPG4P13-201ENST00000565545 PYGO1Q9Y3Y4 419 aa13.27□□□□□ -0.29
CSPG4P13-201ENST00000565545 TRBV6-8A0A0A6YYG3 113 aa13.26□□□□□ -0.29
CSPG4P13-201ENST00000565545 IGIPA6NJ69 53 aa13.26□□□□□ -0.29
CSPG4P13-201ENST00000565545 RPL39P62891 51 aaKnown RBP13.26□□□□□ -0.29
CSPG4P13-201ENST00000565545 TMEM243Q9BU79 118 aa13.26□□□□□ -0.29
CSPG4P13-201ENST00000565545 TIMM21Q9BVV7 248 aa13.26□□□□□ -0.29
CSPG4P13-201ENST00000565545 C20orf202A1L168 122 aa13.25□□□□□ -0.29
CSPG4P13-201ENST00000565545 SCGB1D1O95968 90 aa13.25□□□□□ -0.29
CSPG4P13-201ENST00000565545 PYY3Q5JQD4 70 aa13.25□□□□□ -0.29
CSPG4P13-201ENST00000565545 Q6ZN92 141 aa13.25□□□□□ -0.29
CSPG4P13-201ENST00000565545 LYSTQ99698 3801 aa13.25□□□□□ -0.29
CSPG4P13-201ENST00000565545 SPANXA1Q9NS26 97 aa13.25□□□□□ -0.29
CSPG4P13-201ENST00000565545 A0A096LPF7 62 aa13.24□□□□□ -0.29
CSPG4P13-201ENST00000565545 PRSS1P07477 247 aa13.24□□□□□ -0.29
CSPG4P13-201ENST00000565545 PAPPA-AS1Q5QFB9 102 aa13.24□□□□□ -0.29
CSPG4P13-201ENST00000565545 TIRAPP58753 221 aa13.23□□□□□ -0.29
CSPG4P13-201ENST00000565545 CSMD3Q7Z407 3707 aa13.23□□□□□ -0.29
CSPG4P13-201ENST00000565545 TRAV12-1A0A0B4J245 112 aa13.22□□□□□ -0.29
CSPG4P13-201ENST00000565545 UBE2L6O14933 153 aa13.22□□□□□ -0.29
CSPG4P13-201ENST00000565545 LINC01545Q5VT33 79 aa13.22□□□□□ -0.29
CSPG4P13-201ENST00000565545 LGALS9CQ6DKI2 356 aa13.22□□□□□ -0.29
CSPG4P13-201ENST00000565545 MRPL52Q86TS9 123 aaKnown RBP13.22□□□□□ -0.29
CSPG4P13-201ENST00000565545 UBE2D4Q9Y2X8 147 aa13.22□□□□□ -0.29
CSPG4P13-201ENST00000565545 CSDC2Q9Y534 153 aaKnown RBP13.22□□□□□ -0.29
CSPG4P13-201ENST00000565545 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.21□□□□□ -0.29
CSPG4P13-201ENST00000565545 IGKV2-29A2NJV5 120 aaPredicted RBP13.21□□□□□ -0.29
CSPG4P13-201ENST00000565545 Q8N976 141 aa13.21□□□□□ -0.29
CSPG4P13-201ENST00000565545 C15orf53Q8NAA6 179 aa13.21□□□□□ -0.29
CSPG4P13-201ENST00000565545 BAALCQ8WXS3 180 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms