RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, human

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN9-204	ENST00000564970	CCL14	Q16627	93 aa		4.62	□□□□□ -1.67
PTPN9-204	ENST00000564970	DEFB126	Q9BYW3	111 aa		4.62	□□□□□ -1.67
PTPN9-204	ENST00000564970	KLK15	Q9H2R5	256 aa		4.62	□□□□□ -1.67
PTPN9-204	ENST00000564970	LINC00474	Q9P2X8	69 aa		4.62	□□□□□ -1.67
PTPN9-204	ENST00000564970	LINC00588	Q9Y4M8	146 aa		4.62	□□□□□ -1.67
PTPN9-204	ENST00000564970	ITPR3	Q14573	2671 aa		4.62	□□□□□ -1.67
PTPN9-204	ENST00000564970	C2orf16	Q68DN1	1984 aa		4.62	□□□□□ -1.67
PTPN9-204	ENST00000564970	DMXL2	Q8TDJ6	3036 aa		4.61	□□□□□ -1.67
PTPN9-204	ENST00000564970	TRAV23DV6	A0A075B6W5	121 aa		4.61	□□□□□ -1.67
PTPN9-204	ENST00000564970		A0A087WVE0	104 aa		4.61	□□□□□ -1.67
PTPN9-204	ENST00000564970	SRRM5	B3KS81	715 aa		4.61	□□□□□ -1.67
PTPN9-204	ENST00000564970	GAS8-AS1	O95177	125 aa		4.61	□□□□□ -1.67
PTPN9-204	ENST00000564970	PATE4	P0C8F1	98 aa		4.61	□□□□□ -1.67
PTPN9-204	ENST00000564970	LINC00205	P59089	165 aa		4.61	□□□□□ -1.67
PTPN9-204	ENST00000564970	XP32	Q5T750	250 aa		4.61	□□□□□ -1.67
PTPN9-204	ENST00000564970	LCA10	Q71F78	164 aa		4.61	□□□□□ -1.67
PTPN9-204	ENST00000564970	C6orf223	Q8N319	242 aa		4.61	□□□□□ -1.67
PTPN9-204	ENST00000564970	LINC01560	Q8TB33	94 aa		4.61	□□□□□ -1.67
PTPN9-204	ENST00000564970	CYP4F30P	Q9H0H9	118 aa		4.61	□□□□□ -1.67
PTPN9-204	ENST00000564970	C22orf24	Q9Y442	160 aa		4.61	□□□□□ -1.67
PTPN9-204	ENST00000564970	ESPL1	Q14674	2120 aa		4.61	□□□□□ -1.67
PTPN9-204	ENST00000564970	KALRN	O60229	2985 aa		4.61	□□□□□ -1.67
PTPN9-204	ENST00000564970	FBN2	P35556	2912 aa		4.6	□□□□□ -1.67
PTPN9-204	ENST00000564970	MED12	Q93074	2177 aa		4.6	□□□□□ -1.67
PTPN9-204	ENST00000564970	RELN	P78509	3460 aa		4.6	□□□□□ -1.67
PTPN9-204	ENST00000564970		A0A087X002	238 aa		4.6	□□□□□ -1.67
PTPN9-204	ENST00000564970	IGKV3D-20	A0A0C4DH25	116 aa		4.6	□□□□□ -1.67
PTPN9-204	ENST00000564970	IGKV1-17	P01599	117 aa		4.6	□□□□□ -1.67
PTPN9-204	ENST00000564970	TRGV3	P03979	118 aa		4.6	□□□□□ -1.67
PTPN9-204	ENST00000564970	C17orf58	Q2M2W7	97 aa		4.6	□□□□□ -1.67
PTPN9-204	ENST00000564970	ADAMTSL4-AS1	Q5T5F5	129 aa		4.6	□□□□□ -1.67
PTPN9-204	ENST00000564970	TMEM105	Q8N8V8	129 aa		4.6	□□□□□ -1.67
PTPN9-204	ENST00000564970	CCL4L1	Q8NHW4	92 aa		4.6	□□□□□ -1.67
PTPN9-204	ENST00000564970	TMEM254	Q8TBM7	123 aa		4.6	□□□□□ -1.67
PTPN9-204	ENST00000564970	OPRPN	Q99935	248 aa	Predicted RBP	4.6	□□□□□ -1.67
PTPN9-204	ENST00000564970	ORMDL1	Q9P0S3	153 aa		4.6	□□□□□ -1.67
PTPN9-204	ENST00000564970	SMAD5-AS1	Q9Y6J3	95 aa		4.6	□□□□□ -1.67
PTPN9-204	ENST00000564970	SPTA1	P02549	2419 aa		4.6	□□□□□ -1.67
PTPN9-204	ENST00000564970	IGHV3-15	A0A0B4J1V0	119 aa		4.59	□□□□□ -1.67
PTPN9-204	ENST00000564970	TRAV21	A0A0B4J279	112 aa		4.59	□□□□□ -1.67
PTPN9-204	ENST00000564970	LOC100131303	A0A0U1RQF7	123 aa		4.59	□□□□□ -1.67
PTPN9-204	ENST00000564970	RNF223	E7ERA6	249 aa		4.59	□□□□□ -1.67
PTPN9-204	ENST00000564970		I3L2K1	104 aa		4.59	□□□□□ -1.67
PTPN9-204	ENST00000564970	TMEM256-PLSCR3	K7ERE1	68 aa		4.59	□□□□□ -1.67
PTPN9-204	ENST00000564970	PRY	O14603	147 aa		4.59	□□□□□ -1.67
PTPN9-204	ENST00000564970	ZNF73	O43830	326 aa	Predicted RBP	4.59	□□□□□ -1.67
PTPN9-204	ENST00000564970	IGKV1-16	P04430	117 aa		4.59	□□□□□ -1.67
PTPN9-204	ENST00000564970	B3GALT5-AS1	P59052	145 aa		4.59	□□□□□ -1.67
PTPN9-204	ENST00000564970	OXLD1	Q5BKU9	147 aa		4.59	□□□□□ -1.67
PTPN9-204	ENST00000564970	C9orf47	Q6ZRZ4	202 aa		4.59	□□□□□ -1.67
PTPN9-204	ENST00000564970	C7orf65	Q6ZTY9	151 aa		4.59	□□□□□ -1.67
PTPN9-204	ENST00000564970	GGN	Q86UU5	652 aa		4.59	□□□□□ -1.67
PTPN9-204	ENST00000564970	GPHB5	Q86YW7	130 aa		4.59	□□□□□ -1.67
PTPN9-204	ENST00000564970	MPLKIP	Q8TAP9	179 aa		4.59	□□□□□ -1.67
PTPN9-204	ENST00000564970	LINC00308	Q8TCZ7	52 aa		4.59	□□□□□ -1.67
PTPN9-204	ENST00000564970	RPP25	Q9BUL9	199 aa	Known RBP	4.59	□□□□□ -1.67
PTPN9-204	ENST00000564970	ZNF407	Q9C0G0	2248 aa		4.59	□□□□□ -1.67
PTPN9-204	ENST00000564970	NACA	E9PAV3	2078 aa		4.58	□□□□□ -1.68
PTPN9-204	ENST00000564970	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.58	□□□□□ -1.68
PTPN9-204	ENST00000564970	TRAV12-3	A0A0B4J271	114 aa		4.58	□□□□□ -1.68
PTPN9-204	ENST00000564970	hDV103S1	A0JD37	113 aa		4.58	□□□□□ -1.68
PTPN9-204	ENST00000564970	IGKV2D-40	P01614	121 aa	Predicted RBP	4.58	□□□□□ -1.68
PTPN9-204	ENST00000564970	CRP	P02741	224 aa		4.58	□□□□□ -1.68
PTPN9-204	ENST00000564970	C15orf32	Q32M92	178 aa		4.58	□□□□□ -1.68
PTPN9-204	ENST00000564970	ASB16-AS1	Q495Z4	193 aa		4.58	□□□□□ -1.68
PTPN9-204	ENST00000564970	SERTAD4-AS1	Q5TG53	156 aa		4.58	□□□□□ -1.68
PTPN9-204	ENST00000564970	ENHO	Q6UWT2	76 aa		4.58	□□□□□ -1.68
PTPN9-204	ENST00000564970	DIRC1	Q969H9	104 aa		4.58	□□□□□ -1.68
PTPN9-204	ENST00000564970	LINC00167	Q96N53	147 aa		4.58	□□□□□ -1.68
PTPN9-204	ENST00000564970	LIMD2	Q9BT23	127 aa		4.58	□□□□□ -1.68
PTPN9-204	ENST00000564970	C14orf132	Q9NPU4	83 aa		4.58	□□□□□ -1.68
PTPN9-204	ENST00000564970	KNTC1	P50748	2209 aa		4.58	□□□□□ -1.68
PTPN9-204	ENST00000564970	INTS1	Q8N201	2190 aa	Known RBP	4.58	□□□□□ -1.68
PTPN9-204	ENST00000564970	FER1L5	A0AVI2	2057 aa		4.58	□□□□□ -1.68
PTPN9-204	ENST00000564970	DIDO1	Q9BTC0	2240 aa	Known RBP	4.57	□□□□□ -1.68
PTPN9-204	ENST00000564970	AKAP13	Q12802	2813 aa		4.57	□□□□□ -1.68
PTPN9-204	ENST00000564970	IGKV1D-17	A0A075B6S4	117 aa		4.57	□□□□□ -1.68
PTPN9-204	ENST00000564970	IGLV5-45	A0A087WSX0	123 aa		4.57	□□□□□ -1.68
PTPN9-204	ENST00000564970	LOC110117498	A0A087WWA1	95 aa		4.57	□□□□□ -1.68
PTPN9-204	ENST00000564970		A0A087WWL8	130 aa		4.57	□□□□□ -1.68
PTPN9-204	ENST00000564970	C8orf87	E5RJ46	101 aa		4.57	□□□□□ -1.68
PTPN9-204	ENST00000564970		H3BS24	57 aa		4.57	□□□□□ -1.68
PTPN9-204	ENST00000564970	LHB	P01229	141 aa		4.57	□□□□□ -1.68
PTPN9-204	ENST00000564970	IGLV2-23	P01705	113 aa		4.57	□□□□□ -1.68
PTPN9-204	ENST00000564970	PIK3CD-AS1	Q5SR53	167 aa		4.57	□□□□□ -1.68
PTPN9-204	ENST00000564970		Q8N6K4	173 aa		4.57	□□□□□ -1.68
PTPN9-204	ENST00000564970	C20orf203	Q8NBC4	194 aa		4.57	□□□□□ -1.68
PTPN9-204	ENST00000564970	RMI2	Q96E14	147 aa		4.57	□□□□□ -1.68
PTPN9-204	ENST00000564970	BBC3	Q96PG8	261 aa	Predicted RBP	4.57	□□□□□ -1.68
PTPN9-204	ENST00000564970	PCNX2	A6NKB5	2137 aa		4.57	□□□□□ -1.68
PTPN9-204	ENST00000564970	DOCK7	Q96N67	2140 aa		4.57	□□□□□ -1.68
PTPN9-204	ENST00000564970	DNHD1	Q96M86	4753 aa		4.57	□□□□□ -1.68
PTPN9-204	ENST00000564970	PRRC2A	P48634	2157 aa	Known RBP	4.56	□□□□□ -1.68
PTPN9-204	ENST00000564970	RP1	P56715	2156 aa		4.56	□□□□□ -1.68
PTPN9-204	ENST00000564970	SPTY2D1-AS1	A0A0U1RR47	76 aa		4.56	□□□□□ -1.68
PTPN9-204	ENST00000564970	ZNHIT1	O43257	154 aa		4.56	□□□□□ -1.68
PTPN9-204	ENST00000564970	IGLV3-19	P01714	112 aa		4.56	□□□□□ -1.68
PTPN9-204	ENST00000564970	CCL4	P13236	92 aa		4.56	□□□□□ -1.68
PTPN9-204	ENST00000564970	S100A4	P26447	101 aa	Known RBP	4.56	□□□□□ -1.68
PTPN9-204	ENST00000564970	FOLR3	P41439	243 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms