RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 PKDREJQ9NTG1 2253 aa4.72□□□□□ -1.65
CLK3-212ENST00000563418 FDCSPQ8NFU4 85 aa4.72□□□□□ -1.65
CLK3-212ENST00000563418 RITA1Q96K30 269 aa4.72□□□□□ -1.65
CLK3-212ENST00000563418 ZNF503-AS2A6NEH8 195 aa4.72□□□□□ -1.65
CLK3-212ENST00000563418 K7EQD1 137 aa4.72□□□□□ -1.65
CLK3-212ENST00000563418 SPINK13Q1W4C9 94 aa4.72□□□□□ -1.65
CLK3-212ENST00000563418 CADP27708 2225 aa4.71□□□□□ -1.65
CLK3-212ENST00000563418 IGIPA6NJ69 53 aa4.71□□□□□ -1.65
CLK3-212ENST00000563418 LY6EQ16553 131 aa4.71□□□□□ -1.66
CLK3-212ENST00000563418 SOSTDC1Q6X4U4 206 aa4.71□□□□□ -1.66
CLK3-212ENST00000563418 NOTCH4Q99466 2003 aa4.71□□□□□ -1.66
CLK3-212ENST00000563418 COX6B1P14854 86 aa4.71□□□□□ -1.66
CLK3-212ENST00000563418 NOTCH3Q9UM47 2321 aa4.71□□□□□ -1.66
CLK3-212ENST00000563418 SPTAN1Q13813 2472 aaKnown RBP4.71□□□□□ -1.66
CLK3-212ENST00000563418 MALRD1Q5VYJ5 2156 aa4.71□□□□□ -1.66
CLK3-212ENST00000563418 A0A087WVE0 104 aa4.71□□□□□ -1.66
CLK3-212ENST00000563418 DCANP1Q8TF63 244 aa4.71□□□□□ -1.66
CLK3-212ENST00000563418 ZNRD1Q9P1U0 126 aa4.71□□□□□ -1.66
CLK3-212ENST00000563418 OVOL3O00110 214 aa4.7□□□□□ -1.66
CLK3-212ENST00000563418 FAM19A4Q96LR4 140 aa4.7□□□□□ -1.66
CLK3-212ENST00000563418 TRBV10-1A0A0K0K1A3 114 aa4.7□□□□□ -1.66
CLK3-212ENST00000563418 TMEM89A2RUT3 159 aa4.7□□□□□ -1.66
CLK3-212ENST00000563418 SAA4P35542 130 aa4.7□□□□□ -1.66
CLK3-212ENST00000563418 TET2Q6N021 2002 aaPredicted RBP4.7□□□□□ -1.66
CLK3-212ENST00000563418 FAM27E3Q08E93 113 aa4.7□□□□□ -1.66
CLK3-212ENST00000563418 SERTAD4-AS1Q5TG53 156 aa4.7□□□□□ -1.66
CLK3-212ENST00000563418 ERC2-IT1O76042 136 aa4.7□□□□□ -1.66
CLK3-212ENST00000563418 CACNA1HO95180 2353 aa4.7□□□□□ -1.66
CLK3-212ENST00000563418 IGLV2-18A0A075B6J9 118 aa4.7□□□□□ -1.66
CLK3-212ENST00000563418 POM121L12Q8N7R1 296 aa4.7□□□□□ -1.66
CLK3-212ENST00000563418 MDS2Q8NDY4 140 aa4.7□□□□□ -1.66
CLK3-212ENST00000563418 IGHV3-38A0A0C4DH36 116 aa4.69□□□□□ -1.66
CLK3-212ENST00000563418 COX7BP24311 80 aa4.69□□□□□ -1.66
CLK3-212ENST00000563418 FHL3Q13643 280 aa4.69□□□□□ -1.66
CLK3-212ENST00000563418 BEAN1Q3B7T3 259 aa4.69□□□□□ -1.66
CLK3-212ENST00000563418 Q8N6K4 173 aa4.69□□□□□ -1.66
CLK3-212ENST00000563418 POLR2KP53803 58 aaKnown RBP4.69□□□□□ -1.66
CLK3-212ENST00000563418 PSMG3-AS1Q96PY0 264 aa4.69□□□□□ -1.66
CLK3-212ENST00000563418 VWCEQ96DN2 955 aa4.69□□□□□ -1.66
CLK3-212ENST00000563418 PRR15Q8IV56 129 aa4.69□□□□□ -1.66
CLK3-212ENST00000563418 CACNA1EQ15878 2313 aa4.69□□□□□ -1.66
CLK3-212ENST00000563418 M0QY20 66 aa4.69□□□□□ -1.66
CLK3-212ENST00000563418 PRAC2D3DTV9 90 aa4.69□□□□□ -1.66
CLK3-212ENST00000563418 ARRDC1-AS1Q9H2J1 176 aa4.69□□□□□ -1.66
CLK3-212ENST00000563418 LINC00336Q6ZUF6 198 aa4.68□□□□□ -1.66
CLK3-212ENST00000563418 ADAMTS20P59510 1910 aa4.68□□□□□ -1.66
CLK3-212ENST00000563418 COX17Q14061 63 aa4.68□□□□□ -1.66
CLK3-212ENST00000563418 Q8N3U1 123 aa4.68□□□□□ -1.66
CLK3-212ENST00000563418 LYPD2Q6UXB3 125 aa4.68□□□□□ -1.66
CLK3-212ENST00000563418 CEMP1Q6PRD7 247 aaPredicted RBP4.68□□□□□ -1.66
CLK3-212ENST00000563418 CDKN2A-AS1Q9UH64 79 aa4.68□□□□□ -1.66
CLK3-212ENST00000563418 Q0VFX4 171 aa4.68□□□□□ -1.66
CLK3-212ENST00000563418 UBE2D4Q9Y2X8 147 aa4.68□□□□□ -1.66
CLK3-212ENST00000563418 E7EUB6 86 aa4.67□□□□□ -1.66
CLK3-212ENST00000563418 CGB3P0DN86 165 aa4.67□□□□□ -1.66
CLK3-212ENST00000563418 CGB7P0DN87 165 aa4.67□□□□□ -1.66
CLK3-212ENST00000563418 PSPHP1O15172 72 aa4.67□□□□□ -1.66
CLK3-212ENST00000563418 CD164L2Q6UWJ8 174 aa4.67□□□□□ -1.66
CLK3-212ENST00000563418 KLKP1Q107X0 134 aa4.67□□□□□ -1.66
CLK3-212ENST00000563418 ZNF672Q499Z4 452 aaPredicted RBP4.67□□□□□ -1.66
CLK3-212ENST00000563418 LINC00846Q9NV44 126 aa4.67□□□□□ -1.66
CLK3-212ENST00000563418 NTM-AS1Q6ZSK4 140 aa4.67□□□□□ -1.66
CLK3-212ENST00000563418 SMIM11BQ8TCY0 68 aa4.67□□□□□ -1.66
CLK3-212ENST00000563418 PRB1P04280 392 aa4.67□□□□□ -1.66
CLK3-212ENST00000563418 TSHBP01222 138 aa4.67□□□□□ -1.66
CLK3-212ENST00000563418 KTN1-AS1Q86SY8 53 aa4.67□□□□□ -1.66
CLK3-212ENST00000563418 TRIOBPQ9H2D6 2365 aa4.66□□□□□ -1.66
CLK3-212ENST00000563418 IGHV3-16A0A0C4DH30 117 aa4.66□□□□□ -1.66
CLK3-212ENST00000563418 COL4A6Q14031 1691 aa4.66□□□□□ -1.66
CLK3-212ENST00000563418 NCOR1O75376 2440 aa4.66□□□□□ -1.66
CLK3-212ENST00000563418 TSPEAR-AS2P59090 65 aa4.66□□□□□ -1.66
CLK3-212ENST00000563418 LRP4O75096 1905 aa4.66□□□□□ -1.66
CLK3-212ENST00000563418 K7EMT4 169 aa4.66□□□□□ -1.66
CLK3-212ENST00000563418 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.66□□□□□ -1.66
CLK3-212ENST00000563418 IGHV3-53P01767 116 aa4.66□□□□□ -1.66
CLK3-212ENST00000563418 PLA2G5P39877 138 aa4.66□□□□□ -1.66
CLK3-212ENST00000563418 CCL24O00175 119 aa4.66□□□□□ -1.66
CLK3-212ENST00000563418 SPAG11BQ08648 103 aa4.66□□□□□ -1.66
CLK3-212ENST00000563418 Q8N814 137 aa4.66□□□□□ -1.66
CLK3-212ENST00000563418 RMI2Q96E14 147 aa4.66□□□□□ -1.66
CLK3-212ENST00000563418 WFDC10AQ9H1F0 79 aa4.65□□□□□ -1.66
CLK3-212ENST00000563418 CELA1Q9UNI1 258 aa4.65□□□□□ -1.66
CLK3-212ENST00000563418 LINC01547P58512 204 aaPredicted RBP4.65□□□□□ -1.66
CLK3-212ENST00000563418 RAI1Q7Z5J4 1906 aaPredicted RBP4.65□□□□□ -1.67
CLK3-212ENST00000563418 BRI3O95415 125 aa4.65□□□□□ -1.67
CLK3-212ENST00000563418 FHL2Q14192 279 aa4.65□□□□□ -1.67
CLK3-212ENST00000563418 DEFB131AP59861 70 aa4.65□□□□□ -1.67
CLK3-212ENST00000563418 ZFAND3Q9H8U3 227 aa4.65□□□□□ -1.67
CLK3-212ENST00000563418 LINC01600Q96MT4 127 aa4.65□□□□□ -1.67
CLK3-212ENST00000563418 hDV103S1A0JD37 113 aa4.64□□□□□ -1.67
CLK3-212ENST00000563418 PRB2P02812 416 aaPredicted RBP4.64□□□□□ -1.67
CLK3-212ENST00000563418 ZFAND2AQ8N6M9 145 aa4.64□□□□□ -1.67
CLK3-212ENST00000563418 CYP4F30PQ9H0H9 118 aa4.64□□□□□ -1.67
CLK3-212ENST00000563418 EDN2P20800 178 aa4.64□□□□□ -1.67
CLK3-212ENST00000563418 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.64□□□□□ -1.674e-6■■□□□ 13.3
CLK3-212ENST00000563418 IGLV1-47P01700 117 aa4.64□□□□□ -1.67
CLK3-212ENST00000563418 SLPIP03973 132 aa4.64□□□□□ -1.67
CLK3-212ENST00000563418 IGHV7-81A0A0B4J1V7 117 aa4.64□□□□□ -1.67
CLK3-212ENST00000563418 AMELXQ99217 191 aa4.64□□□□□ -1.67
CLK3-212ENST00000563418 K7ERS5 55 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms