RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 IGLV4-60A0A075B6I1 120 aa4.15□□□□□ -1.75
TCF4-228ENST00000565393 TRAV26-2A0A0B4J265 109 aa4.15□□□□□ -1.75
TCF4-228ENST00000565393 A0A1B0GUV1 79 aa4.15□□□□□ -1.75
TCF4-228ENST00000565393 KRTAP29-1A8MX34 341 aaPredicted RBP4.15□□□□□ -1.75
TCF4-228ENST00000565393 GATCO43716 136 aaKnown RBP4.15□□□□□ -1.75
TCF4-228ENST00000565393 BLOC1S1P78537 153 aa4.15□□□□□ -1.75
TCF4-228ENST00000565393 AMMECR1LQ6DCA0 310 aa4.15□□□□□ -1.75
TCF4-228ENST00000565393 SDIM1Q6ZPB5 146 aa4.15□□□□□ -1.75
TCF4-228ENST00000565393 C9orf163Q8N9P6 203 aa4.15□□□□□ -1.75
TCF4-228ENST00000565393 GATD1Q8NB37 220 aa4.15□□□□□ -1.75
TCF4-228ENST00000565393 C20orf203Q8NBC4 194 aa4.15□□□□□ -1.75
TCF4-228ENST00000565393 RPP21Q9H633 154 aaKnown RBP4.15□□□□□ -1.75
TCF4-228ENST00000565393 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.14□□□□□ -1.75
TCF4-228ENST00000565393 GAGE12HA6NDE8 117 aa4.14□□□□□ -1.75
TCF4-228ENST00000565393 K7EN84 100 aa4.14□□□□□ -1.75
TCF4-228ENST00000565393 PMCHP20382 165 aa4.14□□□□□ -1.75
TCF4-228ENST00000565393 FOXA3P55318 350 aaPredicted RBP4.14□□□□□ -1.75
TCF4-228ENST00000565393 RPL37AP61513 92 aaKnown RBP4.14□□□□□ -1.75
TCF4-228ENST00000565393 RNASEKQ6P5S7 137 aaKnown RBP4.14□□□□□ -1.75
TCF4-228ENST00000565393 CFAP161Q6P656 301 aa4.14□□□□□ -1.75
TCF4-228ENST00000565393 KRTAP26-1Q6PEX3 210 aa4.14□□□□□ -1.75
TCF4-228ENST00000565393 ALKAL2Q6UX46 152 aa4.14□□□□□ -1.75
TCF4-228ENST00000565393 AKAP14Q86UN6 197 aa4.14□□□□□ -1.75
TCF4-228ENST00000565393 BORCS7Q96B45 105 aa4.14□□□□□ -1.75
TCF4-228ENST00000565393 PGLYRP4Q96LB8 373 aa4.14□□□□□ -1.75
TCF4-228ENST00000565393 EIF5A2Q9GZV4 153 aaKnown RBP4.14□□□□□ -1.75
TCF4-228ENST00000565393 IGHV3-64A0A075B6Q5 118 aa4.13□□□□□ -1.75
TCF4-228ENST00000565393 A8MWL6 223 aa4.13□□□□□ -1.75
TCF4-228ENST00000565393 CTRLP40313 264 aa4.13□□□□□ -1.75
TCF4-228ENST00000565393 TEX261Q6UWH6 196 aa4.13□□□□□ -1.75
TCF4-228ENST00000565393 RPL39LQ96EH5 51 aaKnown RBP4.13□□□□□ -1.75
TCF4-228ENST00000565393 GFRA4Q9GZZ7 299 aa4.13□□□□□ -1.75
TCF4-228ENST00000565393 DNAH11Q96DT5 4516 aa4.13□□□□□ -1.75
TCF4-228ENST00000565393 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.12□□□□□ -1.75
TCF4-228ENST00000565393 IGKV2-29A2NJV5 120 aaPredicted RBP4.12□□□□□ -1.75
TCF4-228ENST00000565393 SDHAF1A6NFY7 115 aa4.12□□□□□ -1.75
TCF4-228ENST00000565393 TMEM250H0YL14 139 aa4.12□□□□□ -1.75
TCF4-228ENST00000565393 I3L3M4 83 aa4.12□□□□□ -1.75
TCF4-228ENST00000565393 NCR2O95944 276 aa4.12□□□□□ -1.75
TCF4-228ENST00000565393 OXTP01178 125 aa4.12□□□□□ -1.75
TCF4-228ENST00000565393 GTSF1Q8WW33 167 aa4.12□□□□□ -1.75
TCF4-228ENST00000565393 TMEM101Q96IK0 257 aa4.12□□□□□ -1.75
TCF4-228ENST00000565393 BTF3L4Q96K17 158 aa4.12□□□□□ -1.75
TCF4-228ENST00000565393 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.12□□□□□ -1.75
TCF4-228ENST00000565393 PKHD1P08F94 4074 aa4.11□□□□□ -1.75
TCF4-228ENST00000565393 ZNF727A8MUV8 499 aa4.11□□□□□ -1.75
TCF4-228ENST00000565393 H7C423 109 aa4.11□□□□□ -1.75
TCF4-228ENST00000565393 PANO1I0J062 215 aa4.11□□□□□ -1.75
TCF4-228ENST00000565393 APCSP02743 223 aa4.11□□□□□ -1.75
TCF4-228ENST00000565393 SLPIP03973 132 aa4.11□□□□□ -1.75
TCF4-228ENST00000565393 FGF6P10767 208 aa4.11□□□□□ -1.75
TCF4-228ENST00000565393 RPS10P46783 165 aaKnown RBP4.11□□□□□ -1.75
TCF4-228ENST00000565393 KRTAP10-4P60372 401 aaPredicted RBP4.11□□□□□ -1.75
TCF4-228ENST00000565393 CNBPP62633 177 aaKnown RBP4.11□□□□□ -1.75
TCF4-228ENST00000565393 HIGD2BQ4VC39 106 aa4.11□□□□□ -1.75
TCF4-228ENST00000565393 SERTAD4-AS1Q5TG53 156 aa4.11□□□□□ -1.75
TCF4-228ENST00000565393 FAM231DQ6ZW35 169 aa4.11□□□□□ -1.75
TCF4-228ENST00000565393 CHCHD10Q8WYQ3 142 aaPredicted RBP4.11□□□□□ -1.75
TCF4-228ENST00000565393 CNFNQ9BYD5 112 aa4.11□□□□□ -1.75
TCF4-228ENST00000565393 ST20Q9HBF5 79 aa4.11□□□□□ -1.75
TCF4-228ENST00000565393 A0A087WYN8 130 aa4.1□□□□□ -1.75
TCF4-228ENST00000565393 CHTF8P0CG12 524 aa4.1□□□□□ -1.75
TCF4-228ENST00000565393 S100A12P80511 92 aa4.1□□□□□ -1.75
TCF4-228ENST00000565393 IFITM2Q01629 132 aa4.1□□□□□ -1.75
TCF4-228ENST00000565393 COX6A2Q02221 97 aa4.1□□□□□ -1.75
TCF4-228ENST00000565393 SS18Q15532 418 aa4.1□□□□□ -1.75
TCF4-228ENST00000565393 SMIM7Q9BQ49 75 aa4.1□□□□□ -1.75
TCF4-228ENST00000565393 DYNC1H1Q14204 4646 aaKnown RBP4.09□□□□□ -1.75
TCF4-228ENST00000565393 A0A1B0GUT8 65 aa4.09□□□□□ -1.75
TCF4-228ENST00000565393 FAM231BA6NCW3 169 aa4.09□□□□□ -1.75
TCF4-228ENST00000565393 HIGD1CA8MV81 97 aa4.09□□□□□ -1.75
TCF4-228ENST00000565393 VCYO14598 125 aa4.09□□□□□ -1.75
TCF4-228ENST00000565393 GAS8-AS1O95177 125 aa4.09□□□□□ -1.75
TCF4-228ENST00000565393 ZNF25P17030 456 aaPredicted RBP4.09□□□□□ -1.75
TCF4-228ENST00000565393 RAB4AP20338 218 aa4.09□□□□□ -1.75
TCF4-228ENST00000565393 FCER1GP30273 86 aa4.09□□□□□ -1.75
TCF4-228ENST00000565393 XCL1P47992 114 aa4.09□□□□□ -1.75
TCF4-228ENST00000565393 RIGQ13278 110 aa4.09□□□□□ -1.75
TCF4-228ENST00000565393 TMEM241Q24JQ0 296 aa4.09□□□□□ -1.75
TCF4-228ENST00000565393 MAJINQ3KP22 176 aa4.09□□□□□ -1.75
TCF4-228ENST00000565393 LINC01551Q86U37 167 aa4.09□□□□□ -1.75
TCF4-228ENST00000565393 OR5A1Q8NGJ0 315 aa4.09□□□□□ -1.75
TCF4-228ENST00000565393 LYPD6BQ8NI32 183 aa4.09□□□□□ -1.75
TCF4-228ENST00000565393 C7orf33Q8WU49 177 aa4.09□□□□□ -1.75
TCF4-228ENST00000565393 TSKUQ8WUA8 353 aa4.09□□□□□ -1.75
TCF4-228ENST00000565393 IGKV2-24A0A0C4DH68 120 aa4.08□□□□□ -1.76
TCF4-228ENST00000565393 TRBV6-5A0A0K0K1A5 114 aa4.08□□□□□ -1.76
TCF4-228ENST00000565393 LINC00959A0A1B0GUT2 108 aa4.08□□□□□ -1.76
TCF4-228ENST00000565393 CCL25O15444 150 aa4.08□□□□□ -1.76
TCF4-228ENST00000565393 NDUFS6O75380 124 aaKnown RBP4.08□□□□□ -1.76
TCF4-228ENST00000565393 SRP19P09132 144 aaKnown RBP4.08□□□□□ -1.76
TCF4-228ENST00000565393 HNRNPA3P51991 378 aaKnown RBP4.08□□□□□ -1.76
TCF4-228ENST00000565393 CT83Q5H943 113 aa4.08□□□□□ -1.76
TCF4-228ENST00000565393 AMN1Q8IY45 258 aa4.08□□□□□ -1.76
TCF4-228ENST00000565393 ZNF664Q8N3J9 261 aa4.08□□□□□ -1.76
TCF4-228ENST00000565393 STPG4Q8N801 248 aa4.08□□□□□ -1.76
TCF4-228ENST00000565393 C15orf56Q8N910 161 aa4.08□□□□□ -1.76
TCF4-228ENST00000565393 PRSS3P2Q8NHM4 247 aa4.08□□□□□ -1.76
TCF4-228ENST00000565393 MRAP2Q96G30 205 aa4.08□□□□□ -1.76
TCF4-228ENST00000565393 RNF185Q96GF1 192 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms