RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 COTL1Q14019 142 aa12.86□□□□□ -0.35
CLN6-206ENST00000565471 C9orf163Q8N9P6 203 aa12.86□□□□□ -0.35
CLN6-206ENST00000565471 CLRN3Q8NCR9 226 aa12.86□□□□□ -0.35
CLN6-206ENST00000565471 IGLV4-60A0A075B6I1 120 aa12.85□□□□□ -0.35
CLN6-206ENST00000565471 ALKAL2Q6UX46 152 aa12.85□□□□□ -0.35
CLN6-206ENST00000565471 LYPD6BQ8NI32 183 aa12.85□□□□□ -0.35
CLN6-206ENST00000565471 GTSF1Q8WW33 167 aa12.85□□□□□ -0.35
CLN6-206ENST00000565471 IGLV10-54A0A075B6I4 117 aa12.84□□□□□ -0.35
CLN6-206ENST00000565471 UBE2L6O14933 153 aa12.84□□□□□ -0.35
CLN6-206ENST00000565471 AMTP48728 403 aa12.84□□□□□ -0.35
CLN6-206ENST00000565471 KRTAP10-4P60372 401 aaPredicted RBP12.84□□□□□ -0.35
CLN6-206ENST00000565471 FAM231DQ6ZW35 169 aa12.84□□□□□ -0.35
CLN6-206ENST00000565471 GATD1Q8NB37 220 aa12.84□□□□□ -0.35
CLN6-206ENST00000565471 J3QL48 77 aa12.83□□□□□ -0.36
CLN6-206ENST00000565471 SMIM15Q7Z3B0 74 aa12.83□□□□□ -0.36
CLN6-206ENST00000565471 GFRA4Q9GZZ7 299 aa12.83□□□□□ -0.36
CLN6-206ENST00000565471 KRTAP29-1A8MX34 341 aaPredicted RBP12.82□□□□□ -0.36
CLN6-206ENST00000565471 GATCO43716 136 aaKnown RBP12.82□□□□□ -0.36
CLN6-206ENST00000565471 TRAV26-2A0A0B4J265 109 aa12.81□□□□□ -0.36
CLN6-206ENST00000565471 A8MWL6 223 aa12.81□□□□□ -0.36
CLN6-206ENST00000565471 CNBPP62633 177 aaKnown RBP12.81□□□□□ -0.36
CLN6-206ENST00000565471 TEX261Q6UWH6 196 aa12.81□□□□□ -0.36
CLN6-206ENST00000565471 NCR2O95944 276 aa12.8□□□□□ -0.36
CLN6-206ENST00000565471 CT83Q5H943 113 aa12.8□□□□□ -0.36
CLN6-206ENST00000565471 hCG_2014768A0A024R1R8 64 aa12.79□□□□□ -0.36
CLN6-206ENST00000565471 NDUFS6O75380 124 aaKnown RBP12.79□□□□□ -0.36
CLN6-206ENST00000565471 FOXA3P55318 350 aaPredicted RBP12.79□□□□□ -0.36
CLN6-206ENST00000565471 RPL39LQ96EH5 51 aaKnown RBP12.79□□□□□ -0.36
CLN6-206ENST00000565471 hDV102S1A0JD36 115 aa12.78□□□□□ -0.36
CLN6-206ENST00000565471 SDIM1Q6ZPB5 146 aa12.78□□□□□ -0.36
CLN6-206ENST00000565471 H7C423 109 aa12.77□□□□□ -0.37
CLN6-206ENST00000565471 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.77□□□□□ -0.37
CLN6-206ENST00000565471 CEBPGP53567 150 aa12.76□□□□□ -0.37
CLN6-206ENST00000565471 AP5S1Q9NUS5 200 aa12.76□□□□□ -0.37
CLN6-206ENST00000565471 SDHAF1A6NFY7 115 aa12.75□□□□□ -0.37
CLN6-206ENST00000565471 APCSP02743 223 aa12.75□□□□□ -0.37
CLN6-206ENST00000565471 AMMECR1LQ6DCA0 310 aa12.75□□□□□ -0.37
CLN6-206ENST00000565471 LINC01551Q86U37 167 aa12.75□□□□□ -0.37
CLN6-206ENST00000565471 BORCS7Q96B45 105 aa12.75□□□□□ -0.37
CLN6-206ENST00000565471 SMIM7Q9BQ49 75 aa12.75□□□□□ -0.37
CLN6-206ENST00000565471 EIF5A2Q9GZV4 153 aaKnown RBP12.75□□□□□ -0.37
CLN6-206ENST00000565471 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.74□□□□□ -0.37
CLN6-206ENST00000565471 TRBV6-5A0A0K0K1A5 114 aa12.74□□□□□ -0.37
CLN6-206ENST00000565471 RPL37AP61513 92 aaKnown RBP12.74□□□□□ -0.37
CLN6-206ENST00000565471 CIRBPQ14011 172 aaKnown RBP12.74□□□□□ -0.37
CLN6-206ENST00000565471 PANO1I0J062 215 aa12.73□□□□□ -0.37
CLN6-206ENST00000565471 CFAP161Q6P656 301 aa12.73□□□□□ -0.37
CLN6-206ENST00000565471 TSKUQ8WUA8 353 aa12.73□□□□□ -0.37
CLN6-206ENST00000565471 FAM210AQ96ND0 272 aa12.73□□□□□ -0.37
CLN6-206ENST00000565471 IGHV3-64A0A075B6Q5 118 aa12.72□□□□□ -0.37
CLN6-206ENST00000565471 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.72□□□□□ -0.37
CLN6-206ENST00000565471 A0A1B0GUT8 65 aa12.72□□□□□ -0.37
CLN6-206ENST00000565471 IGKV2-29A2NJV5 120 aaPredicted RBP12.72□□□□□ -0.37
CLN6-206ENST00000565471 FAM231BA6NCW3 169 aa12.72□□□□□ -0.37
CLN6-206ENST00000565471 GAGE12HA6NDE8 117 aa12.72□□□□□ -0.37
CLN6-206ENST00000565471 I3L3M4 83 aa12.72□□□□□ -0.37
CLN6-206ENST00000565471 SLPIP03973 132 aa12.72□□□□□ -0.37
CLN6-206ENST00000565471 FGF6P10767 208 aa12.72□□□□□ -0.37
CLN6-206ENST00000565471 RNASEKQ6P5S7 137 aaKnown RBP12.72□□□□□ -0.37
CLN6-206ENST00000565471 OSTCQ9NRP0 149 aa12.72□□□□□ -0.37
CLN6-206ENST00000565471 IGKV3OR2-268A0A0C4DH90 116 aa12.71□□□□□ -0.37
CLN6-206ENST00000565471 ZNF727A8MUV8 499 aa12.71□□□□□ -0.37
CLN6-206ENST00000565471 HIGD1CA8MV81 97 aa12.71□□□□□ -0.37
CLN6-206ENST00000565471 OXTP01178 125 aa12.71□□□□□ -0.37
CLN6-206ENST00000565471 ZNF25P17030 456 aaPredicted RBP12.71□□□□□ -0.37
CLN6-206ENST00000565471 C15orf56Q8N910 161 aa12.71□□□□□ -0.37
CLN6-206ENST00000565471 TMEM191AQ9H0A3 160 aa12.71□□□□□ -0.37
CLN6-206ENST00000565471 SRP19P09132 144 aaKnown RBP12.7□□□□□ -0.38
CLN6-206ENST00000565471 PMCHP20382 165 aa12.7□□□□□ -0.38
CLN6-206ENST00000565471 CHCHD10Q8WYQ3 142 aaPredicted RBP12.7□□□□□ -0.38
CLN6-206ENST00000565471 RNF185Q96GF1 192 aa12.69□□□□□ -0.38
CLN6-206ENST00000565471 ST20Q9HBF5 79 aa12.69□□□□□ -0.38
CLN6-206ENST00000565471 GAS8-AS1O95177 125 aa12.68□□□□□ -0.38
CLN6-206ENST00000565471 ESDP10768 282 aa12.68□□□□□ -0.38
CLN6-206ENST00000565471 MRAP2Q96G30 205 aa12.68□□□□□ -0.38
CLN6-206ENST00000565471 TSHBP01222 138 aa12.67□□□□□ -0.38
CLN6-206ENST00000565471 OR5A1Q8NGJ0 315 aa12.67□□□□□ -0.38
CLN6-206ENST00000565471 BTF3L4Q96K17 158 aa12.67□□□□□ -0.38
CLN6-206ENST00000565471 RAB4AP20338 218 aa12.66□□□□□ -0.38
CLN6-206ENST00000565471 POLR2KP53803 58 aaKnown RBP12.66□□□□□ -0.38
CLN6-206ENST00000565471 SPACA4Q8TDM5 124 aa12.66□□□□□ -0.38
CLN6-206ENST00000565471 TMEM101Q96IK0 257 aa12.66□□□□□ -0.38
CLN6-206ENST00000565471 TMEM242Q9NWH2 141 aa12.66□□□□□ -0.38
CLN6-206ENST00000565471 V9GYV3 84 aa12.66□□□□□ -0.38
CLN6-206ENST00000565471 GVQW2A0A096LPI5 108 aaPredicted RBP12.65□□□□□ -0.38
CLN6-206ENST00000565471 TRBV27A0A0K0K1C4 114 aa12.65□□□□□ -0.38
CLN6-206ENST00000565471 RPS10P46783 165 aaKnown RBP12.65□□□□□ -0.38
CLN6-206ENST00000565471 A0A087WYN8 130 aa12.64□□□□□ -0.39
CLN6-206ENST00000565471 CHTF8P0CG12 524 aa12.64□□□□□ -0.39
CLN6-206ENST00000565471 HNRNPA3P51991 378 aaKnown RBP12.64□□□□□ -0.39
CLN6-206ENST00000565471 FOXI1Q12951 378 aa12.64□□□□□ -0.39
CLN6-206ENST00000565471 RIGQ13278 110 aa12.64□□□□□ -0.39
CLN6-206ENST00000565471 HIGD2BQ4VC39 106 aa12.64□□□□□ -0.39
CLN6-206ENST00000565471 FAM74A3Q4VXF1 159 aa12.64□□□□□ -0.39
CLN6-206ENST00000565471 MRPL52Q86TS9 123 aaKnown RBP12.64□□□□□ -0.39
CLN6-206ENST00000565471 AMN1Q8IY45 258 aa12.64□□□□□ -0.39
CLN6-206ENST00000565471 ISOC2Q96AB3 205 aa12.64□□□□□ -0.39
CLN6-206ENST00000565471 TMEM241Q24JQ0 296 aa12.63□□□□□ -0.39
CLN6-206ENST00000565471 NUP35Q8NFH5 326 aa12.63□□□□□ -0.39
CLN6-206ENST00000565471 DPH3Q96FX2 82 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms