RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 FUSP35637 526 aaKnown RBP eCLIP12.37□□□□□ -0.43
CDH11-206ENST00000562998 COTL1Q14019 142 aa12.37□□□□□ -0.43
CDH11-206ENST00000562998 WFDC2Q14508 124 aa12.37□□□□□ -0.43
CDH11-206ENST00000562998 A0A1B0GW15 77 aa12.36□□□□□ -0.43
CDH11-206ENST00000562998 A0A1B0GXF2 115 aa12.36□□□□□ -0.43
CDH11-206ENST00000562998 CDK2AP2O75956 126 aa12.36□□□□□ -0.43
CDH11-206ENST00000562998 NCR2O95944 276 aa12.36□□□□□ -0.43
CDH11-206ENST00000562998 RPS10P46783 165 aaKnown RBP12.36□□□□□ -0.43
CDH11-206ENST00000562998 UQCC3Q6UW78 93 aa12.36□□□□□ -0.43
CDH11-206ENST00000562998 Q8N814 137 aa12.36□□□□□ -0.43
CDH11-206ENST00000562998 DEFB104AQ8WTQ1 72 aa12.36□□□□□ -0.43
CDH11-206ENST00000562998 RMI2Q96E14 147 aa12.36□□□□□ -0.43
CDH11-206ENST00000562998 PPP1R2P9O14990 202 aa12.35□□□□□ -0.43
CDH11-206ENST00000562998 ANGP03950 147 aaKnown RBP12.35□□□□□ -0.43
CDH11-206ENST00000562998 POLR2KP53803 58 aaKnown RBP12.35□□□□□ -0.43
CDH11-206ENST00000562998 FAM104BQ5XKR9 115 aa12.35□□□□□ -0.43
CDH11-206ENST00000562998 C20orf203Q8NBC4 194 aa12.35□□□□□ -0.43
CDH11-206ENST00000562998 TMEM70Q9BUB7 260 aa12.35□□□□□ -0.43
CDH11-206ENST00000562998 AMTP48728 403 aa12.34□□□□□ -0.43
CDH11-206ENST00000562998 IGLV4-60A0A075B6I1 120 aa12.33□□□□□ -0.44
CDH11-206ENST00000562998 IGKV2D-24A0A075B6R9 120 aa12.33□□□□□ -0.44
CDH11-206ENST00000562998 ADCYAP1P18509 176 aa12.33□□□□□ -0.44
CDH11-206ENST00000562998 KRTAP26-1Q6PEX3 210 aa12.33□□□□□ -0.44
CDH11-206ENST00000562998 NRACQ8N912 160 aa12.33□□□□□ -0.44
CDH11-206ENST00000562998 NTN5Q8WTR8 489 aaPredicted RBP12.33□□□□□ -0.44
CDH11-206ENST00000562998 TRBV27A0A0K0K1C4 114 aa12.32□□□□□ -0.44
CDH11-206ENST00000562998 TMEM218A2RU14 115 aa12.32□□□□□ -0.44
CDH11-206ENST00000562998 I3L3M4 83 aa12.32□□□□□ -0.44
CDH11-206ENST00000562998 CAMPP49913 170 aa12.32□□□□□ -0.44
CDH11-206ENST00000562998 MIAQ16674 131 aa12.32□□□□□ -0.44
CDH11-206ENST00000562998 MRPL51Q4U2R6 128 aaKnown RBP12.32□□□□□ -0.44
CDH11-206ENST00000562998 LINC00269Q8N2A0 174 aa12.32□□□□□ -0.44
CDH11-206ENST00000562998 ANAPC16Q96DE5 110 aa12.32□□□□□ -0.44
CDH11-206ENST00000562998 ST20Q9HBF5 79 aa12.32□□□□□ -0.44
CDH11-206ENST00000562998 SMKR1H3BMG3 65 aa12.31□□□□□ -0.44
CDH11-206ENST00000562998 CRPP02741 224 aa12.31□□□□□ -0.44
CDH11-206ENST00000562998 HBBP68871 147 aa12.31□□□□□ -0.44
CDH11-206ENST00000562998 BAALCQ8WXS3 180 aa12.31□□□□□ -0.44
CDH11-206ENST00000562998 LINC00862A6NCI5 91 aa12.3□□□□□ -0.44
CDH11-206ENST00000562998 H7C423 109 aa12.3□□□□□ -0.44
CDH11-206ENST00000562998 TSHBP01222 138 aa12.3□□□□□ -0.44
CDH11-206ENST00000562998 MT-ND4LP03901 98 aa12.3□□□□□ -0.44
CDH11-206ENST00000562998 ESDP10768 282 aa12.3□□□□□ -0.44
CDH11-206ENST00000562998 MRPL54Q6P161 138 aaKnown RBP12.3□□□□□ -0.44
CDH11-206ENST00000562998 ATP5L2Q7Z4Y8 100 aa12.3□□□□□ -0.44
CDH11-206ENST00000562998 C1orf43Q9BWL3 253 aa12.3□□□□□ -0.44
CDH11-206ENST00000562998 PPP1R17O96001 155 aa12.29□□□□□ -0.44
CDH11-206ENST00000562998 APCSP02743 223 aa12.29□□□□□ -0.44
CDH11-206ENST00000562998 PMCHP20382 165 aa12.29□□□□□ -0.44
CDH11-206ENST00000562998 KRTAP10-1P60331 282 aa12.29□□□□□ -0.44
CDH11-206ENST00000562998 REG3AQ06141 175 aa12.29□□□□□ -0.44
CDH11-206ENST00000562998 KRTAP17-1Q9BYP8 105 aa12.29□□□□□ -0.44
CDH11-206ENST00000562998 TRBV24-1A0A075B6N3 115 aa12.28□□□□□ -0.44
CDH11-206ENST00000562998 LECT2O14960 151 aa12.28□□□□□ -0.44
CDH11-206ENST00000562998 S100A8P05109 93 aa12.28□□□□□ -0.44
CDH11-206ENST00000562998 CLPSL2Q6UWE3 100 aa12.28□□□□□ -0.44
CDH11-206ENST00000562998 IGLV5-52A0A0A0MRZ9 124 aa12.27□□□□□ -0.45
CDH11-206ENST00000562998 UBE2L6O14933 153 aa12.27□□□□□ -0.45
CDH11-206ENST00000562998 GCSHP23434 173 aa12.27□□□□□ -0.45
CDH11-206ENST00000562998 SUMO2P61956 95 aaKnown RBP12.27□□□□□ -0.45
CDH11-206ENST00000562998 SEC11CQ9BY50 192 aa12.27□□□□□ -0.45
CDH11-206ENST00000562998 TMEM242Q9NWH2 141 aa12.27□□□□□ -0.45
CDH11-206ENST00000562998 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.26□□□□□ -0.45
CDH11-206ENST00000562998 IGKV2-29A2NJV5 120 aaPredicted RBP12.26□□□□□ -0.45
CDH11-206ENST00000562998 F8W036 122 aa12.26□□□□□ -0.45
CDH11-206ENST00000562998 VCYO14598 125 aa12.26□□□□□ -0.45
CDH11-206ENST00000562998 RPL32P62910 135 aaKnown RBP12.26□□□□□ -0.45
CDH11-206ENST00000562998 COMMD7Q86VX2 200 aa12.26□□□□□ -0.45
CDH11-206ENST00000562998 TRAV8-4A0A0B4J246 113 aa12.25□□□□□ -0.45
CDH11-206ENST00000562998 C20orf78Q9BR46 151 aa12.25□□□□□ -0.45
CDH11-206ENST00000562998 DNAH8Q96JB1 4490 aa12.24□□□□□ -0.45
CDH11-206ENST00000562998 FGF6P10767 208 aa12.24□□□□□ -0.45
CDH11-206ENST00000562998 ZNF25P17030 456 aaPredicted RBP12.24□□□□□ -0.45
CDH11-206ENST00000562998 CKS2P33552 79 aa12.24□□□□□ -0.45
CDH11-206ENST00000562998 C10orf91Q5T1B1 145 aa12.24□□□□□ -0.45
CDH11-206ENST00000562998 IMMP2LQ96T52 175 aa12.24□□□□□ -0.45
CDH11-206ENST00000562998 TNFRSF6BO95407 300 aa12.23□□□□□ -0.45
CDH11-206ENST00000562998 PPBPP02775 128 aa12.23□□□□□ -0.45
CDH11-206ENST00000562998 XGP55808 180 aa12.23□□□□□ -0.45
CDH11-206ENST00000562998 MRPL52Q86TS9 123 aaKnown RBP12.23□□□□□ -0.45
CDH11-206ENST00000562998 D6R8Y8 96 aa12.22□□□□□ -0.45
CDH11-206ENST00000562998 PHOX2AO14813 284 aa12.22□□□□□ -0.45
CDH11-206ENST00000562998 PCLOQ9Y6V0 5065 aa12.21□□□□□ -0.45
CDH11-206ENST00000562998 IGLV10-54A0A075B6I4 117 aa12.21□□□□□ -0.45
CDH11-206ENST00000562998 NPYP01303 97 aa12.21□□□□□ -0.45
CDH11-206ENST00000562998 AMMECR1LQ6DCA0 310 aa12.21□□□□□ -0.45
CDH11-206ENST00000562998 BTF3L4Q96K17 158 aa12.21□□□□□ -0.45
CDH11-206ENST00000562998 CTDSP1Q9GZU7 261 aa12.21□□□□□ -0.45
CDH11-206ENST00000562998 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.2□□□□□ -0.46
CDH11-206ENST00000562998 C7orf77A4D0Y5 90 aa12.2□□□□□ -0.46
CDH11-206ENST00000562998 USP17L23D6RBM5 183 aa12.2□□□□□ -0.46
CDH11-206ENST00000562998 HLA-DQA1P01909 254 aa12.2□□□□□ -0.46
CDH11-206ENST00000562998 RNASEKQ6P5S7 137 aaKnown RBP12.2□□□□□ -0.46
CDH11-206ENST00000562998 KIR2DL4Q99706 377 aa12.2□□□□□ -0.46
CDH11-206ENST00000562998 CARHSP1Q9Y2V2 147 aaKnown RBP12.2□□□□□ -0.46
CDH11-206ENST00000562998 C14orf177Q52M58 125 aa12.19□□□□□ -0.46
CDH11-206ENST00000562998 SMIM2Q9BVW6 85 aa12.19□□□□□ -0.46
CDH11-206ENST00000562998 PRSS47A8MTI9 375 aa12.18□□□□□ -0.46
CDH11-206ENST00000562998 FCER1GP30273 86 aa12.18□□□□□ -0.46
CDH11-206ENST00000562998 TMEM136Q6ZRR5 245 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms