RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 CLPSL2Q6UWE3 100 aa12.08□□□□□ -0.48
CLN6-204ENST00000564752 SCXQ7RTU7 201 aa12.08□□□□□ -0.48
CLN6-204ENST00000564752 BORCS7Q96B45 105 aa12.08□□□□□ -0.48
CLN6-204ENST00000564752 PGLYRP4Q96LB8 373 aa12.08□□□□□ -0.48
CLN6-204ENST00000564752 TMEM243Q9BU79 118 aa12.08□□□□□ -0.48
CLN6-204ENST00000564752 TRAV26-2A0A0B4J265 109 aa12.07□□□□□ -0.48
CLN6-204ENST00000564752 HLA-DQA1P01909 254 aa12.07□□□□□ -0.48
CLN6-204ENST00000564752 COTL1Q14019 142 aa12.07□□□□□ -0.48
CLN6-204ENST00000564752 GATD1Q8NB37 220 aa12.07□□□□□ -0.48
CLN6-204ENST00000564752 DEFB104AQ8WTQ1 72 aa12.07□□□□□ -0.48
CLN6-204ENST00000564752 KRTAP29-1A8MX34 341 aaPredicted RBP12.06□□□□□ -0.48
CLN6-204ENST00000564752 C14orf177Q52M58 125 aa12.06□□□□□ -0.48
CLN6-204ENST00000564752 LINC00269Q8N2A0 174 aa12.06□□□□□ -0.48
CLN6-204ENST00000564752 CHAC1Q9BUX1 264 aa12.06□□□□□ -0.48
CLN6-204ENST00000564752 PRR34Q9NV39 138 aa12.06□□□□□ -0.48
CLN6-204ENST00000564752 LRP1Q07954 4544 aaKnown RBP12.06□□□□□ -0.48
CLN6-204ENST00000564752 UBE2L6O14933 153 aa12.05□□□□□ -0.48
CLN6-204ENST00000564752 AMTP48728 403 aa12.05□□□□□ -0.48
CLN6-204ENST00000564752 FOXA3P55318 350 aaPredicted RBP12.04□□□□□ -0.48
CLN6-204ENST00000564752 TSKUQ8WUA8 353 aa12.04□□□□□ -0.48
CLN6-204ENST00000564752 RPL39LQ96EH5 51 aaKnown RBP12.04□□□□□ -0.48
CLN6-204ENST00000564752 OSTCQ9NRP0 149 aa12.04□□□□□ -0.48
CLN6-204ENST00000564752 HIGD1CA8MV81 97 aa12.03□□□□□ -0.48
CLN6-204ENST00000564752 REG3AQ06141 175 aa12.03□□□□□ -0.48
CLN6-204ENST00000564752 TEX261Q6UWH6 196 aa12.03□□□□□ -0.48
CLN6-204ENST00000564752 GFRA4Q9GZZ7 299 aa12.03□□□□□ -0.48
CLN6-204ENST00000564752 FAT3Q8TDW7 4589 aa12.03□□□□□ -0.48
CLN6-204ENST00000564752 KRTAP10-4P60372 401 aaPredicted RBP12.02□□□□□ -0.49
CLN6-204ENST00000564752 C20orf203Q8NBC4 194 aa12.02□□□□□ -0.49
CLN6-204ENST00000564752 CIRBP-AS1Q8TBR5 109 aa12.02□□□□□ -0.49
CLN6-204ENST00000564752 A0A1B0GUT8 65 aa12.01□□□□□ -0.49
CLN6-204ENST00000564752 A0A1B0GUV1 79 aa12.01□□□□□ -0.49
CLN6-204ENST00000564752 USP17L23D6RBM5 183 aa12.01□□□□□ -0.49
CLN6-204ENST00000564752 FAM74A3Q4VXF1 159 aa12.01□□□□□ -0.49
CLN6-204ENST00000564752 IGLV4-60A0A075B6I1 120 aa12□□□□□ -0.49
CLN6-204ENST00000564752 FAM231BA6NCW3 169 aa12□□□□□ -0.49
CLN6-204ENST00000564752 TMEM241Q24JQ0 296 aa12□□□□□ -0.49
CLN6-204ENST00000564752 ISOC2Q96AB3 205 aa12□□□□□ -0.49
CLN6-204ENST00000564752 IGLV10-54A0A075B6I4 117 aa11.99□□□□□ -0.49
CLN6-204ENST00000564752 SDHAF1A6NFY7 115 aa11.99□□□□□ -0.49
CLN6-204ENST00000564752 NCR2O95944 276 aa11.99□□□□□ -0.49
CLN6-204ENST00000564752 V9GYV3 84 aa11.99□□□□□ -0.49
CLN6-204ENST00000564752 HMCN2Q8NDA2 5059 aa11.98□□□□□ -0.49
CLN6-204ENST00000564752 TRAV8-4A0A0B4J246 113 aa11.98□□□□□ -0.49
CLN6-204ENST00000564752 APCSP02743 223 aa11.98□□□□□ -0.49
CLN6-204ENST00000564752 RPL23P62829 140 aaKnown RBP11.98□□□□□ -0.49
CLN6-204ENST00000564752 PEA15Q15121 130 aa11.98□□□□□ -0.49
CLN6-204ENST00000564752 ADIRFQ15847 76 aa11.98□□□□□ -0.49
CLN6-204ENST00000564752 KRTAP26-1Q6PEX3 210 aa11.98□□□□□ -0.49
CLN6-204ENST00000564752 TMEM191AQ9H0A3 160 aa11.98□□□□□ -0.49
CLN6-204ENST00000564752 C9JQL5 133 aa11.97□□□□□ -0.49
CLN6-204ENST00000564752 NAT8Q9UHE5 227 aa11.97□□□□□ -0.49
CLN6-204ENST00000564752 TRBV6-5A0A0K0K1A5 114 aa11.96□□□□□ -0.49
CLN6-204ENST00000564752 SRSF3P84103 164 aaKnown RBP11.96□□□□□ -0.49
CLN6-204ENST00000564752 RIGQ13278 110 aa11.96□□□□□ -0.49
CLN6-204ENST00000564752 AMMECR1LQ6DCA0 310 aa11.96□□□□□ -0.49
CLN6-204ENST00000564752 PKHD1L1Q86WI1 4243 aa11.96□□□□□ -0.5
CLN6-204ENST00000564752 I3L3M4 83 aa11.95□□□□□ -0.5
CLN6-204ENST00000564752 PRSS1P07477 247 aa11.95□□□□□ -0.5
CLN6-204ENST00000564752 PMCHP20382 165 aa11.95□□□□□ -0.5
CLN6-204ENST00000564752 AMN1Q8IY45 258 aa11.95□□□□□ -0.5
CLN6-204ENST00000564752 NUP35Q8NFH5 326 aa11.95□□□□□ -0.5
CLN6-204ENST00000564752 SMDT1Q9H4I9 107 aa11.95□□□□□ -0.5
CLN6-204ENST00000564752 ST20Q9HBF5 79 aa11.95□□□□□ -0.5
CLN6-204ENST00000564752 NAT8BQ9UHF3 227 aa11.95□□□□□ -0.5
CLN6-204ENST00000564752 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.94□□□□□ -0.5
CLN6-204ENST00000564752 IGKV2-29A2NJV5 120 aaPredicted RBP11.94□□□□□ -0.5
CLN6-204ENST00000564752 GAS8-AS1O95177 125 aa11.94□□□□□ -0.5
CLN6-204ENST00000564752 DGAT2L7PQ6IED9 249 aa11.94□□□□□ -0.5
CLN6-204ENST00000564752 RNASEKQ6P5S7 137 aaKnown RBP11.94□□□□□ -0.5
CLN6-204ENST00000564752 MRAP2Q96G30 205 aa11.94□□□□□ -0.5
CLN6-204ENST00000564752 RNF185Q96GF1 192 aa11.94□□□□□ -0.5
CLN6-204ENST00000564752 H7C423 109 aa11.93□□□□□ -0.5
CLN6-204ENST00000564752 RAB4AP20338 218 aa11.93□□□□□ -0.5
CLN6-204ENST00000564752 IGKV3OR2-268A0A0C4DH90 116 aa11.92□□□□□ -0.5
CLN6-204ENST00000564752 OXTP01178 125 aa11.92□□□□□ -0.5
CLN6-204ENST00000564752 FGF6P10767 208 aa11.92□□□□□ -0.5
CLN6-204ENST00000564752 CLRN3Q8NCR9 226 aa11.92□□□□□ -0.5
CLN6-204ENST00000564752 RPS10P46783 165 aaKnown RBP11.91□□□□□ -0.5
CLN6-204ENST00000564752 C9orf163Q8N9P6 203 aa11.91□□□□□ -0.5
CLN6-204ENST00000564752 TMEM242Q9NWH2 141 aa11.91□□□□□ -0.5
CLN6-204ENST00000564752 hDV102S1A0JD36 115 aa11.9□□□□□ -0.5
CLN6-204ENST00000564752 TSHBP01222 138 aa11.9□□□□□ -0.5
CLN6-204ENST00000564752 ZNF25P17030 456 aaPredicted RBP11.9□□□□□ -0.5
CLN6-204ENST00000564752 SMIM27A0A1W2PRY6 76 aa11.89□□□□□ -0.51
CLN6-204ENST00000564752 SMKR1H3BMG3 65 aa11.89□□□□□ -0.51
CLN6-204ENST00000564752 SERTAD4-AS1Q5TG53 156 aa11.89□□□□□ -0.51
CLN6-204ENST00000564752 BTF3L4Q96K17 158 aa11.89□□□□□ -0.51
CLN6-204ENST00000564752 TRBV27A0A0K0K1C4 114 aa11.88□□□□□ -0.51
CLN6-204ENST00000564752 GAGE12HA6NDE8 117 aa11.88□□□□□ -0.51
CLN6-204ENST00000564752 PPP1R17O96001 155 aa11.88□□□□□ -0.51
CLN6-204ENST00000564752 ESDP10768 282 aa11.88□□□□□ -0.51
CLN6-204ENST00000564752 POLR2KP53803 58 aaKnown RBP11.88□□□□□ -0.51
CLN6-204ENST00000564752 RPL37AP61513 92 aaKnown RBP11.88□□□□□ -0.51
CLN6-204ENST00000564752 TMEM101Q96IK0 257 aa11.88□□□□□ -0.51
CLN6-204ENST00000564752 CAMPP49913 170 aa11.87□□□□□ -0.51
CLN6-204ENST00000564752 SDIM1Q6ZPB5 146 aa11.87□□□□□ -0.51
CLN6-204ENST00000564752 AP5S1Q9NUS5 200 aa11.87□□□□□ -0.51
CLN6-204ENST00000564752 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.87□□□□□ -0.51
CLN6-204ENST00000564752 A0A1B0GW15 77 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms