RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 C20orf203Q8NBC4 194 aa13.04□□□□□ -0.32
SHCBP1-203ENST00000564272 RPL39LQ96EH5 51 aaKnown RBP13.04□□□□□ -0.32
SHCBP1-203ENST00000564272 IGLV4-60A0A075B6I1 120 aa13.03□□□□□ -0.32
SHCBP1-203ENST00000564272 ZNF727A8MUV8 499 aa13.03□□□□□ -0.32
SHCBP1-203ENST00000564272 NDUFS6O75380 124 aaKnown RBP13.03□□□□□ -0.32
SHCBP1-203ENST00000564272 AMTP48728 403 aa13.03□□□□□ -0.32
SHCBP1-203ENST00000564272 REG3AQ06141 175 aa13.03□□□□□ -0.32
SHCBP1-203ENST00000564272 COTL1Q14019 142 aa13.03□□□□□ -0.32
SHCBP1-203ENST00000564272 C14orf177Q52M58 125 aa13.03□□□□□ -0.32
SHCBP1-203ENST00000564272 KRTAP26-1Q6PEX3 210 aa13.03□□□□□ -0.32
SHCBP1-203ENST00000564272 SMIM15Q7Z3B0 74 aa13.03□□□□□ -0.32
SHCBP1-203ENST00000564272 GFRA4Q9GZZ7 299 aa13.03□□□□□ -0.32
SHCBP1-203ENST00000564272 FAM229AH3BQW9 127 aa13.02□□□□□ -0.33
SHCBP1-203ENST00000564272 IGLV10-54A0A075B6I4 117 aa13.01□□□□□ -0.33
SHCBP1-203ENST00000564272 A0A1B0GUV1 79 aa13□□□□□ -0.33
SHCBP1-203ENST00000564272 UBE2L6O14933 153 aa13□□□□□ -0.33
SHCBP1-203ENST00000564272 TSKUQ8WUA8 353 aa13□□□□□ -0.33
SHCBP1-203ENST00000564272 SCXQ7RTU7 201 aa12.99□□□□□ -0.33
SHCBP1-203ENST00000564272 BORCS7Q96B45 105 aa12.99□□□□□ -0.33
SHCBP1-203ENST00000564272 OSTCQ9NRP0 149 aa12.99□□□□□ -0.33
SHCBP1-203ENST00000564272 HIGD1CA8MV81 97 aa12.98□□□□□ -0.33
SHCBP1-203ENST00000564272 PRSS1P07477 247 aa12.98□□□□□ -0.33
SHCBP1-203ENST00000564272 GAS8-AS1O95177 125 aa12.97□□□□□ -0.33
SHCBP1-203ENST00000564272 SRRM2Q9UQ35 2752 aaKnown RBP12.96□□□□□ -0.33
SHCBP1-203ENST00000564272 A0A1B0GUT8 65 aa12.96□□□□□ -0.33
SHCBP1-203ENST00000564272 SDHAF1A6NFY7 115 aa12.96□□□□□ -0.33
SHCBP1-203ENST00000564272 C9JQL5 133 aa12.96□□□□□ -0.33
SHCBP1-203ENST00000564272 TEX261Q6UWH6 196 aa12.96□□□□□ -0.33
SHCBP1-203ENST00000564272 LINC00528Q8N1L1 170 aa12.96□□□□□ -0.33
SHCBP1-203ENST00000564272 V9GYV3 84 aa12.96□□□□□ -0.33
SHCBP1-203ENST00000564272 ISOC2Q96AB3 205 aa12.95□□□□□ -0.34
SHCBP1-203ENST00000564272 FLG2Q5D862 2391 aaPredicted RBP12.95□□□□□ -0.34
SHCBP1-203ENST00000564272 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.94□□□□□ -0.34
SHCBP1-203ENST00000564272 TRAV8-4A0A0B4J246 113 aa12.94□□□□□ -0.34
SHCBP1-203ENST00000564272 IGKV2-29A2NJV5 120 aaPredicted RBP12.94□□□□□ -0.34
SHCBP1-203ENST00000564272 NCR2O95944 276 aa12.94□□□□□ -0.34
SHCBP1-203ENST00000564272 APCSP02743 223 aa12.94□□□□□ -0.34
SHCBP1-203ENST00000564272 RPL23P62829 140 aaKnown RBP12.94□□□□□ -0.34
SHCBP1-203ENST00000564272 SRSF3P84103 164 aaKnown RBP12.94□□□□□ -0.34
SHCBP1-203ENST00000564272 TMEM241Q24JQ0 296 aa12.94□□□□□ -0.34
SHCBP1-203ENST00000564272 RNF185Q96GF1 192 aa12.94□□□□□ -0.34
SHCBP1-203ENST00000564272 CHAC1Q9BUX1 264 aa12.94□□□□□ -0.34
SHCBP1-203ENST00000564272 TMEM191AQ9H0A3 160 aa12.94□□□□□ -0.34
SHCBP1-203ENST00000564272 FAM231BA6NCW3 169 aa12.93□□□□□ -0.34
SHCBP1-203ENST00000564272 IGKV3OR2-268A0A0C4DH90 116 aa12.92□□□□□ -0.34
SHCBP1-203ENST00000564272 TRBV6-5A0A0K0K1A5 114 aa12.92□□□□□ -0.34
SHCBP1-203ENST00000564272 ADIRFQ15847 76 aa12.92□□□□□ -0.34
SHCBP1-203ENST00000564272 FAM74A3Q4VXF1 159 aa12.92□□□□□ -0.34
SHCBP1-203ENST00000564272 AMMECR1LQ6DCA0 310 aa12.92□□□□□ -0.34
SHCBP1-203ENST00000564272 AMN1Q8IY45 258 aa12.92□□□□□ -0.34
SHCBP1-203ENST00000564272 CIRBP-AS1Q8TBR5 109 aa12.92□□□□□ -0.34
SHCBP1-203ENST00000564272 I3L3M4 83 aa12.91□□□□□ -0.34
SHCBP1-203ENST00000564272 PMCHP20382 165 aa12.91□□□□□ -0.34
SHCBP1-203ENST00000564272 RPS10P46783 165 aaKnown RBP12.91□□□□□ -0.34
SHCBP1-203ENST00000564272 NUP35Q8NFH5 326 aa12.91□□□□□ -0.34
SHCBP1-203ENST00000564272 NAT8Q9UHE5 227 aa12.91□□□□□ -0.34
SHCBP1-203ENST00000564272 PLA2G1BP04054 148 aaKnown RBP12.9□□□□□ -0.34
SHCBP1-203ENST00000564272 FGF6P10767 208 aa12.9□□□□□ -0.34
SHCBP1-203ENST00000564272 RAB4AP20338 218 aa12.9□□□□□ -0.34
SHCBP1-203ENST00000564272 DGAT2L7PQ6IED9 249 aa12.9□□□□□ -0.34
SHCBP1-203ENST00000564272 RNASEKQ6P5S7 137 aaKnown RBP12.9□□□□□ -0.34
SHCBP1-203ENST00000564272 ST20Q9HBF5 79 aa12.9□□□□□ -0.34
SHCBP1-203ENST00000564272 TMEM242Q9NWH2 141 aa12.9□□□□□ -0.34
SHCBP1-203ENST00000564272 MYCBP2O75592 4640 aa12.89□□□□□ -0.35
SHCBP1-203ENST00000564272 hDV102S1A0JD36 115 aa12.89□□□□□ -0.35
SHCBP1-203ENST00000564272 SMKR1H3BMG3 65 aa12.89□□□□□ -0.35
SHCBP1-203ENST00000564272 TSHBP01222 138 aa12.89□□□□□ -0.35
SHCBP1-203ENST00000564272 RIGQ13278 110 aa12.89□□□□□ -0.35
SHCBP1-203ENST00000564272 PEA15Q15121 130 aa12.89□□□□□ -0.35
SHCBP1-203ENST00000564272 C9orf163Q8N9P6 203 aa12.89□□□□□ -0.35
SHCBP1-203ENST00000564272 CLRN3Q8NCR9 226 aa12.89□□□□□ -0.35
SHCBP1-203ENST00000564272 MRAP2Q96G30 205 aa12.89□□□□□ -0.35
SHCBP1-203ENST00000564272 GAGE12HA6NDE8 117 aa12.88□□□□□ -0.35
SHCBP1-203ENST00000564272 H7C423 109 aa12.88□□□□□ -0.35
SHCBP1-203ENST00000564272 NAT8BQ9UHF3 227 aa12.88□□□□□ -0.35
SHCBP1-203ENST00000564272 DMBT1Q9UGM3 2413 aaPredicted RBP12.87□□□□□ -0.35
SHCBP1-203ENST00000564272 POLR2KP53803 58 aaKnown RBP12.86□□□□□ -0.35
SHCBP1-203ENST00000564272 ESDP10768 282 aa12.85□□□□□ -0.35
SHCBP1-203ENST00000564272 CNBPP62633 177 aaKnown RBP12.85□□□□□ -0.35
SHCBP1-203ENST00000564272 CHCHD10Q8WYQ3 142 aaPredicted RBP12.85□□□□□ -0.35
SHCBP1-203ENST00000564272 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.85□□□□□ -0.35
SHCBP1-203ENST00000564272 TRBV27A0A0K0K1C4 114 aa12.84□□□□□ -0.35
SHCBP1-203ENST00000564272 SMIM27A0A1W2PRY6 76 aa12.84□□□□□ -0.35
SHCBP1-203ENST00000564272 PANO1I0J062 215 aa12.84□□□□□ -0.35
SHCBP1-203ENST00000564272 SLPIP03973 132 aa12.84□□□□□ -0.35
SHCBP1-203ENST00000564272 ZNF25P17030 456 aaPredicted RBP12.84□□□□□ -0.35
SHCBP1-203ENST00000564272 C15orf56Q8N910 161 aa12.84□□□□□ -0.35
SHCBP1-203ENST00000564272 SMDT1Q9H4I9 107 aa12.84□□□□□ -0.35
SHCBP1-203ENST00000564272 HERC1Q15751 4861 aa12.83□□□□□ -0.36
SHCBP1-203ENST00000564272 SDIM1Q6ZPB5 146 aa12.83□□□□□ -0.36
SHCBP1-203ENST00000564272 NRACQ8N912 160 aa12.83□□□□□ -0.36
SHCBP1-203ENST00000564272 BTF3L4Q96K17 158 aa12.83□□□□□ -0.36
SHCBP1-203ENST00000564272 AP5S1Q9NUS5 200 aa12.83□□□□□ -0.36
SHCBP1-203ENST00000564272 KRTAP10-4P60372 401 aaPredicted RBP12.82□□□□□ -0.36
SHCBP1-203ENST00000564272 OR5A1Q8NGJ0 315 aa12.82□□□□□ -0.36
SHCBP1-203ENST00000564272 TMEM101Q96IK0 257 aa12.82□□□□□ -0.36
SHCBP1-203ENST00000564272 C7orf77A4D0Y5 90 aa12.81□□□□□ -0.36
SHCBP1-203ENST00000564272 CAMPP49913 170 aa12.81□□□□□ -0.36
SHCBP1-203ENST00000564272 MRPL51Q4U2R6 128 aaKnown RBP12.81□□□□□ -0.36
SHCBP1-203ENST00000564272 HIGD2BQ4VC39 106 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms