RNA–Protein interactions for RNA: ENST00000564480.1

KNOP1-202, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 2

Gene KNOP1, Length 1,020 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-202ENST00000564480 GAS8-AS1O95177 125 aa8.56□□□□□ -1.04
KNOP1-202ENST00000564480 SRSF9Q13242 221 aaKnown RBP eCLIP8.56□□□□□ -1.04
KNOP1-202ENST00000564480 SFT2D1Q8WV19 159 aa8.56□□□□□ -1.04
KNOP1-202ENST00000564480 MBD3L1Q8WWY6 194 aa8.56□□□□□ -1.04
KNOP1-202ENST00000564480 TPPP3Q9BW30 176 aa8.56□□□□□ -1.04
KNOP1-202ENST00000564480 ARPC5O15511 151 aa8.55□□□□□ -1.04
KNOP1-202ENST00000564480 SMCPP49901 116 aaPredicted RBP8.55□□□□□ -1.04
KNOP1-202ENST00000564480 SULT1A2P50226 295 aa8.55□□□□□ -1.04
KNOP1-202ENST00000564480 RASL11AQ6T310 242 aa8.55□□□□□ -1.04
KNOP1-202ENST00000564480 H7C1H1 209 aa8.54□□□□□ -1.04
KNOP1-202ENST00000564480 RPL35P42766 123 aaKnown RBP8.54□□□□□ -1.04
KNOP1-202ENST00000564480 FER1L6-AS1Q8NA97 138 aa8.54□□□□□ -1.04
KNOP1-202ENST00000564480 FAM213BQ8TBF2 198 aa8.54□□□□□ -1.04
KNOP1-202ENST00000564480 PGLYRP4Q96LB8 373 aa8.54□□□□□ -1.04
KNOP1-202ENST00000564480 NIT2Q9NQR4 276 aa8.54□□□□□ -1.04
KNOP1-202ENST00000564480 AMTP48728 403 aa8.53□□□□□ -1.04
KNOP1-202ENST00000564480 SPINK6Q6UWN8 80 aa8.53□□□□□ -1.04
KNOP1-202ENST00000564480 CHCHD10Q8WYQ3 142 aaPredicted RBP8.53□□□□□ -1.04
KNOP1-202ENST00000564480 GVQW2A0A096LPI5 108 aaPredicted RBP8.52□□□□□ -1.05
KNOP1-202ENST00000564480 C19orf71A6NCJ1 209 aa8.52□□□□□ -1.05
KNOP1-202ENST00000564480 SMLR1H3BR10 107 aa8.52□□□□□ -1.05
KNOP1-202ENST00000564480 CCL20P78556 96 aa8.52□□□□□ -1.05
KNOP1-202ENST00000564480 CFAP161Q6P656 301 aa8.52□□□□□ -1.05
KNOP1-202ENST00000564480 OR2D3Q8NGH3 330 aa8.52□□□□□ -1.05
KNOP1-202ENST00000564480 LINC00526Q96FQ7 95 aa8.52□□□□□ -1.05
KNOP1-202ENST00000564480 UBE2L6O14933 153 aa8.51□□□□□ -1.05
KNOP1-202ENST00000564480 PFDN1O60925 122 aa8.51□□□□□ -1.05
KNOP1-202ENST00000564480 KCNRGQ8N5I3 272 aa8.51□□□□□ -1.05
KNOP1-202ENST00000564480 LPAP08519 4548 aa8.5□□□□□ -1.05
KNOP1-202ENST00000564480 RAB19A4D1S5 217 aa8.5□□□□□ -1.05
KNOP1-202ENST00000564480 NTF3P20783 257 aa8.5□□□□□ -1.05
KNOP1-202ENST00000564480 CACNG7P62955 275 aa8.5□□□□□ -1.05
KNOP1-202ENST00000564480 FOXI1Q12951 378 aa8.5□□□□□ -1.05
KNOP1-202ENST00000564480 COTL1Q14019 142 aa8.5□□□□□ -1.05
KNOP1-202ENST00000564480 CENPWQ5EE01 88 aa8.5□□□□□ -1.05
KNOP1-202ENST00000564480 LYZL1Q6UWQ5 148 aa8.5□□□□□ -1.05
KNOP1-202ENST00000564480 Q6ZNX1 250 aa8.5□□□□□ -1.05
KNOP1-202ENST00000564480 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.49□□□□□ -1.05
KNOP1-202ENST00000564480 TRAV26-2A0A0B4J265 109 aa8.49□□□□□ -1.05
KNOP1-202ENST00000564480 IGKV2-29A2NJV5 120 aaPredicted RBP8.49□□□□□ -1.05
KNOP1-202ENST00000564480 REG3GQ6UW15 175 aa8.49□□□□□ -1.05
KNOP1-202ENST00000564480 GATD1Q8NB37 220 aa8.49□□□□□ -1.05
KNOP1-202ENST00000564480 C11orf52Q96A22 123 aa8.49□□□□□ -1.05
KNOP1-202ENST00000564480 H2AFB1P0C5Y9 115 aa8.48□□□□□ -1.05
KNOP1-202ENST00000564480 RPS20P60866 119 aaKnown RBP8.48□□□□□ -1.05
KNOP1-202ENST00000564480 TRBV20OR9-2A0A075B6H5 130 aa8.47□□□□□ -1.05
KNOP1-202ENST00000564480 UMAD1C9J7I0 102 aa8.47□□□□□ -1.05
KNOP1-202ENST00000564480 F2Z2F3 143 aa8.47□□□□□ -1.05
KNOP1-202ENST00000564480 C9orf62Q8N4C0 152 aa8.47□□□□□ -1.05
KNOP1-202ENST00000564480 RPL39LQ96EH5 51 aaKnown RBP8.47□□□□□ -1.05
KNOP1-202ENST00000564480 TRGC1P0CF51 173 aa8.46□□□□□ -1.06
KNOP1-202ENST00000564480 FGF6P10767 208 aa8.46□□□□□ -1.06
KNOP1-202ENST00000564480 FOXA3P55318 350 aaPredicted RBP8.46□□□□□ -1.06
KNOP1-202ENST00000564480 RNASEKQ6P5S7 137 aaKnown RBP8.46□□□□□ -1.06
KNOP1-202ENST00000564480 Q6ZRP5 223 aa8.46□□□□□ -1.06
KNOP1-202ENST00000564480 GNG13Q9P2W3 67 aa8.46□□□□□ -1.06
KNOP1-202ENST00000564480 FAM231BA6NCW3 169 aa8.45□□□□□ -1.06
KNOP1-202ENST00000564480 IFNA1P01562 189 aa8.45□□□□□ -1.06
KNOP1-202ENST00000564480 CTRLP40313 264 aa8.45□□□□□ -1.06
KNOP1-202ENST00000564480 XCL1P47992 114 aa8.45□□□□□ -1.06
KNOP1-202ENST00000564480 AMMECR1LQ6DCA0 310 aa8.45□□□□□ -1.06
KNOP1-202ENST00000564480 A0A1W2PNN7 141 aa8.44□□□□□ -1.06
KNOP1-202ENST00000564480 CCL25O15444 150 aa8.44□□□□□ -1.06
KNOP1-202ENST00000564480 LINC00474Q9P2X8 69 aa8.44□□□□□ -1.06
KNOP1-202ENST00000564480 LINC00959A0A1B0GUT2 108 aa8.43□□□□□ -1.06
KNOP1-202ENST00000564480 GNG4P50150 75 aa8.43□□□□□ -1.06
KNOP1-202ENST00000564480 ZNF345Q14585 488 aa8.43□□□□□ -1.06
KNOP1-202ENST00000564480 TWIST1Q15672 202 aa8.43□□□□□ -1.06
KNOP1-202ENST00000564480 NUDT10Q8NFP7 164 aa8.43□□□□□ -1.06
KNOP1-202ENST00000564480 OR5A1Q8NGJ0 315 aa8.43□□□□□ -1.06
KNOP1-202ENST00000564480 NUDT11Q96G61 164 aa8.43□□□□□ -1.06
KNOP1-202ENST00000564480 CARD19Q96LW7 228 aa8.43□□□□□ -1.06
KNOP1-202ENST00000564480 CNFNQ9BYD5 112 aa8.43□□□□□ -1.06
KNOP1-202ENST00000564480 IGHV1-58A0A0C4DH39 117 aa8.42□□□□□ -1.06
KNOP1-202ENST00000564480 NCR2O95944 276 aa8.42□□□□□ -1.06
KNOP1-202ENST00000564480 PTTG1IPP53801 180 aa8.42□□□□□ -1.06
KNOP1-202ENST00000564480 MANBALQ9NQG1 85 aa8.42□□□□□ -1.06
KNOP1-202ENST00000564480 XKRY2A2RUG3 117 aa8.41□□□□□ -1.06
KNOP1-202ENST00000564480 SDHAF1A6NFY7 115 aa8.41□□□□□ -1.06
KNOP1-202ENST00000564480 H7C423 109 aa8.41□□□□□ -1.06
KNOP1-202ENST00000564480 APCSP02743 223 aa8.41□□□□□ -1.06
KNOP1-202ENST00000564480 SYCNQ0VAF6 134 aa8.41□□□□□ -1.06
KNOP1-202ENST00000564480 TRAV1-1A0A0B4J248 108 aa8.4□□□□□ -1.06
KNOP1-202ENST00000564480 BCL2L11O43521 198 aa8.4□□□□□ -1.06
KNOP1-202ENST00000564480 ESDP10768 282 aa8.4□□□□□ -1.06
KNOP1-202ENST00000564480 GAGE2BQ13066 116 aa8.4□□□□□ -1.06
KNOP1-202ENST00000564480 SMIM12Q96EX1 92 aa8.4□□□□□ -1.06
KNOP1-202ENST00000564480 PSORS1C2Q9UIG4 136 aa8.4□□□□□ -1.06
KNOP1-202ENST00000564480 BCL2P10415 239 aa8.39□□□□□ -1.07
KNOP1-202ENST00000564480 RNASE7Q9H1E1 156 aaKnown RBP8.39□□□□□ -1.07
KNOP1-202ENST00000564480 MED9Q9NWA0 146 aa8.39□□□□□ -1.07
KNOP1-202ENST00000564480 IGLV4-69A0A075B6H9 119 aa8.38□□□□□ -1.07
KNOP1-202ENST00000564480 HMSDA8MTL9 139 aa8.38□□□□□ -1.07
KNOP1-202ENST00000564480 K7EN84 100 aa8.38□□□□□ -1.07
KNOP1-202ENST00000564480 TSHBP01222 138 aa8.38□□□□□ -1.07
KNOP1-202ENST00000564480 ZNF25P17030 456 aaPredicted RBP8.38□□□□□ -1.07
KNOP1-202ENST00000564480 MEF2BQ02080 365 aaPredicted RBP8.38□□□□□ -1.07
KNOP1-202ENST00000564480 PRR26Q8N8Z3 221 aa8.38□□□□□ -1.07
KNOP1-202ENST00000564480 CDC42SE2Q9NRR3 84 aa8.38□□□□□ -1.07
KNOP1-202ENST00000564480 I3L3M4 83 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms