RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 PKHD1L1Q86WI1 4243 aa10.74□□□□□ -0.69
CCNF-203ENST00000564236 IGLV4-60A0A075B6I1 120 aa10.74□□□□□ -0.69
CCNF-203ENST00000564236 SLC51BQ86UW2 128 aa10.74□□□□□ -0.69
CCNF-203ENST00000564236 NUDT10Q8NFP7 164 aa10.74□□□□□ -0.69
CCNF-203ENST00000564236 NUDT11Q96G61 164 aa10.74□□□□□ -0.69
CCNF-203ENST00000564236 GFRA4Q9GZZ7 299 aa10.73□□□□□ -0.69
CCNF-203ENST00000564236 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.73□□□□□ -0.69
CCNF-203ENST00000564236 RPL37AP61513 92 aaKnown RBP10.72□□□□□ -0.69
CCNF-203ENST00000564236 SERTAD4-AS1Q5TG53 156 aa10.72□□□□□ -0.69
CCNF-203ENST00000564236 IGLV10-54A0A075B6I4 117 aa10.71□□□□□ -0.69
CCNF-203ENST00000564236 PANO1I0J062 215 aa10.71□□□□□ -0.69
CCNF-203ENST00000564236 HMCN2Q8NDA2 5059 aa10.71□□□□□ -0.69
CCNF-203ENST00000564236 K7EN84 100 aa10.7□□□□□ -0.7
CCNF-203ENST00000564236 COTL1Q14019 142 aa10.7□□□□□ -0.7
CCNF-203ENST00000564236 RPP21Q9H633 154 aaKnown RBP10.7□□□□□ -0.7
CCNF-203ENST00000564236 SLPIP03973 132 aa10.69□□□□□ -0.7
CCNF-203ENST00000564236 GATD1Q8NB37 220 aa10.69□□□□□ -0.7
CCNF-203ENST00000564236 hDV102S1A0JD36 115 aa10.68□□□□□ -0.7
CCNF-203ENST00000564236 NCR2O95944 276 aa10.68□□□□□ -0.7
CCNF-203ENST00000564236 AMTP48728 403 aa10.68□□□□□ -0.7
CCNF-203ENST00000564236 HNRNPA3P51991 378 aaKnown RBP10.68□□□□□ -0.7
CCNF-203ENST00000564236 TWIST1Q15672 202 aa10.68□□□□□ -0.7
CCNF-203ENST00000564236 OCC1Q8TAD7 63 aa10.68□□□□□ -0.7
CCNF-203ENST00000564236 RNF185Q96GF1 192 aa10.68□□□□□ -0.7
CCNF-203ENST00000564236 RNASE7Q9H1E1 156 aaKnown RBP10.68□□□□□ -0.7
CCNF-203ENST00000564236 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.67□□□□□ -0.7
CCNF-203ENST00000564236 H7C423 109 aa10.67□□□□□ -0.7
CCNF-203ENST00000564236 UBE2L6O14933 153 aa10.67□□□□□ -0.7
CCNF-203ENST00000564236 GTSF1Q8WW33 167 aa10.67□□□□□ -0.7
CCNF-203ENST00000564236 IGHV3-64A0A075B6Q5 118 aa10.66□□□□□ -0.7
CCNF-203ENST00000564236 TMEM250H0YL14 139 aa10.66□□□□□ -0.7
CCNF-203ENST00000564236 TEX261Q6UWH6 196 aa10.66□□□□□ -0.7
CCNF-203ENST00000564236 LYPD6BQ8NI32 183 aa10.66□□□□□ -0.7
CCNF-203ENST00000564236 AP5S1Q9NUS5 200 aa10.66□□□□□ -0.7
CCNF-203ENST00000564236 TRAV26-2A0A0B4J265 109 aa10.65□□□□□ -0.7
CCNF-203ENST00000564236 FOXA3P55318 350 aaPredicted RBP10.65□□□□□ -0.7
CCNF-203ENST00000564236 FAM231DQ6ZW35 169 aa10.65□□□□□ -0.7
CCNF-203ENST00000564236 C15orf56Q8N910 161 aa10.65□□□□□ -0.7
CCNF-203ENST00000564236 SPACA4Q8TDM5 124 aa10.65□□□□□ -0.7
CCNF-203ENST00000564236 NDUFS6O75380 124 aaKnown RBP10.64□□□□□ -0.71
CCNF-203ENST00000564236 CT83Q5H943 113 aa10.64□□□□□ -0.71
CCNF-203ENST00000564236 CFAP161Q6P656 301 aa10.64□□□□□ -0.71
CCNF-203ENST00000564236 Q6ZNX1 250 aa10.64□□□□□ -0.71
CCNF-203ENST00000564236 FAM210AQ96ND0 272 aa10.64□□□□□ -0.71
CCNF-203ENST00000564236 TRBV6-5A0A0K0K1A5 114 aa10.63□□□□□ -0.71
CCNF-203ENST00000564236 Q6ZRU5 148 aa10.63□□□□□ -0.71
CCNF-203ENST00000564236 RPL39LQ96EH5 51 aaKnown RBP10.63□□□□□ -0.71
CCNF-203ENST00000564236 SMIM15Q7Z3B0 74 aa10.62□□□□□ -0.71
CCNF-203ENST00000564236 PLAC8Q9NZF1 115 aa10.62□□□□□ -0.71
CCNF-203ENST00000564236 A0A087WYN8 130 aa10.61□□□□□ -0.71
CCNF-203ENST00000564236 GAGE12HA6NDE8 117 aa10.61□□□□□ -0.71
CCNF-203ENST00000564236 SDHAF1A6NFY7 115 aa10.61□□□□□ -0.71
CCNF-203ENST00000564236 A8MWL6 223 aa10.61□□□□□ -0.71
CCNF-203ENST00000564236 ZNF25P17030 456 aaPredicted RBP10.61□□□□□ -0.71
CCNF-203ENST00000564236 BLOC1S1P78537 153 aa10.61□□□□□ -0.71
CCNF-203ENST00000564236 GVQW2A0A096LPI5 108 aaPredicted RBP10.6□□□□□ -0.71
CCNF-203ENST00000564236 GATCO43716 136 aaKnown RBP10.6□□□□□ -0.71
CCNF-203ENST00000564236 APCSP02743 223 aa10.6□□□□□ -0.71
CCNF-203ENST00000564236 CHCHD10Q8WYQ3 142 aaPredicted RBP10.6□□□□□ -0.71
CCNF-203ENST00000564236 FAM231BA6NCW3 169 aa10.59□□□□□ -0.71
CCNF-203ENST00000564236 MT1HL1P0DM35 61 aa10.59□□□□□ -0.71
CCNF-203ENST00000564236 FGF6P10767 208 aa10.59□□□□□ -0.71
CCNF-203ENST00000564236 ESDP10768 282 aa10.59□□□□□ -0.71
CCNF-203ENST00000564236 RPS10P46783 165 aaKnown RBP10.59□□□□□ -0.71
CCNF-203ENST00000564236 AMMECR1LQ6DCA0 310 aa10.59□□□□□ -0.71
CCNF-203ENST00000564236 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.58□□□□□ -0.72
CCNF-203ENST00000564236 IGKV2-29A2NJV5 120 aaPredicted RBP10.58□□□□□ -0.72
CCNF-203ENST00000564236 I3L3M4 83 aa10.58□□□□□ -0.72
CCNF-203ENST00000564236 CHTF8P0CG12 524 aa10.58□□□□□ -0.72
CCNF-203ENST00000564236 FOXI1Q12951 378 aa10.58□□□□□ -0.72
CCNF-203ENST00000564236 OR5A1Q8NGJ0 315 aa10.58□□□□□ -0.72
CCNF-203ENST00000564236 ALKAL2Q6UX46 152 aa10.57□□□□□ -0.72
CCNF-203ENST00000564236 RNASEKQ6P5S7 137 aaKnown RBP10.56□□□□□ -0.72
CCNF-203ENST00000564236 MRPL52Q86TS9 123 aaKnown RBP10.56□□□□□ -0.72
CCNF-203ENST00000564236 AKAP14Q86UN6 197 aa10.56□□□□□ -0.72
CCNF-203ENST00000564236 TSKUQ8WUA8 353 aa10.56□□□□□ -0.72
CCNF-203ENST00000564236 TMEM191AQ9H0A3 160 aa10.56□□□□□ -0.72
CCNF-203ENST00000564236 TRBV27A0A0K0K1C4 114 aa10.55□□□□□ -0.72
CCNF-203ENST00000564236 TSHBP01222 138 aa10.55□□□□□ -0.72
CCNF-203ENST00000564236 POLR2KP53803 58 aaKnown RBP10.55□□□□□ -0.72
CCNF-203ENST00000564236 COX6A2Q02221 97 aa10.55□□□□□ -0.72
CCNF-203ENST00000564236 LINC01551Q86U37 167 aa10.55□□□□□ -0.72
CCNF-203ENST00000564236 PLA2G2DQ9UNK4 145 aa10.55□□□□□ -0.72
CCNF-203ENST00000564236 IGKV3OR2-268A0A0C4DH90 116 aa10.54□□□□□ -0.72
CCNF-203ENST00000564236 A0A1B0GUT8 65 aa10.54□□□□□ -0.72
CCNF-203ENST00000564236 GAS8-AS1O95177 125 aa10.54□□□□□ -0.72
CCNF-203ENST00000564236 PMCHP20382 165 aa10.54□□□□□ -0.72
CCNF-203ENST00000564236 HIGD2BQ4VC39 106 aa10.54□□□□□ -0.72
CCNF-203ENST00000564236 PRSS3P2Q8NHM4 247 aa10.54□□□□□ -0.72
CCNF-203ENST00000564236 OSTCQ9NRP0 149 aa10.54□□□□□ -0.72
CCNF-203ENST00000564236 LINC00959A0A1B0GUT2 108 aa10.53□□□□□ -0.72
CCNF-203ENST00000564236 HIGD1CA8MV81 97 aa10.53□□□□□ -0.72
CCNF-203ENST00000564236 BORCS7Q96B45 105 aa10.53□□□□□ -0.72
CCNF-203ENST00000564236 DPH3Q96FX2 82 aa10.53□□□□□ -0.72
CCNF-203ENST00000564236 MRAP2Q96G30 205 aa10.53□□□□□ -0.72
CCNF-203ENST00000564236 TMEM101Q96IK0 257 aa10.53□□□□□ -0.72
CCNF-203ENST00000564236 BTF3L4Q96K17 158 aa10.53□□□□□ -0.72
CCNF-203ENST00000564236 ST20Q9HBF5 79 aa10.53□□□□□ -0.72
CCNF-203ENST00000564236 PHOX2AO14813 284 aa10.52□□□□□ -0.73
CCNF-203ENST00000564236 RAB4AP20338 218 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms