RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 AKAP14Q86UN6 197 aa9.49□□□□□ -0.89
USB1-210ENST00000565151 IGLV10-54A0A075B6I4 117 aa9.48□□□□□ -0.89
USB1-210ENST00000565151 XKRY2A2RUG3 117 aa9.48□□□□□ -0.89
USB1-210ENST00000565151 H7C1H1 209 aa9.48□□□□□ -0.89
USB1-210ENST00000565151 GAS8-AS1O95177 125 aa9.48□□□□□ -0.89
USB1-210ENST00000565151 SLPIP03973 132 aa9.48□□□□□ -0.89
USB1-210ENST00000565151 TRGC1P0CF51 173 aa9.48□□□□□ -0.89
USB1-210ENST00000565151 REG3AQ06141 175 aa9.48□□□□□ -0.89
USB1-210ENST00000565151 TWIST1Q15672 202 aa9.48□□□□□ -0.89
USB1-210ENST00000565151 RPL39LQ96EH5 51 aaKnown RBP9.48□□□□□ -0.89
USB1-210ENST00000565151 PGLYRP4Q96LB8 373 aa9.48□□□□□ -0.89
USB1-210ENST00000565151 A0A1B0GVG6 124 aa9.47□□□□□ -0.89
USB1-210ENST00000565151 TAGLN2P37802 199 aaKnown RBP9.47□□□□□ -0.89
USB1-210ENST00000565151 PKIAP61925 76 aa9.47□□□□□ -0.89
USB1-210ENST00000565151 TMEM243Q9BU79 118 aa9.47□□□□□ -0.89
USB1-210ENST00000565151 BIN3Q9NQY0 253 aa9.47□□□□□ -0.89
USB1-210ENST00000565151 A0A1B0GUV1 79 aa9.46□□□□□ -0.9
USB1-210ENST00000565151 TMEM250H0YL14 139 aa9.46□□□□□ -0.9
USB1-210ENST00000565151 C9orf163Q8N9P6 203 aa9.46□□□□□ -0.9
USB1-210ENST00000565151 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.46□□□□□ -0.9
USB1-210ENST00000565151 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.46□□□□□ -0.9
USB1-210ENST00000565151 C14orf177Q52M58 125 aa9.45□□□□□ -0.9
USB1-210ENST00000565151 PLA2G1BP04054 148 aaKnown RBP9.44□□□□□ -0.9
USB1-210ENST00000565151 BLOC1S1P78537 153 aa9.44□□□□□ -0.9
USB1-210ENST00000565151 DGAT2L7PQ6IED9 249 aa9.44□□□□□ -0.9
USB1-210ENST00000565151 SDIM1Q6ZPB5 146 aa9.44□□□□□ -0.9
USB1-210ENST00000565151 FAM231DQ6ZW35 169 aa9.44□□□□□ -0.9
USB1-210ENST00000565151 GATCO43716 136 aaKnown RBP9.43□□□□□ -0.9
USB1-210ENST00000565151 AMTP48728 403 aa9.43□□□□□ -0.9
USB1-210ENST00000565151 HMCN2Q8NDA2 5059 aa9.42□□□□□ -0.9
USB1-210ENST00000565151 FAM231BA6NCW3 169 aa9.42□□□□□ -0.9
USB1-210ENST00000565151 SRP19P09132 144 aaKnown RBP9.42□□□□□ -0.9
USB1-210ENST00000565151 HNRNPA3P51991 378 aaKnown RBP9.42□□□□□ -0.9
USB1-210ENST00000565151 CEBPGP53567 150 aa9.42□□□□□ -0.9
USB1-210ENST00000565151 COTL1Q14019 142 aa9.42□□□□□ -0.9
USB1-210ENST00000565151 LINC01551Q86U37 167 aa9.42□□□□□ -0.9
USB1-210ENST00000565151 KRTAP29-1A8MX34 341 aaPredicted RBP9.41□□□□□ -0.9
USB1-210ENST00000565151 C9JQL5 133 aa9.41□□□□□ -0.9
USB1-210ENST00000565151 C15orf56Q8N910 161 aa9.41□□□□□ -0.9
USB1-210ENST00000565151 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.4□□□□□ -0.9
USB1-210ENST00000565151 TRAV8-4A0A0B4J246 113 aa9.4□□□□□ -0.9
USB1-210ENST00000565151 IGKV2-29A2NJV5 120 aaPredicted RBP9.4□□□□□ -0.9
USB1-210ENST00000565151 RNF185Q96GF1 192 aa9.4□□□□□ -0.9
USB1-210ENST00000565151 FAM210AQ96ND0 272 aa9.4□□□□□ -0.9
USB1-210ENST00000565151 A8MWL6 223 aa9.39□□□□□ -0.91
USB1-210ENST00000565151 RPS10P46783 165 aaKnown RBP9.39□□□□□ -0.91
USB1-210ENST00000565151 CNBPP62633 177 aaKnown RBP9.39□□□□□ -0.91
USB1-210ENST00000565151 CT83Q5H943 113 aa9.39□□□□□ -0.91
USB1-210ENST00000565151 SMIM7Q9BQ49 75 aa9.39□□□□□ -0.91
USB1-210ENST00000565151 TRBV6-5A0A0K0K1A5 114 aa9.38□□□□□ -0.91
USB1-210ENST00000565151 hDV102S1A0JD36 115 aa9.38□□□□□ -0.91
USB1-210ENST00000565151 GAGE12HA6NDE8 117 aa9.38□□□□□ -0.91
USB1-210ENST00000565151 SDHAF1A6NFY7 115 aa9.38□□□□□ -0.91
USB1-210ENST00000565151 TSHBP01222 138 aa9.38□□□□□ -0.91
USB1-210ENST00000565151 CHTF8P0CG12 524 aa9.38□□□□□ -0.91
USB1-210ENST00000565151 CIRBPQ14011 172 aaKnown RBP9.38□□□□□ -0.91
USB1-210ENST00000565151 CLRN3Q8NCR9 226 aa9.38□□□□□ -0.91
USB1-210ENST00000565151 EIF5A2Q9GZV4 153 aaKnown RBP9.38□□□□□ -0.91
USB1-210ENST00000565151 V9GYV3 84 aa9.38□□□□□ -0.91
USB1-210ENST00000565151 IGKV3OR2-268A0A0C4DH90 116 aa9.37□□□□□ -0.91
USB1-210ENST00000565151 ZNF727A8MUV8 499 aa9.37□□□□□ -0.91
USB1-210ENST00000565151 HIGD1CA8MV81 97 aa9.37□□□□□ -0.91
USB1-210ENST00000565151 UBE2L6O14933 153 aa9.37□□□□□ -0.91
USB1-210ENST00000565151 ESDP10768 282 aa9.37□□□□□ -0.91
USB1-210ENST00000565151 TSKUQ8WUA8 353 aa9.37□□□□□ -0.91
USB1-210ENST00000565151 OSTCQ9NRP0 149 aa9.37□□□□□ -0.91
USB1-210ENST00000565151 J3QL48 77 aa9.36□□□□□ -0.91
USB1-210ENST00000565151 NDUFS6O75380 124 aaKnown RBP9.36□□□□□ -0.91
USB1-210ENST00000565151 NCR2O95944 276 aa9.36□□□□□ -0.91
USB1-210ENST00000565151 FGF6P10767 208 aa9.36□□□□□ -0.91
USB1-210ENST00000565151 RAB4AP20338 218 aa9.36□□□□□ -0.91
USB1-210ENST00000565151 SRSF3P84103 164 aaKnown RBP9.36□□□□□ -0.91
USB1-210ENST00000565151 LCE2AQ5TA79 106 aaPredicted RBP9.36□□□□□ -0.91
USB1-210ENST00000565151 SMKR1H3BMG3 65 aa9.35□□□□□ -0.91
USB1-210ENST00000565151 POLR2KP53803 58 aaKnown RBP9.35□□□□□ -0.91
USB1-210ENST00000565151 AMN1Q8IY45 258 aa9.35□□□□□ -0.91
USB1-210ENST00000565151 CHCHD10Q8WYQ3 142 aaPredicted RBP9.35□□□□□ -0.91
USB1-210ENST00000565151 TMEM191AQ9H0A3 160 aa9.35□□□□□ -0.91
USB1-210ENST00000565151 TNXBP22105 4242 aa9.35□□□□□ -0.91
USB1-210ENST00000565151 A0A1B0GUT8 65 aa9.34□□□□□ -0.91
USB1-210ENST00000565151 I3L3M4 83 aa9.34□□□□□ -0.91
USB1-210ENST00000565151 APCSP02743 223 aa9.34□□□□□ -0.91
USB1-210ENST00000565151 RPL37AP61513 92 aaKnown RBP9.34□□□□□ -0.91
USB1-210ENST00000565151 FOXI1Q12951 378 aa9.34□□□□□ -0.91
USB1-210ENST00000565151 HIGD2BQ4VC39 106 aa9.34□□□□□ -0.91
USB1-210ENST00000565151 NUP35Q8NFH5 326 aa9.34□□□□□ -0.91
USB1-210ENST00000565151 ISOC2Q96AB3 205 aa9.34□□□□□ -0.91
USB1-210ENST00000565151 TMEM242Q9NWH2 141 aa9.34□□□□□ -0.91
USB1-210ENST00000565151 PMCHP20382 165 aa9.33□□□□□ -0.92
USB1-210ENST00000565151 RPL23P62829 140 aaKnown RBP9.33□□□□□ -0.92
USB1-210ENST00000565151 RNASEKQ6P5S7 137 aaKnown RBP9.33□□□□□ -0.92
USB1-210ENST00000565151 TEX261Q6UWH6 196 aa9.33□□□□□ -0.92
USB1-210ENST00000565151 SMIM15Q7Z3B0 74 aa9.33□□□□□ -0.92
USB1-210ENST00000565151 NRACQ8N912 160 aa9.33□□□□□ -0.92
USB1-210ENST00000565151 H7C423 109 aa9.32□□□□□ -0.92
USB1-210ENST00000565151 AMMECR1LQ6DCA0 310 aa9.32□□□□□ -0.92
USB1-210ENST00000565151 SPACA4Q8TDM5 124 aa9.32□□□□□ -0.92
USB1-210ENST00000565151 ST20Q9HBF5 79 aa9.32□□□□□ -0.92
USB1-210ENST00000565151 IGHV3-64A0A075B6Q5 118 aa9.31□□□□□ -0.92
USB1-210ENST00000565151 A0A087WYN8 130 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms