RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 IGHV1-24A0A0C4DH33 117 aa5.68□□□□□ -1.5
UBR1-204ENST00000563239 SDHAF1A6NFY7 115 aa5.68□□□□□ -1.5
UBR1-204ENST00000563239 TMEM262E9PQX1 116 aa5.68□□□□□ -1.5
UBR1-204ENST00000563239 PPP1R2P9O14990 202 aa5.68□□□□□ -1.5
UBR1-204ENST00000563239 FUSP35637 526 aaKnown RBP eCLIP5.68□□□□□ -1.5
UBR1-204ENST00000563239 CAMPP49913 170 aa5.68□□□□□ -1.5
UBR1-204ENST00000563239 POLR2KP53803 58 aaKnown RBP5.68□□□□□ -1.5
UBR1-204ENST00000563239 RBX1P62877 108 aa5.68□□□□□ -1.5
UBR1-204ENST00000563239 GAGE6Q13070 117 aa5.68□□□□□ -1.5
UBR1-204ENST00000563239 MRPL51Q4U2R6 128 aaKnown RBP5.68□□□□□ -1.5
UBR1-204ENST00000563239 FAM104BQ5XKR9 115 aa5.68□□□□□ -1.5
UBR1-204ENST00000563239 ENHOQ6UWT2 76 aa5.68□□□□□ -1.5
UBR1-204ENST00000563239 SPATA12Q7Z6I5 190 aa5.68□□□□□ -1.5
UBR1-204ENST00000563239 NRACQ8N912 160 aa5.68□□□□□ -1.5
UBR1-204ENST00000563239 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.68□□□□□ -1.5
UBR1-204ENST00000563239 ANAPC16Q96DE5 110 aa5.68□□□□□ -1.5
UBR1-204ENST00000563239 MRAP2Q96G30 205 aa5.68□□□□□ -1.5
UBR1-204ENST00000563239 TRAV8-3A0A0A6YYJ7 113 aa5.67□□□□□ -1.5
UBR1-204ENST00000563239 A0A1B0GW15 77 aa5.67□□□□□ -1.5
UBR1-204ENST00000563239 F8W036 122 aa5.67□□□□□ -1.5
UBR1-204ENST00000563239 NCR2O95944 276 aa5.67□□□□□ -1.5
UBR1-204ENST00000563239 MT-ND4LP03901 98 aa5.67□□□□□ -1.5
UBR1-204ENST00000563239 WFDC2Q14508 124 aa5.67□□□□□ -1.5
UBR1-204ENST00000563239 C10orf91Q5T1B1 145 aa5.67□□□□□ -1.5
UBR1-204ENST00000563239 LCE2AQ5TA79 106 aaPredicted RBP5.67□□□□□ -1.5
UBR1-204ENST00000563239 MRPL54Q6P161 138 aaKnown RBP5.67□□□□□ -1.5
UBR1-204ENST00000563239 KCNIP4Q6PIL6 250 aa5.67□□□□□ -1.5
UBR1-204ENST00000563239 UBE2WQ96B02 151 aa5.67□□□□□ -1.5
UBR1-204ENST00000563239 TMEM243Q9BU79 118 aa5.67□□□□□ -1.5
UBR1-204ENST00000563239 TMEM70Q9BUB7 260 aa5.67□□□□□ -1.5
UBR1-204ENST00000563239 SEC11CQ9BY50 192 aa5.67□□□□□ -1.5
UBR1-204ENST00000563239 PRR34Q9NV39 138 aa5.67□□□□□ -1.5
UBR1-204ENST00000563239 URGCP-MRPS24S4R325 110 aa5.67□□□□□ -1.5
UBR1-204ENST00000563239 HSPG2P98160 4391 aa5.67□□□□□ -1.5
UBR1-204ENST00000563239 IGLV4-60A0A075B6I1 120 aa5.66□□□□□ -1.5
UBR1-204ENST00000563239 TSHBP01222 138 aa5.66□□□□□ -1.5
UBR1-204ENST00000563239 HBBP68871 147 aa5.66□□□□□ -1.5
UBR1-204ENST00000563239 COTL1Q14019 142 aa5.66□□□□□ -1.5
UBR1-204ENST00000563239 ELOBQ15370 118 aa5.66□□□□□ -1.5
UBR1-204ENST00000563239 KRTAP26-1Q6PEX3 210 aa5.66□□□□□ -1.5
UBR1-204ENST00000563239 C20orf203Q8NBC4 194 aa5.66□□□□□ -1.5
UBR1-204ENST00000563239 ST20Q9HBF5 79 aa5.66□□□□□ -1.5
UBR1-204ENST00000563239 TRBV27A0A0K0K1C4 114 aa5.65□□□□□ -1.5
UBR1-204ENST00000563239 A0A1B0GUV1 79 aa5.65□□□□□ -1.5
UBR1-204ENST00000563239 C16orf90A8MZG2 172 aa5.65□□□□□ -1.5
UBR1-204ENST00000563239 I3L3M4 83 aa5.65□□□□□ -1.5
UBR1-204ENST00000563239 ANGP03950 147 aaKnown RBP5.65□□□□□ -1.5
UBR1-204ENST00000563239 ESDP10768 282 aa5.65□□□□□ -1.5
UBR1-204ENST00000563239 AMTP48728 403 aa5.65□□□□□ -1.5
UBR1-204ENST00000563239 PKIAP61925 76 aa5.65□□□□□ -1.5
UBR1-204ENST00000563239 ATP5L2Q7Z4Y8 100 aa5.65□□□□□ -1.5
UBR1-204ENST00000563239 LINC00269Q8N2A0 174 aa5.65□□□□□ -1.5
UBR1-204ENST00000563239 TM2D2Q9BX73 214 aa5.65□□□□□ -1.5
UBR1-204ENST00000563239 TMEM242Q9NWH2 141 aa5.65□□□□□ -1.5
UBR1-204ENST00000563239 DNAH8Q96JB1 4490 aa5.64□□□□□ -1.51
UBR1-204ENST00000563239 TRBV24-1A0A075B6N3 115 aa5.64□□□□□ -1.51
UBR1-204ENST00000563239 IGKV2D-24A0A075B6R9 120 aa5.64□□□□□ -1.51
UBR1-204ENST00000563239 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.64□□□□□ -1.51
UBR1-204ENST00000563239 IGKV2-29A2NJV5 120 aaPredicted RBP5.64□□□□□ -1.51
UBR1-204ENST00000563239 FAM229AH3BQW9 127 aa5.64□□□□□ -1.51
UBR1-204ENST00000563239 PSCAO43653 123 aa5.64□□□□□ -1.51
UBR1-204ENST00000563239 EIF4EBP3O60516 100 aaPredicted RBP5.64□□□□□ -1.51
UBR1-204ENST00000563239 PMCHP20382 165 aa5.64□□□□□ -1.51
UBR1-204ENST00000563239 SUMO2P61956 95 aaKnown RBP5.64□□□□□ -1.51
UBR1-204ENST00000563239 Q0VG73 95 aa5.64□□□□□ -1.51
UBR1-204ENST00000563239 BAALCQ8WXS3 180 aa5.64□□□□□ -1.51
UBR1-204ENST00000563239 IMMP2LQ96T52 175 aa5.64□□□□□ -1.51
UBR1-204ENST00000563239 CARHSP1Q9Y2V2 147 aaKnown RBP5.64□□□□□ -1.51
UBR1-204ENST00000563239 D6R8Y8 96 aa5.63□□□□□ -1.51
UBR1-204ENST00000563239 VCYO14598 125 aa5.63□□□□□ -1.51
UBR1-204ENST00000563239 LECT2O14960 151 aa5.63□□□□□ -1.51
UBR1-204ENST00000563239 TNFRSF6BO95407 300 aa5.63□□□□□ -1.51
UBR1-204ENST00000563239 APCSP02743 223 aa5.63□□□□□ -1.51
UBR1-204ENST00000563239 S100A8P05109 93 aa5.63□□□□□ -1.51
UBR1-204ENST00000563239 CKS2P33552 79 aa5.63□□□□□ -1.51
UBR1-204ENST00000563239 RPL32P62910 135 aaKnown RBP5.63□□□□□ -1.51
UBR1-204ENST00000563239 CLPSL2Q6UWE3 100 aa5.63□□□□□ -1.51
UBR1-204ENST00000563239 Q8N814 137 aa5.63□□□□□ -1.51
UBR1-204ENST00000563239 CTDSP1Q9GZU7 261 aa5.63□□□□□ -1.51
UBR1-204ENST00000563239 HERC1Q15751 4861 aa5.63□□□□□ -1.51
UBR1-204ENST00000563239 C7orf77A4D0Y5 90 aa5.62□□□□□ -1.51
UBR1-204ENST00000563239 H7C423 109 aa5.62□□□□□ -1.51
UBR1-204ENST00000563239 UBE2L6O14933 153 aa5.62□□□□□ -1.51
UBR1-204ENST00000563239 PPP1R17O96001 155 aa5.62□□□□□ -1.51
UBR1-204ENST00000563239 NPYP01303 97 aa5.62□□□□□ -1.51
UBR1-204ENST00000563239 FGF6P10767 208 aa5.62□□□□□ -1.51
UBR1-204ENST00000563239 KRTAP10-1P60331 282 aa5.62□□□□□ -1.51
UBR1-204ENST00000563239 REG3AQ06141 175 aa5.62□□□□□ -1.51
UBR1-204ENST00000563239 MIAQ16674 131 aa5.62□□□□□ -1.51
UBR1-204ENST00000563239 CLRN3Q8NCR9 226 aa5.62□□□□□ -1.51
UBR1-204ENST00000563239 RMI2Q96E14 147 aa5.62□□□□□ -1.51
UBR1-204ENST00000563239 BTF3L4Q96K17 158 aa5.62□□□□□ -1.51
UBR1-204ENST00000563239 C20orf78Q9BR46 151 aa5.62□□□□□ -1.51
UBR1-204ENST00000563239 COX11Q9Y6N1 276 aa5.62□□□□□ -1.51
UBR1-204ENST00000563239 CRPP02741 224 aa5.61□□□□□ -1.51
UBR1-204ENST00000563239 PPBPP02775 128 aa5.61□□□□□ -1.51
UBR1-204ENST00000563239 CDPF1Q6NVV7 123 aa5.61□□□□□ -1.51
UBR1-204ENST00000563239 TMEM136Q6ZRR5 245 aa5.61□□□□□ -1.51
UBR1-204ENST00000563239 C1orf43Q9BWL3 253 aa5.61□□□□□ -1.51
UBR1-204ENST00000563239 IGLV10-54A0A075B6I4 117 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms