RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 PEMTQ9UBM1 199 aa11.12□□□□□ -0.63
HERC2-207ENST00000564734 HIVEP1P15822 2718 aa11.12□□□□□ -0.63
HERC2-207ENST00000564734 IGHV3-73A0A0B4J1V6 119 aa11.12□□□□□ -0.63
HERC2-207ENST00000564734 M0R2P5 195 aa11.12□□□□□ -0.63
HERC2-207ENST00000564734 RHODO00212 210 aa11.12□□□□□ -0.63
HERC2-207ENST00000564734 LINC00467Q9BRT7 94 aa11.12□□□□□ -0.63
HERC2-207ENST00000564734 DUX3Q96PT4 197 aa11.11□□□□□ -0.63
HERC2-207ENST00000564734 HTN1P15515 57 aa11.11□□□□□ -0.63
HERC2-207ENST00000564734 LGALS3P17931 250 aaKnown RBP11.11□□□□□ -0.63
HERC2-207ENST00000564734 UBE2D3P61077 147 aa11.11□□□□□ -0.63
HERC2-207ENST00000564734 UBE2D2P62837 147 aa11.11□□□□□ -0.63
HERC2-207ENST00000564734 MAP6D1Q9H9H5 199 aa11.11□□□□□ -0.63
HERC2-207ENST00000564734 A0A0J9YXV3 536 aa11.11□□□□□ -0.63
HERC2-207ENST00000564734 A8MWV9 139 aa11.11□□□□□ -0.63
HERC2-207ENST00000564734 CFC1BP0CG36 223 aa11.11□□□□□ -0.63
HERC2-207ENST00000564734 CFC1P0CG37 223 aa11.11□□□□□ -0.63
HERC2-207ENST00000564734 Q6ZSN1 163 aa11.11□□□□□ -0.63
HERC2-207ENST00000564734 KRTAP1-3Q8IUG1 177 aa11.11□□□□□ -0.63
HERC2-207ENST00000564734 VCX2Q9H322 139 aa11.11□□□□□ -0.63
HERC2-207ENST00000564734 SMR3AQ99954 134 aa11.1□□□□□ -0.63
HERC2-207ENST00000564734 SH2D6Q7Z4S9 175 aa11.1□□□□□ -0.63
HERC2-207ENST00000564734 C11orf72Q8NBR9 251 aa11.1□□□□□ -0.63
HERC2-207ENST00000564734 Q9UF83 564 aa11.1□□□□□ -0.63
HERC2-207ENST00000564734 DEFB114Q30KQ6 69 aa11.09□□□□□ -0.63
HERC2-207ENST00000564734 CRYBA4P53673 196 aa11.09□□□□□ -0.63
HERC2-207ENST00000564734 ZNF415Q09FC8 603 aa11.09□□□□□ -0.63
HERC2-207ENST00000564734 CFAP126Q5VTH2 177 aa11.09□□□□□ -0.63
HERC2-207ENST00000564734 SVIPQ8NHG7 77 aa11.09□□□□□ -0.63
HERC2-207ENST00000564734 APOMO95445 188 aa11.09□□□□□ -0.63
HERC2-207ENST00000564734 CD28P10747 220 aa11.09□□□□□ -0.63
HERC2-207ENST00000564734 ETDBQ3ZM63 59 aa11.09□□□□□ -0.63
HERC2-207ENST00000564734 MTURNQ8N3F0 131 aa11.08□□□□□ -0.64
HERC2-207ENST00000564734 CHCHD7Q9BUK0 85 aa11.08□□□□□ -0.64
HERC2-207ENST00000564734 SMCPP49901 116 aaPredicted RBP11.07□□□□□ -0.64
HERC2-207ENST00000564734 MRPS36P82909 103 aaKnown RBP11.07□□□□□ -0.64
HERC2-207ENST00000564734 BEAN1Q3B7T3 259 aa11.07□□□□□ -0.64
HERC2-207ENST00000564734 TNFRSF18Q9Y5U5 241 aa11.07□□□□□ -0.64
HERC2-207ENST00000564734 YAE1D1Q9NRH1 226 aa11.07□□□□□ -0.64
HERC2-207ENST00000564734 MXRA5Q9NR99 2828 aa11.07□□□□□ -0.64
HERC2-207ENST00000564734 TMEM238C9JI98 176 aa11.07□□□□□ -0.64
HERC2-207ENST00000564734 EIF4EBP3O60516 100 aaPredicted RBP11.07□□□□□ -0.64
HERC2-207ENST00000564734 CYSRT1A8MQ03 144 aa11.06□□□□□ -0.64
HERC2-207ENST00000564734 HIST2H2BDQ6DRA6 164 aa11.06□□□□□ -0.64
HERC2-207ENST00000564734 C10orf126Q8N4M7 172 aa11.06□□□□□ -0.64
HERC2-207ENST00000564734 CEMP1Q6PRD7 247 aaPredicted RBP11.06□□□□□ -0.64
HERC2-207ENST00000564734 DYNLRB2Q8TF09 96 aa11.06□□□□□ -0.64
HERC2-207ENST00000564734 CLUHP3Q96NS8 147 aa11.06□□□□□ -0.64
HERC2-207ENST00000564734 FN1P02751 2386 aaKnown RBP11.06□□□□□ -0.64
HERC2-207ENST00000564734 IGHV3-64A0A075B6Q5 118 aa11.05□□□□□ -0.64
HERC2-207ENST00000564734 TMEM86BQ8N661 226 aa11.05□□□□□ -0.64
HERC2-207ENST00000564734 SORL1Q92673 2214 aa11.05□□□□□ -0.64
HERC2-207ENST00000564734 LINC01587Q99440 93 aa11.05□□□□□ -0.64
HERC2-207ENST00000564734 SPXQ9BT56 116 aa11.05□□□□□ -0.64
HERC2-207ENST00000564734 RAX2Q96IS3 184 aa11.04□□□□□ -0.64
HERC2-207ENST00000564734 UBE2D4Q9Y2X8 147 aa11.04□□□□□ -0.64
HERC2-207ENST00000564734 LOC107984156A0A0G2JMH3 177 aa11.04□□□□□ -0.64
HERC2-207ENST00000564734 RS1O15537 224 aa11.04□□□□□ -0.64
HERC2-207ENST00000564734 IGHV3-53P01767 116 aa11.04□□□□□ -0.64
HERC2-207ENST00000564734 PSMB2P49721 201 aa11.04□□□□□ -0.64
HERC2-207ENST00000564734 SFTA2Q6UW10 78 aa11.04□□□□□ -0.64
HERC2-207ENST00000564734 Q6ZSV7 163 aa11.04□□□□□ -0.64
HERC2-207ENST00000564734 ARL17AQ8IVW1 177 aa11.04□□□□□ -0.64
HERC2-207ENST00000564734 PRO1854Q9UHT4 67 aa11.04□□□□□ -0.64
HERC2-207ENST00000564734 NACAE9PAV3 2078 aa11.04□□□□□ -0.64
HERC2-207ENST00000564734 IGHV3-30-3P0DP02 117 aa11.04□□□□□ -0.64
HERC2-207ENST00000564734 KHDC1LQ5JSQ8 128 aa11.04□□□□□ -0.64
HERC2-207ENST00000564734 A4D1N5 150 aa11.03□□□□□ -0.64
HERC2-207ENST00000564734 DNAJC30Q96LL9 226 aa11.03□□□□□ -0.64
HERC2-207ENST00000564734 SPANXA1Q9NS26 97 aa11.03□□□□□ -0.64
HERC2-207ENST00000564734 A0A0J9YXY3 114 aa11.03□□□□□ -0.64
HERC2-207ENST00000564734 INSP01308 110 aa11.03□□□□□ -0.64
HERC2-207ENST00000564734 TMEM263Q8WUH6 116 aaKnown RBP11.03□□□□□ -0.64
HERC2-207ENST00000564734 TCL1BO95988 128 aa11.02□□□□□ -0.64
HERC2-207ENST00000564734 INSL3P51460 131 aa11.02□□□□□ -0.64
HERC2-207ENST00000564734 LITAFQ99732 161 aa11.02□□□□□ -0.64
HERC2-207ENST00000564734 TSSC4Q9Y5U2 329 aaPredicted RBP11.02□□□□□ -0.64
HERC2-207ENST00000564734 NIPBLQ6KC79 2804 aaeCLIP11.02□□□□□ -0.64
HERC2-207ENST00000564734 J3QR89 54 aa11.02□□□□□ -0.65
HERC2-207ENST00000564734 ODF3L2Q3SX64 289 aa11.02□□□□□ -0.65
HERC2-207ENST00000564734 MUSTN1Q8IVN3 82 aa11.02□□□□□ -0.65
HERC2-207ENST00000564734 ATP6V0E2Q8NHE4 81 aa11.02□□□□□ -0.65
HERC2-207ENST00000564734 TINCRA0A1B0GVN0 87 aa11.02□□□□□ -0.65
HERC2-207ENST00000564734 LYRM7Q5U5X0 104 aa11.02□□□□□ -0.65
HERC2-207ENST00000564734 AKAP9Q99996 3911 aa11.01□□□□□ -0.65
HERC2-207ENST00000564734 AZU1P20160 251 aa11.01□□□□□ -0.65
HERC2-207ENST00000564734 RNASE13Q5GAN3 156 aaKnown RBP11.01□□□□□ -0.65
HERC2-207ENST00000564734 SPATA25Q9BR10 227 aa11.01□□□□□ -0.65
HERC2-207ENST00000564734 TIMM21Q9BVV7 248 aa11.01□□□□□ -0.65
HERC2-207ENST00000564734 NF1P21359 2839 aa11.01□□□□□ -0.65
HERC2-207ENST00000564734 A0A0B4J2C4 111 aa11.01□□□□□ -0.65
HERC2-207ENST00000564734 SBSPONQ8IVN8 264 aa11.01□□□□□ -0.65
HERC2-207ENST00000564734 IL17DQ8TAD2 202 aa11.01□□□□□ -0.65
HERC2-207ENST00000564734 TRBV20-1A0A075B6N2 111 aa11□□□□□ -0.65
HERC2-207ENST00000564734 TRAV25A0A0B4J276 109 aa11□□□□□ -0.65
HERC2-207ENST00000564734 IGHV1-58A0A0C4DH39 117 aa11□□□□□ -0.65
HERC2-207ENST00000564734 GAGE12HA6NDE8 117 aa11□□□□□ -0.65
HERC2-207ENST00000564734 IGHV3-33P01772 117 aa11□□□□□ -0.65
HERC2-207ENST00000564734 FHL3Q13643 280 aa11□□□□□ -0.65
HERC2-207ENST00000564734 GTSF1LQ9H1H1 148 aa11□□□□□ -0.65
HERC2-207ENST00000564734 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms